Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3418 518 4e-142 seq2762 360 2e-94 seq684 208 9e-49 seq2653 203 4e-47 seq2647 190 2e-43 seq3417 187 3e-42 seq1564 163 3e-35 seq2818 132 6e-26 seq1303 113 5e-20 seq2833 109 6e-19 >seq3418 Length=161897 Score = 518 bits (574), Expect = 4e-142 Identities = 707/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 577 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 636 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 637 GCACGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACGGAT 696 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || |||||||| || | |||||||||||| |||| |||||| | || || ||| Sbjct 697 TGGTTGAAATTGAAACCGTTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGTGAAC 756 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || ||| ||||| || | |||| ||||||||| | | ||||||||||| Sbjct 757 CAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTTGAAA 816 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | || ||||| ||||| || || ||||| || || || ||| Sbjct 817 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTT 876 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| ||||| | ||||| | ||| || || | ||||| ||||| ||| Sbjct 877 TCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 936 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 937 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 996 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| ||| || || || ||||| |||||||| ||||| || ||||| || Sbjct 997 CCAGCTACGCCTAACATATGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACA 1056 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | ||| || ||||||||||| ||||| || || |||||||||||||| || |||||| Sbjct 1057 ATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCCTGA 1116 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 || | |||||| | ||||| || ||| ||||| | || || ||||| || |||||| Sbjct 1117 CCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAGTATGCAACA 1176 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || | | | | |||||||||| | |||||||| Sbjct 1177 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 1236 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | | ||||||||| || || || |||||| Sbjct 1237 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCAT 1296 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||| | ||| |||||||| |||||||| ||||||| || ||||| || | Sbjct 1297 TCATCAACGGATGCCGCTTCCCAAATTGGGTAAAAGTGTAAACCTATAGCTGCAGAAGTC 1356 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || ||||||||||| || ||||| || || | | ||| || | || ||||| Sbjct 1357 GGAATAATAGCACCAGAGATAATATTGTTTCCGTAAAGCAGAGATCCAGAAACAGGTTCA 1416 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947 | || || || ||||| || ||||| || ||||| || || | || || ||| | | Sbjct 1417 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATAATAAATACA-GAAGT 1475 Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTT 125007 ||| || | ||| || ||||| | |||||||||||| |||| |||| | ||| | Sbjct 1476 TGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 1535 Query 125008 TGTTGATGTTACCCACTCACAGAA 125031 || |||| ||| | |||||| Sbjct 1536 AGTGCTGGTTATCCAGTTACAGAA 1559 Score = 376 bits (416), Expect = 3e-99 Identities = 706/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 35477 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 35418 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 35417 ATCTTGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 35358 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||| || || || || ||||| ||||| | || |||||||| || ||||| || || | Sbjct 35357 AGTTTCAAATTCAGGATCTTCCGCTGCCCGAATTTCTTGAGAAACGAAGTCATAGGCACG 35298 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || ||||| || | || | || |||| | ||| | || || || Sbjct 35297 TAGGTTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 35238 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 35237 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 35178 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || |||| ||| |||||||||||| || || || | || || Sbjct 35177 CCAAAAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAGC 35118 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| ||||||| | || || Sbjct 35117 GCGGAA---TGTAT-TTGCA-----CCATCACC------------GTCTTCAAATAAAGT 35079 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| || || | || | || || ||||| Sbjct 35078 ATTTTCTACGGTAGCACCATGAATAGCGCATAGCAAGGCAGCGCCCAATACACCGGCAAC 35019 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 