Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq3418 580 2e-160 seq2762 439 4e-118 seq684 251 1e-61 seq3417 226 4e-54 seq1564 224 1e-53 seq2653 187 4e-42 seq2647 172 8e-38 seq2833 129 9e-25 >seq3418 Length=161897 Score = 580 bits (642), Expect = 2e-160 Identities = 703/952 (74%), Gaps = 4/952 (0%) Strand=Plus/Minus Query 174495 AATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACT 174554 || ||||||||| | || ||||| |||||| | ||||| ||||| || || |||||||| Sbjct 1532 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1473 Query 174555 GTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGA 174613 | ||| || ||||| || ||| | | |||||| ||||| || || || || || ||||| Sbjct 1472 -TCTGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1414 Query 174614 ACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAG 174673 ||| || |||| || || | || |||||||| || ||||||||||| || |||| | Sbjct 1413 ACCTGTTTCTGGATCTCTGCTTTACGGAAACAATATTATCTCTGGTGCTATTATTCCGAC 1354 Query 174674 TTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATG 174733 ||| || || ||| ||||||| |||||||| |||||||| || | | || ||||| Sbjct 1353 TTCTGCAGCTATAGGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATG 1294 Query 174734 GCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGC 174793 | | |||||||| ||||||| ||||| |||| | |||||| | ||||| | Sbjct 1293 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1234 Query 174794 CTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGT 174853 || ||||| |||||||||||||| || ||| | |||||| | |||||||| ||| Sbjct 1233 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 1174 Query 174854 AGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCA 174913 |||||||| || || |||||||| ||| | ||||| ||| | |||| || ||||||| Sbjct 1173 TGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCA 1114 Query 174914 AGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGT 174973 || || || || | ||||| | || |||||||| || ||||| | |||| | || Sbjct 1113 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGT 1054 Query 174974 CTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGT 175033 ||||| || || || ||||| | |||||||| || || ||||| || || || ||||| Sbjct 1053 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCATATGTTAGGCGTAGCTGGTGT 994 Query 175034 CTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTG-TCC 175092 ||||| || || | ||| || ||||||||||| |||| || || | ||| || Sbjct 993 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCA 935 Query 175093 GTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGA 175152 | || || || |||| ||| || ||| | ||||||| ||||| ||||| ||||| | Sbjct 934 GGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 875 Query 175153 CCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 175212 | ||||| ||||| || || ||||| || || || || |||||||||||||| ||| | Sbjct 874 CTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 815 Query 175213 TCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGT 175272 |||||||||| || || | |||||||||||||| || ||||| || || |||||||||| Sbjct 814 TCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 755 Query 175273 TCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGT 175332 |||| || | ||| | ||| |||||||||||||| || |||||||| |||||||| | Sbjct 754 TCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAAT 695 Query 175333 CTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTG 175392 | || | || | ||||| | ||| | || || ||||| ||| | ||||| | ||| Sbjct 694 CCGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTA 635 Query 175393 GTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444 ||||| |||||||| |||||||| | ||||| || |||||||| ||||| Sbjct 634 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 583 Score = 457 bits (506), Expect = 1e-123 Identities = 706/1008 (70%), Gaps = 0/1008 (0%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||| | |||| |||||| | | || || | || | ||| | |||||||| || | Sbjct 34463 TGATACTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCT 34522 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 34523 ATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGT 34582 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| |||||||| | ||| ||||||| | || ||| || || | || Sbjct 34583 AACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAAC 34642 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || |||||||||||| || | | | |||||| | | |||| |||||||| Sbjct 34643 TGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCC 34702 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 34703 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGC 34762 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || |||| || || || |||||| | ||||| || || || || || Sbjct 34763 TCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATC 34822 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| |||||| || ||||| ||||| Sbjct 34823 TGTTCAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTC 34882 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || | | || || |||||||| ||| ||||||||||| || |||||||| Sbjct 34883 TGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 34942 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 ||||| || ||| ||||| | | ||| |||| || || || || |||||| ||||||| Sbjct 34943 AGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCC 35002 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || ||||||||||||||||| ||| || | || | || | |||| || || ||||| Sbjct 35003 ATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGG 35062 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | ||| || |||||||| ||| |||||| || || || || ||| || || Sbjct 35063 TGCTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTT 35122 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || ||||| || ||||| ||||||||||| |||||||| ||||| || Sbjct 35123 TAACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCA 35182 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 35183 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 35242 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || || || || || ||||| Sbjct 35243 AGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGC 35302 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || ||||| ||| | ||||| ||||||||||| |||||||||||||| Sbjct 35303 CTATGACTTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTA 35362 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 ||| || || || || | |||||||| | | || |||||||| || ||||| || Sbjct 35363 CACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCC 35422 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 35423 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 35470 >seq2762 Length=458829 Score = 439 bits (486), Expect = 4e-118 Identities = 703/1008 (70%), Gaps = 1/1008 (0%) Strand=Plus/Minus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||| | |||| |||||| | | || || | || | ||| | |||||||| || | Sbjct 61313 TGATACTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCT 61254 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 61253 ATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGT 61194 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| |||||||| | ||| ||||||| | || ||| || || | || Sbjct 61193 AACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAAC 61134 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || |||||||||||| || | | | |||||| | | |||| |||||||| Sbjct 61133 TGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCC 