Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3418 572 2e-158 seq2762 470 2e-127 seq684 307 1e-78 seq2647 221 2e-52 seq2653 212 8e-50 seq1564 208 1e-48 seq3417 185 1e-41 seq2833 167 3e-36 seq2036 100 4e-16 seq1029 87.8 2e-12 >seq3418 Length=161897 Score = 572 bits (634), Expect = 2e-158 Identities = 722/989 (73%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || ||||| || || | ||| || || || || | ||||| Sbjct 573 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 632 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 ||||||||| | | || |||||||| || | ||||| || || ||||| || Sbjct 633 GTTAGCACGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTAC 692 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 || || ||||| ||||||||||| || ||||| ||||| ||| | ||| | || || Sbjct 693 GGATTGGTTGAAATTGAAACCGTTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGT 752 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 ||||||||| || || || ||||| ||||| | ||||||||| || ||||| |||||||| Sbjct 753 GAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 812 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 ||| |||||||||||||||||| || || || || ||||| || || ||||| || || Sbjct 813 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATA 872 Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089 || ||||| ||||||||||| | ||||| | ||| || ||| |||| || || || Sbjct 873 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTC 932 Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149 | || | ||| || |||| || ||||||||| ||| || || || ||||| Sbjct 933 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 992 Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209 ||| ||||| || || | ||| || || ||||||||||| || ||||| || |||||||| Sbjct 993 TACACCAGCTACGCCTAACATATGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAA 1052 Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269 ||||| |||| | || |||||||||||||| || ||||||||| |||| || ||| || Sbjct 1053 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 1112 Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329 ||||||| || |||| | ||| ||||| | ||||| || || ||||| || ||||| Sbjct 1113 CTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAGTATGC 1172 Query 27330 TACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATA 27389 ||| ||||| || |||||||| | ||| | |||||||||||||| ||||| || Sbjct 1173 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 1232 Query 27390 AGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAA 27449 | | | || | | |||||| | || | |||| ||||||| ||||| || || Sbjct 1233 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAA 1292 Query 27450 CCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGA 27509 ||| ||||| | ||||| |||||||| |||||||| ||||| | ||| || || || Sbjct 1293 CCATTCATCAACGGATGCCGCTTCCCAAATTGGGTAAAAGTGTAAACCTATAGCTGCAGA 1352 Query 27510 ACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGG 27569 | | || | || |||||||| || || ||||| || || | || || |||| ||| || Sbjct 1353 AGTCGGAATAATAGCACCAGAGATAATATTGTTTCCGTAAAGCAGAGATCCAGAAACAGG 1412 Query 27570 TTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGA 27628 |||||||||||| |||||||| || || || || || ||||| || | ||| || |||| Sbjct 1413 TTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATAATAAATACAGA 1472 Query 27629 CAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGT 27688 |||||| | || | || |||||||||| ||||| ||||| |||| || | ||||| Sbjct 1473 -AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 1531 Query 27689 TGTTAGTTGATGTCACCCACTCACAGAAA 27717 | | ||| || | ||| | ||||||| Sbjct 1532 TTTCAGTGCTGGTTATCCAGTTACAGAAA 1560 Score = 491 bits (544), Expect = 6e-134 Identities = 718/1010 (71%), Gaps = 4/1010 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 35478 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 35419 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 35418 GATCTTGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 35359 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | || ||| | | |||||| || || ||||| |||||| || || ||||| |||| Sbjct 35358 AAGTTTCAAATTCAGGATCTTCCGCTGCCCGAATTTCTTGAGAAACGAAGTCATAGGCAC 35299 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || || || || || | | |||| || | | ||| | ||| | || || | Sbjct 