35018 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAA 34959 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| ||||| || || || |||||||||| ||||||||| || Sbjct 34958 TCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGCGG 34899 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| |||| || | | || || || || | |||||||||||| || || || Sbjct 34898 ATAAATCAAGAATACAGAAACAAAAACAGCAATTGGACCAGAGAATGCGATGGCATTATA 34839 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||| | | ||| || || | ||| ||||| | | |||||||||||| ||||| Sbjct 34838 AGGCCGCAATTGAACAGATCGAGCAAGCTCGAATTGACGTAACATGAAACCTATTAGTCC 34779 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 34778 GAAAGCGCCGTGGAGAGCAACAAAAGTCCACAGACCCCCTAATTGACACCAACGAGTAAA 34719 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 34718 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGG 34659 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || |||||||| || || || | ||| ||| || | ||||| Sbjct 34658 AGTCGAAACTGCGGCAGTTAAGAAATTGCAACCTTCCAAATAGGAACTAGCCAATCCATG 34599 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || || ||||||||| || | | | ||| || Sbjct 34598 GGTATACCATGAAGTTACAAAGGTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGC 34539 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||| ||||| |||| || || ||||| || ||| |||||| Sbjct 34538 ACAAGGAAAGAGCAATAGACCGGACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCA 34479 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | | |||||| Sbjct 34478 GTCATCCATAGTATCAAA 34461 >seq2762 Length=458829 Score = 360 bits (398), Expect = 2e-94 Identities = 703/1038 (68%), Gaps = 22/1038 (2%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 60300 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 60359 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 60360 ATCTTGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 60419 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||| || || || || ||||| ||||| | || |||||||| || ||||| || || | Sbjct 60420 AGTTTCAAATTCAGGATCTTCCGCTGCCCG-ATTTCTTGAGAAACGAAGTCATAGGCACG 60478 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || ||||| || | || | | |||| | ||| | || || || Sbjct 60479 TAGGTTCAGGGCCAGACCGACTACTCCAAGAACACTCATCCATAAACCGGTTACTGGTAC 60538 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 60539 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 60598 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || |||| ||| |||||||||||| || || || | || || Sbjct 60599 CCAAAAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAGC 60658 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| ||||||| | || || Sbjct 60659 GCGGAA---TGTAT-TTGCA-----CCATCACC------------GTCTTCAAATAAAGT 60697 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| || || | || | || || ||||| Sbjct 60698 ATTTTCTACGGTAGCACCATGAATAGCGCATAGCAAGGCAGCGCCCAATACACCGGCAAC 60757 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||||| |||||||| || || || ||||| | || | ||| | Sbjct 60758 TCCCATCATATGAAATGAGTTCAATGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAA 60817 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| ||||| || || || |||||||||| ||||||||| || Sbjct 60818 TCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGCGG 60877 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| |||| || | | || || || || | |||||||||||| || || || Sbjct 60878 ATAAATCAAGAATACAGAAACAAAAACAGCAATTGGACCAGAGAATGCGATGGCATTATA 60937 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 | | | | ||| || || | ||| ||||| | | |||||||||||| ||||| Sbjct 60938 AAGCCGCAATTGAACAGATCGAGCAAGCTCGAATTGACGTAACATGAAACCTATTAGTCC 60997 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 60998 GAAAGCGCCGTGGAGAGCAACAAAAGTCCACAGACCCCCTAATTGACACCAACGAGTAAA 61057 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 61058 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGG 61117 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || |||||||| || || || | ||| ||| || | ||||| Sbjct 61118 AGTCGAAACTGCGGCAGTTAAGAAATTGCAACCTTCCAAATAGGAACTAGCCAATCCATG 61177 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || || ||||||||| || | | | ||| || Sbjct 61178 GGTATACCATGAAGTTACAAAGGTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGC 61237 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||| ||||| |||| || || ||||| || ||| |||||| Sbjct 61238 ACAAGGAAAGAGCAATAGACCGGACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCA 61297 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | | |||||| Sbjct 61298 GTCATCCATAGTATCAAA 61315 >seq684 Length=2855409 Score = 208 bits (230), Expect = 9e-49 Identities = 357/518 (69%), Gaps = 0/518 (0%) Strand=Plus/Minus Query 123271 GTCTTCATACAATGTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACC 123330 ||||||| | || || || | || || ||||||||||| || ||||| || || | || Sbjct 2854399 GTCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATAGCGCATAGCAAGGCAGCGCC 2854340 Query 123331 TAGTATTCCTGCAACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTG 123390 | || || ||||| |||||||| |||||||| |||||||| || || || ||||| Sbjct 2854339 CAATACACCGGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTG 2854280 Query 123391 TATGAATAAGATATAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACT 123450 | || | ||| | ||||| || ||||| ||||| || || || |||||||||| Sbjct 2854279 AAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACC 2854220 Query 123451 GTGCTGACCTAGTGGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAA 123510 ||||||||| ||||| |||| || | | || || || || | ||||||| Sbjct 2854219 AGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAAACAGCAATTGGACCAGAGAA 2854160 Query 123511 TGCGAGTGCGTTGTAAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCAT 123570 ||||| || || ||||| | | ||| || || | ||| ||||| | | ||| Sbjct 2854159 TGCGATGGCATTATAAGGCCGCAATTGAACAGATCGAGCAAGCTCGAATTGACGTAACAT 2854100 Query 123571 GAAACCTATGAGTCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTG 123630 ||||||||| ||||| || | || || | || ||||| |||| ||||| || | ||| Sbjct 2854099 GAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAAAGTCCACAGACCCCCTAATTG 2854040 Query 123631 TAACCAACGAACGAATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACC 123690 |||||||| || ||||||||||||||| ||||| || |||| | | ||| | Sbjct 2854039 ACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGC 2853980 Query 123691 CATTGCGTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGA 123750 | | | |||| || || ||||| || |||||||| || || || | ||| || Sbjct 2853979 TAAACTATTAGCAGGAGTCGAAACTGCGGCAGTTAAGAAATTGCAACCTTCCAAATAGGA 2853920 Query 123751 AGATGCAATACCATGTGTATACCATGATGTAACGAAGG 123788 | || | ||||| ||||||||||| || || |||| Sbjct 2853919 ACTAGCCAATCCATGGGTATACCATGAAGTTACAAAGG 2853882 >seq2653 Length=4899193 Score = 203 bits (224), Expect = 4e-47 Identities = 279/390 (72%), Gaps = 9/390 (2%) Strand=Plus/Minus Query 124277 GAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACT 124336 ||||||||||| |||||| || ||||| | || ||||| ||||| || || ||||| Sbjct 3225820 GAGTTGTTGAAACTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTACG 3225761 Query 124337 ATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCT 124396 || || || |||||||| ||||| ||||| | ||||| | ||| | || | ||| Sbjct 3225760 ATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCATATTCATTTTCT 3225701 Query 124397 GTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGAT 124456 || ||||| |||| | | ||| || || | ||||||||||| || ||||| || Sbjct 3225700 GTGGTTTCCTTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAG 3225641 Query 124457 CCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCA--------TTAGAATGT 124508 || ||||| | || ||||| ||| ||| || || || |||| | ||||||| Sbjct 3225640 CCGCCGAATACACCAGCTACGCCTAACATATGAAATGGGTGCATAAGAAATTAAGAATGT 3225581 Query 124509 TATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATAC 124568 | |||| || ||||| || | ||| || ||||||||||| ||||| || || ||||||| Sbjct 3225580 TGTGCTTAGCCTGGAATACAATCATGAA-TTGAAAGTACCAGAGATTCCTAGAGGCATAC 3225522 Query 124569 CATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATA 124628 ||||||| || |||||||| | |||||| | ||||| || ||| ||||| | | Sbjct 3225521 CATCAGAAAAACTTCCCTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAA 3225462 Query 124629 CTGGTGCTGAATAAGCAACACAGATCCAAG 124658 | || ||||| || |||||| ||||||| Sbjct 3225461 CAGGAGCTGAGTATGCAACAGCAATCCAAG 3225432 >seq2647 Length=4788780 Score = 190 bits (210), Expect = 2e-43 Identities = 289/409 (71%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 124205 GTGCAGATACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAG 124264 |||| |||||| | || || ||||| | || | | ||| | || | |||| ||||||| Sbjct 734076 GTGCTGATACCTAAAGCAGTGAACCAGATACCTGCTACAAGCCAAGCAGCTAAGAAGAAG 734135 Query 124265 TGAAGACTTCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCG 124324 || | | ||||||||||| |||||| | |||||| | || ||||| ||||| Sbjct 734136 TGTAACGAACGAGAGTTGTTGAAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCA 734195 Query 124325 TGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGT 124384 || | |||| || || || | | |||| ||||| ||||| || ||||| | ||| Sbjct 734196 TGAACAACTACGATATTATAAGGT-CTTCCTCTTGACCGAATTTGTAACCTTCGTTAGCA 734254 Query 124385 GACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCT 124444 || || | | | | ||||| ||||| | | ||| | || | ||||||||||| | Sbjct 734255 GATTCATTTTTTTTGGTTTCCCTGATCAAACTAGAAATTACCAAGGAACCATGCATAACA 734314 Query 124445 GAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGA 124504 ||||| || || ||||| | | ||||| ||| ||| ||||| || ||||| ||| Sbjct 734315 CTGAATAGGGAGCCGCCGAATACACTAGCTACGCCTATCATATGGAATGGGTGCATAAGA 734374 Query 124505 ATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGC 124564 ||||| ||||| | ||||| || | ||| || |||||||||| ||||| || || ||| Sbjct 734375 ATGTTGTGCTCAACCTGGAATACAATCATGAAATTGAAAGTACTAGAGATTCCTAGAGGC 734434 Query 124565 ATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAG 124613 ||||||||||| || ||||| || | |||||| | |||||| |||| Sbjct 734435 ATACCATCAGAAAAACTTCCCTGGCCGATTGGGTAGA-TAAGAAAACAG 734482 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| |||||||| | ||||| | ||||||||||||||||||||| | ||| Sbjct 733599 GCTAGGTCTAGAGGGAAGTTACGAGCATTACATTCATGCATAACTTCCATACCAAGGTTA 733658 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || ||| | | |||| |||| || | | || | | ||||| || ||| Sbjct 733659 GCATGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAATTACAGAT 733718 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212 ||||| || |||||||| || | |||||||||||| || | ||| Sbjct 733719 TGGTTGAAATTGAAACCGTTTAGGTTGAATGCCATAGTACTGAT 733762 >seq3417 Length=265768 Score = 187 bits (206), Expect = 3e-42 Identities = 233/317 (74%), Gaps = 2/317 (1%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 155895 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 155954 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGC-ATCAACAACTGA 124167 || | ||| | | |||| |||| || | | || || || |||||| || || Sbjct 155955 GCACGGTTAATGATATCAGCCCAAGTCTTAATTACGCGGCC-TTGGCTATCAACTACGGA 156013 Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227 |||||| || || ||||||| | |||||||||||| |||| |||||| | || || || Sbjct 156014 TTGGTTGAAATTTCAACCATTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGTGAA 156073 Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAA 124287 ||| | || || ||||| || | |||| ||||||||| | | ||||||||||| Sbjct 156074 CCAGATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTTGAA 156133 Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347 |||||| |||||||| | || ||||| ||| || || ||||| || || || || Sbjct 156134 ACTAGCATATTGGAAGATCAATCGGCCAAAATAATTATGAGCAGCTACGATATTATAAGT 156193 Query 124348 TTCTTCTTCTTGTCCGA 124364 || ||| ||||| |||| Sbjct 156194 TTATTCCTCTTGACCGA 156210 >seq1564 Length=1404973 Score = 163 bits (180), Expect = 3e-35 Identities = 262/374 (70%), Gaps = 2/374 (1%) Strand=Plus/Plus Query 124619 GCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTAT 124678 ||||| | || || ||||| || |||||| |||||||| ||||| || | | | | Sbjct 140809 GCAGCTGCAACAGGAGCTGAGTATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAA 140868 Query 124679 GATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACC 124738 |||||||||| | |||||||| | | ||||| | |||||| | || | Sbjct 140869 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATT 140928 Query 124739 AACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGG 124798 | | ||||||||| || || || |||||||||||||| | ||| |||||||| |||||| Sbjct 140929 AGTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCCGCTTCCCAAATTGGG 140988 Query 124799 TAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTA 124858 || ||||||| | ||||| || | |||| || ||||||||||| || ||||| Sbjct 140989 TAAAAGTGTAAACTTATAGCTGCAGAAGTCGGAATAATAGCACCAGAGATAATATTGTTC 141048 Query 124859 CCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCT 124918 || || | | ||| || | || ||||| | || || || ||||| || ||||| || Sbjct 141049 CCGTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCA 141108 Query 124919 GCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAAC 124977 ||||| || || | || || ||| | | ||| || | ||| || ||||| | ||| Sbjct 141109 GCAATGAAGGCTATAATAAATACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAAC 141167 Query 124978 ACCAAACCAACCAA 124991 ||||||||| |||| Sbjct 141168 ACCAAACCATCCAA 141181 >seq2818 Length=3145313 Score = 132 bits (146), Expect = 6e-26 Identities = 166/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| || ||||| || || |||| ||||||||||| ||||| || Sbjct 1205618 TGAGCAGTGCAAATGTTGCTTGTTGCCTTATCCCTTCGGATATGCTGCTCCCTAGTCTGC 