35298 GTAGGTTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 35239 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 35238 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 35179 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || |||||||| ||||| || || || ||||| | | || | Sbjct 35178 ACCAAAAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAG 35119 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || || |||||| | | ||||| || || ||| | |||| Sbjct 35118 CGCGGAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 35059 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || | || | |||| || ||| ||||||||||||||||| || |||| Sbjct 35058 GAATAGCGCATAGCAAGGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGT 34999 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || || | ||||| | ||| | || || || || |||| Sbjct 34998 TCAATGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 34939 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| ||||| || | ||||| || | ||||||||| | Sbjct 34938 CAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAA 34879 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 34878 CAAAAACAGCAATTGGACCAGAGAATGCGATGGCATTATAAGGCCGCAATTGAAC-AGAT 34820 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || || || || ||||||||||| |||||||| ||| | || || |||||||||||| Sbjct 34819 CGAGCAAGCTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCA 34760 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 34759 ACAAAAGTCCACAGACCCCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 34700 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGT- 24223 ||||| |||| | | |||||| | | | | |||||| ||||| || || || || Sbjct 34699 CCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTT 34640 Query 24224 AAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAAC 24283 |||||| || ||| || | |||||||||||| | ||||||||| ||||| || || Sbjct 34639 AAGAAA-TTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCATGAAGTTAC 34581 Query 24284 AAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAG 24343 ||| | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 34580 AAAGGTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAG 34521 Query 24344 TCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCA 24393 || ||||| || ||||| || || || |||| | |||||| |||| Sbjct 34520 ACCGGACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCA 34471 >seq2762 Length=458829 Score = 470 bits (520), Expect = 2e-127 Identities = 714/1010 (71%), Gaps = 5/1010 (0%) Strand=Plus/Plus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 60299 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 60358 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 60359 GATCTTGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 60418 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | || ||| | | |||||| || || ||| | |||||| || || ||||| |||| Sbjct 60419 AAGTTTCAAATTCAGGATCTTCCGCTGCCCGATT-TCTTGAGAAACGAAGTCATAGGCAC 60477 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || || || || || | | |||| | | | ||| | ||| | || || | Sbjct 60478 GTAGGTTCAGGGCCAGACCGACTACTCCAAGAACACTCATCCATAAACCGGTTACTGGTA 60537 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 60538 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 60597 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || |||||||| ||||| || || || ||||| | | || | Sbjct 60598 ACCAAAAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAG 60657 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || || |||||| | | ||||| || || ||| | |||| Sbjct 60658 CGCGGAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 60717 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || | || | |||| || ||| ||||||||||||||||| || | || Sbjct 60718 GAATAGCGCATAGCAAGGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAATGAGT 60777 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || || | ||||| | ||| | || || || || |||| Sbjct 60778 TCAATGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 60837 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| ||||| || | ||||| || | ||||||||| | Sbjct 60838 CAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAA 60897 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || | || | | || ||| Sbjct 60898 CAAAAACAGCAATTGGACCAGAGAATGCGATGGCATTATAAAGCCGCAATTGAA-CAGAT 60956 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || || || || ||||||||||| |||||||| ||| | || || |||||||||||| Sbjct 60957 CGAGCAAGCTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCA 61016 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 61017 ACAAAAGTCCACAGACCCCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 61076 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-T 24223 ||||| |||| | | |||||| | | | | |||||| ||||| || || || | | Sbjct 61077 CCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTT 61136 Query 24224 AAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAAC 24283 |||||| || ||| || | |||||||||||| | ||||||||| ||||| || || Sbjct 61137 AAGAAA-TTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCATGAAGTTAC 61195 Query 24284 AAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAG 24343 ||| | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 61196 AAAGGTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAG 61255 Query 24344 TCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCA 24393 || ||||| || ||||| || || || |||| | |||||| |||| Sbjct 61256 ACCGGACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCA 61305 >seq684 Length=2855409 Score = 307 bits (340), Expect = 1e-78 Identities = 378/511 (74%), Gaps = 4/511 (1%) Strand=Plus/Minus Query 23766 TCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCT 23825 || || |||||| | | ||||| || || ||| | ||||||||||| | || | || Sbjct 2854404 TCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATAGCGCATAGCAAGGCA 2854345 Query 23826 CCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAG 23885 | |||| || ||| ||||||||||||||||| || ||||| | ||||| |||||||| Sbjct 2854344 GCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAAC 2854285 Query 23886 CCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAAC 23945 || || | ||||| | ||| | || || || || ||||| ||||| |||||||||||| Sbjct 2854284 CCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAAC 2854225 Query 23946 CAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCA 24005 ||| ||||| || | ||||| || | ||||||||| || || |||||||| |||||| Sbjct 2854224 CAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAAACAGCAATTGGACCA 2854165 Query 24006 GAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACG 24064 || || || || ||||| || || || | | || ||| || || || || || ||||| Sbjct 2854164 GAGAATGCGATGGCATTATAAGGCCGCAATTGAAC-AGATCGAGCAAGCTCGAATTGACG 2854106 Query 24065 TAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCC 24124 |||||| |||||||| ||| | || || ||||||||||||||||| | ||| || || || Sbjct 2854105 TAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAAAGTCCACAGACCCCC 2854046 Query 24125 AAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGA 24184 | ||| ||| || ||| || ||||| | ||||||||||| |||| | | ||| Sbjct 2854045 TAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGA 2853986 Query 24185 ATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGT-AAGAAAGTTAGCACCCTCAA 24243 ||| | | | | |||||| ||||| || || || || |||||| || ||| || | Sbjct 2853985 ATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTTAAGAAA-TTGCAACCTTCCA 2853927 Query 24244 GATAGGAACTAGCAAGTCCATGGGTGTACCA 24274 |||||||||||| | ||||||||| ||||| Sbjct 2853926 AATAGGAACTAGCCAATCCATGGGTATACCA 2853896 >seq2647 Length=4788780 Score = 221 bits (244), Expect = 2e-52 Identities = 279/382 (73%), Gaps = 1/382 (0%) Strand=Plus/Plus Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || ||||||||||| || | || |||| ||||| | ||||||||| || ||||| ||| Sbjct 734091 GCAGTGAACCAGATACCTGCTACAAGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAG 734150 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||| ||||||||| || || || || ||||| | | ||||| Sbjct 734151 TTGTTGAAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCATGAACAACTACGATA 734210 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || || | ||||| ||||||||||| || ||||| | ||| || ||| ||| | Sbjct 734211 TTATAAGG-TCTTCCTCTTGACCGAATTTGTAACCTTCGTTAGCAGATTCATTTTTTTTG 734269 