1205677 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | ||| | || ||||| || || | || ||||||| ||| | |||||| | Sbjct 1205678 ATTGCCATTCGCAGAGCAGGGTTCCCCGAGGAATCAACACTGAC--ACCAATAATTCTCC 1205735 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| ||||||| |||| | | ||| || ||||| ||||||||||||||||| | Sbjct 1205736 CGGGCATCATTCTCTTGTACTCTTGGGATGTGGCCAAGAAAGCAGCATGAGGACCTCCAT 1205795 Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | |||||||||| ||||||||| || ||| ||| ||||||| Sbjct 1205796 AACCCATAGGAACACCAAACCTCTGAGCTGAACCGACAACAATATC 1205841 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||||||||| || ||||| | ||||| || | |||||| || || || || || || Sbjct 1206157 CATTGCCTCTGCCGCAGCAGTGCCCTCATCCAACAAAGATGCATTGGCCATGGGCAAACC 1206216 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| ||||| || | || || ||||| | || | || | | || || || | Sbjct 1206217 GGTAAGATCTGTAATCATGGTCTGATAATTTAGCAAGGACTCAAGACGGCCTTGCGAAAC 1206276 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 |||||| || |||||||| || || ||||||| || || || | ||| || | | | Sbjct 1206277 CTCAGCCTGGTAGGGAGTATACTGAGTATACCAACCCGGGTTTTCCATAACATTCCTCAG 1206336 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 || || || || || ||| |||||| || Sbjct 1206337 GATCACAGGAGGCACAAAGGTATTATAGTACCC 1206369 >seq1303 Length=964456 Score = 113 bits (124), Expect = 5e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| |||||||| || | |||||||||||| ||||| || Sbjct 91032 TGGGCAGTGCAAATGTTGCTGGTAGCTTTGTCCCTACGAATATGCTGCTCCCTAGTCTGC 90973 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCT--ACAATTCTGC 139434 | ||| | | ||||| || || | || || ||| ||| | ||| || | Sbjct 90972 ATTGCCATACGCAGAGCAGGCTTCCCAGAGGAATCAAC--ACTAACCCCAATAATCCTTC 90915 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| |||||||||||| | || ||| || ||||| |||||||| || ||||| | Sbjct 90914 CCGGCATCATTCTCTTATACTCTTGTGATGTAGCCAAGAAGGCAGCATGGGGTCCTCCAT 90855 Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519 | ||||| |||| |||||||| || Sbjct 90854 ACCCCATGGGAACCCCAAACCTCTG 90830 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||| || |||||||||||||| | ||||||||| || || || Sbjct 94615 TAAAAATGGTGCCAAATGCTTCTTCACACCAATAGGACCCATGCCAGGACCGCCTCCACC 94556 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 || ||||| ||||||||||| || | ||||||||| || ||||| |||||| Sbjct 94555 GTGAGGAATGCAGAATGTCTTGTGGAGATTTAGATGGCAAACATCGGCACCA 94504 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||||||||| ||||| || || |||| ||||||||||| ||||| | || || | || Sbjct 90493 CATTGCCTCAGCTGCGGCGGTGCCTTCGTCTAATAGAGAGGCGTTGGACATGGGGAGACC 90434 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || ||||| || | || ||| |||| | | | ||||| | ||||| || || Sbjct 90433 TGTGAGGTCTGTAATCATGGTCTGGAAATTTAGCAGGGATTCCAGGCGGCCCTGGGAGAT 90374 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| || || || || ||||| |||||||| | || || || | | ||||| | Sbjct 90373 CTCGGCCTGGTATGGGGTGTATTGGGTGTACCAGCCGGGGTTTTCCATGATGTTTCTTAG 90314 Query 140039 TATGACTGGGGG 140050 || |||||||| Sbjct 90313 GATTACTGGGGG 90302 >seq2833 Length=2661255 Score = 109 bits (120), Expect = 6e-19 Identities = 213/315 (68%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 123271 GTCTTCATACAATGTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACC 123330 ||||||| | || || || | || || ||||||||||| || |||| || || | || Sbjct 1209465 GTCTTCAAATAAAGTATTTTATACGGTAGCACCATGAATAGCGCATACCAAGGCAGCGCC 1209406 Query 123331 TAGTATTCCTGCAACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTG 123390 | || | |||| |||||||| |||||||| |||||||| || || || ||||| Sbjct 1209405 CAATACACTGACAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTG 1209346 Query 123391 TATGAATAAGATATAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACT 123450 | || | ||| | ||||| || ||||| ||||| || | || |||||||||| Sbjct 1209345 AAAAAAAAGGATGAATCGAAATATAGCTGCTACACCAAAACTAAGCGCAAAGAACCAACC 1209286 Query 123451 GTGCTGACCTAGTGGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAA 123510 ||||||||| ||||| |||| || | | || || || || | ||||||| Sbjct 1209285 AGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAAACAGCAATTGAACCAGAGAA 1209226 Query 123511 TGCGAGTGCGTTGTAAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCAT 123570 ||||| | || ||||| | | ||| || || | ||| ||||| | | ||| Sbjct 1209225 TGCGATGACATTATAAGGCCGCAATTGAACAGATCGAGCAAGCTCGAATTGACGTAACAT 1209166 Query 123571 GAAACCTATGAGTCC 123585 | ||||||| ||||| Sbjct 1209165 GGAACCTATTAGTCC 1209151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578973662293360