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| | |||| || |||||| || ||| || || || Sbjct 734270 GTTTCCCTGATCAAACTAGAAATTACCAAGGAACCATGCATAACACTGAATAGGGAGCCG 734329 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| | ||| || || | ||| ||||| ||||||||||| || ||||| || || Sbjct 734330 CCGAATACACTAGCTACGCCTATCATATGGAATGGGTGCATAAGAATGTTGTGCTCAACC 734389 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| |||| | || ||||||| |||||| || ||||||||| |||| || ||| Sbjct 734390 TGGAATACAATCATGAAATTGAAAGTACTAGAGATTCCTAGAGGCATACCATCAGAAAAA 734449 Query 27265 GAACCTTGACCGAAAGGATAGA 27286 || || |||| || |||| Sbjct 734450 CTTCCCTGGCCGATTGGGTAGA 734471 >seq2653 Length=4899193 Score = 212 bits (234), Expect = 8e-50 Identities = 280/388 (72%), Gaps = 9/388 (2%) Strand=Plus/Minus Query 26962 GAGTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACG 27021 ||||||||||| ||||||||| |||||||| || || || || ||||| || || ||| Sbjct 3225820 GAGTTGTTGAAACTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTACG 3225761 Query 27022 ATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCA 27081 || || || || ||||| ||||||||||| | ||||| | ||| | ||| |||| Sbjct 3225760 ATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCATATTCATTTTCT 3225701 Query 27082 GTCGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGAT 27141 || || || || | ||| || |||| || ||||||||| ||| || || Sbjct 3225700 GTGGTTTCCTTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAG 3225641 Query 27142 CCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCA--------TAAGGATAT 27193 || |||||||| ||||| || || | ||| || || ||||||| |||| || | Sbjct 3225640 CCGCCGAATACACCAGCTACGCCTAACATATGAAATGGGTGCATAAGAAATTAAGAATGT 3225581 Query 27194 TGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAG 27253 |||| | ||||||||||||| |||| | || |||||||||||||| || ||||||||| Sbjct 3225580 TGTGCTTAGCCTGGAATACAATCATG-AATTGAAAGTACCAGAGATTCCTAGAGGCATAC 3225522 Query 27254 CATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGA 27313 |||| || ||| || ||||||| || |||| | ||| ||||| | ||||| || | Sbjct 3225521 CATCAGAAAAACTTCCCTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAA 3225462 Query 27314 CTGGAGCAGAATATGCTACACAGATCCA 27341 | ||||| || ||||| ||| ||||| Sbjct 3225461 CAGGAGCTGAGTATGCAACAGCAATCCA 3225434 >seq1564 Length=1404973 Score = 208 bits (230), Expect = 1e-48 Identities = 284/394 (72%), Gaps = 2/394 (1%) Strand=Plus/Plus Query 27295 ACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCT 27354 ||||| | ||||| || || ||||| || ||||| ||| ||||| || |||||||| Sbjct 140800 ACTGCGGTAGCAGCTGCAACAGGAGCTGAGTATGCAACAGCAATCCAAGGGCGCATACCC 140859 Query 27355 AAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCATAGATGCCGATAAGGAAGTGG 27414 | ||| | |||||||||||||| ||||| ||| | | || | | |||||| Sbjct 140860 AGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGT 140919 Query 27415 AAGACTACCAGTTGGAAAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCC 27474 | || | |||| ||||||| ||||| || ||||| ||||| | ||||| |||||| Sbjct 140920 AGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCCGCTTCC 140979 Query 27475 CAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATG 27534 || |||||||| ||||| | || || || ||| | || | || |||||||| || Sbjct 140980 CAAATTGGGTAAAAGTGTAAACTTATAGCTGCAGAAGTCGGAATAATAGCACCAGAGATA 141039 Query 27535 ATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACG 27594 || ||||| || || | || || |||| ||| |||||||||||||| |||||||| || Sbjct 141040 ATATTGTTCCCGTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACT 141099 Query 27595 GGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGAT 27653 || || || || ||||| || | ||| || |||| |||||| | || | || ||||| Sbjct 141100 GGAGGAGCAGCAATGAAGGCTATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGAT 141158 Query 27654 CATCAGTACACCGAACCAACCAACATACAAACGG 27687 ||||| ||||| ||||| |||| | | ||||| Sbjct 141159 CATCAAAACACCAAACCATCCAATGTGCTAACGG 141192 >seq3417 Length=265768 Score = 185 bits (204), Expect = 1e-41 Identities = 233/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || ||||| || || | ||| || || || || | ||||| Sbjct 155891 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 155950 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 ||||||||| | | || |||||||| || | || || || || ||||| || Sbjct 155951 GTTAGCACGGTTAATGATATCAGCCCAAGTCTTAATTACGCGGCCTTGGCTATCAACTAC 156010 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 || || ||||| || |||| || || ||||| ||||| ||| | ||| | || || Sbjct 156011 GGATTGGTTGAAATTTCAACCATTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGT 156070 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 ||||||||| || || || ||||| ||||| | ||||||||| || ||||| |||||||| Sbjct 156071 GAACCAGATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 156130 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 ||| |||||||||||||||||| || || || || ||| || || ||||| || || Sbjct 156131 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAATTATGAGCAGCTACGATATTATA 156190 Query 27030 GGTCTCTTCTTCTTGACCGA 27049 || | ||| |||||||||| Sbjct 156191 AGTTTATTCCTCTTGACCGA 156210 >seq2833 Length=2661255 Score = 167 bits (184), Expect = 3e-36 Identities = 230/319 (72%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 23766 TCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCT 23825 || || |||||| | | ||||| | || ||| | ||||||||||| | | | || Sbjct 1209470 TCACCGTCTTCAAATAAAGTATTTTATACGGTAGCACCATGAATAGCGCATACCAAGGCA 1209411 Query 23826 CCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAG 23885 | |||| || || |||||||||||||||| || ||||| | ||||| |||||||| Sbjct 1209410 GCGCCCAATACACTGACAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAAC 1209351 Query 23886 CCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAAC 23945 || || | || || | ||| | || || || || ||||| ||||| ||||||||||| Sbjct 1209350 CCTTGAAAAAAAAGGATGAATCGAAATATAGCTGCTACACCAAAACTAAGCGCAAAGAAC 1209291 Query 23946 CAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCA 24005 ||| ||||| || | ||||| || | ||||||||| || || |||||||| | |||| Sbjct 1209290 CAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAAACAGCAATTGAACCA 1209231 Query 24006 GAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACG 24064 || || || || |||| || || || | | || ||| || || || || || ||||| Sbjct 1209230 GAGAATGCGATGACATTATAAGGCCGCAATTGAAC-AGATCGAGCAAGCTCGAATTGACG 1209172 Query 24065 TAACATAAAACCTATAAGT 24083 |||||| ||||||| ||| Sbjct 1209171 TAACATGGAACCTATTAGT 1209153 >seq2036 Length=7432206 Score = 100 bits (110), Expect = 4e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 27118 CCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 27177 || ||||||||| ||| |||| ||| ||||||| ||||| ||||| ||||| || || Sbjct 2690447 CCATGCATAGCACTGAATAGAGGGCCATCGAATACACCAGCTACACCTAGCATATGAAAT 2690506 Query 27178 GGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGT 27230 |||||| |||| || ||||| | ||||||||||||| |||| | || ||||| Sbjct 2690507 GGGTGCGTAAGAATGTTGTGCTTGGCCTGGAATACAATCATGAAATTGAAAGT 2690559 >seq1029 Length=16155 Score = 87.8 bits (96), Expect = 2e-12 Identities = 222/335 (66%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 23791 CGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCA 23850 |||| | | | ||| ||| ||| |||| | || | |||| | ||| ||||| |||| Sbjct 11563 CGACGGGAGCACCAGGAAGAGCGCAGAGCAAGGCAGCGCCCAAGACACCGGCAACGCCCA 11622 Query 23851 TCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGA 23910 || | | |||||| | | ||| | |||| || | | ||||| ||||| | | Sbjct 11623 GCAGAGGAAAGGGGGGCAAGGGCCAAGGAGGAAACCCGGGAAAAAAGAGGAGGAAGCGAA 11682 Query 23911 AAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGA 23970 | | || || ||||| |||| ||||||||||||||| ||| | || | ||| | | Sbjct 11683 AGAGAGCGGCGACACCAAAACGAGGCGCAAAGAACCAACCAGACGGACCGAGCGGAGAAA 11742 Query 23971 TGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGAC 24030 | ||| ||||| || || ||||||| |||||||| || || | ||| | || | Sbjct 11743 GCAAGAAGACAGAAACAAAAACAGCAAGGGGACCAGAGAAGGCGAGGGCAGGAGAAGGCC 11802 Query 24031 GGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAG 24089 | | || ||| || || || | || |||| |||| ||||| | || | || Sbjct 11803 GCAAGGGAA-CAGAGCGAGCAAGCGCGAAGGGACGGAACAGGAAACCGAGGAGGCCGAAA 11861 Query 24090 GCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCC 24124 || ||| ||||||||||||| | ||| || || || Sbjct 11862 GCGCCGGGGAGAGCAACAAAAGGCCACAGACCCCC 11896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665465966751760