61074 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 61073 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGC 61014 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || |||| || || || |||||| | ||||| || || || || || Sbjct 61013 TCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATC 60954 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || | || || || || |||||| |||||| || ||||| ||||| Sbjct 60953 TGTTCAATTGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTC 60894 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || | | || || |||||||| ||| ||||||||||| || |||||||| Sbjct 60893 TGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 60834 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 ||||| || ||| ||||| | | ||| |||| || || || || |||||| ||||| | Sbjct 60833 AGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTC 60774 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || ||||||||||||||||| ||| || | || | || | |||| || || ||||| Sbjct 60773 ATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGG 60714 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | ||| || |||||||| ||| |||||| || || || || ||| || || Sbjct 60713 TGCTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTT 60654 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || ||||| || ||||| ||||||||||| |||||||| ||||| || Sbjct 60653 TAACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCA 60594 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 60593 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 60534 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || || || || || ||||| Sbjct 60533 AGTAACCGGTTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGC 60474 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || ||||| | | | ||||| ||||||||||| |||||||||||||| Sbjct 60473 CTATGACTTCGTTTCTCAAGA-AATCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTA 60415 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 ||| || || || || | |||||||| | | || |||||||| || ||||| || Sbjct 60414 CACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCC 60355 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 60354 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 60307 >seq684 Length=2855409 Score = 251 bits (278), Expect = 1e-61 Identities = 361/509 (71%), Gaps = 0/509 (0%) Strand=Plus/Plus Query 175980 TGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCGGCT 176039 ||||| |||||||| | ||| ||||||| | || ||| || || | || || || Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCA 2853955 Query 176040 GTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAATCT 176099 || |||||||||||| || | | | |||||| | | |||| |||||||||||| | Sbjct 2853956 GTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 2854015 Query 176100 CAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGCTCTCCAC 176159 || || || || || ||| ||| | || || || ||| | ||||||||||||||| Sbjct 2854016 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCAC 2854075 Query 176160 GGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACTCATTGGT 176219 || || |||| || || || |||||| | ||||| || || || || || || Sbjct 2854076 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAA 2854135 Query 176220 ATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTT 176279 | || || || || || || |||||| |||||| || ||||| ||||| ||| || Sbjct 2854136 TTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 2854195 Query 176280 CTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGCA 176339 | | || || |||||||| ||| ||||||||||| || |||||||| ||||| Sbjct 2854196 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 2854255 Query 176340 ATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCCCTTCCAT 176399 || ||| ||||| | | ||| |||| || || || || |||||| ||||||| || ||| Sbjct 2854256 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 2854315 Query 176400 ATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGGCGTTACT 176459 |||||||||||||| ||| || | || | || | |||| || || ||||| | ||| Sbjct 2854316 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 2854375 Query 176460 GTTGAAAATACCCTATATGAAGATGGAGA 176488 || |||||||| ||| |||||| || || Sbjct 2854376 GTAGAAAATACTTTATTTGAAGACGGTGA 2854404 >seq3417 Length=265768 Score = 226 bits (250), Expect = 4e-54 Identities = 236/310 (76%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 175135 TCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGA 175194 |||| ||||| ||| | || ||||| ||||| || || ||| || || || || |||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 175195 TCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGC 175254 |||||||||| ||| ||||||||||| || || | |||||||||||||| || |||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 175255 CAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATG 175314 | || ||||||||||||||||| || | ||| | ||| |||||||||||||| |||| Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 175315 GTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGG 175374 ||| || |||||||| || || | || | ||||| | ||| | || || ||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 175375 ATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACT 175434 || | ||||| | ||| ||||| |||||||| |||||||| | ||||| || |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 175435 TCCCACTAGA 175444 |||| ||||| Sbjct 155910 TCCCTCTAGA 155901 >seq1564 Length=1404973 Score = 224 bits (248), Expect = 1e-53 Identities = 280/381 (73%), Gaps = 2/381 (1%) Strand=Plus/Minus Query 174510 GGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACTGTATGT-TTCATTAT 174568 || ||||| |||||| | ||||| ||||| || || |||||||| | ||| || ||||| Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 174569 CGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTC 174628 || ||| | | |||||| ||||| || || || || || |||||||| || |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 174629 ACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGG 174688 || | || || ||||| || ||||||||||| || |||| | ||| || || | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 174689 TCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGG 174748 | ||||||| |||||||| |||||||| || | | || |||||| | |||||||| || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 174749 TCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGA 174808 ||||| ||||| |||| | |||||| | ||||| | || ||||| ||||| Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 140881 Query 174809 GTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACC 174868 ||||||||| || ||| | |||||| | |||||||| ||| |||||||| || || Sbjct 140880 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCC 140821 Query 174869 AGTTGCAGCAGCTTCAGCAGT 174889 |||||||| ||| | ||||| Sbjct 140820 TGTTGCAGCTGCTACCGCAGT 140800 >seq2653 Length=4899193 Score = 187 bits (206), Expect = 4e-42 Identities = 280/392 (71%), Gaps = 13/392 (3%) Strand=Plus/Plus Query 174841 CTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCT 174900 ||||||| ||| |||||||| || || |||||||| ||| | ||||| ||| | ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 174901 ATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCA 174960 | || ||||||| || || || || | ||||| | || |||||||| || |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 174961 ACTACATGTTGGTCTTCCA-----AGCAGAACAT----AACATCTTGATGCACCCCTTCC 175011 | | |||| | || ||||| |||| ||||| || |||| |||||||| || | Sbjct 3225552 ATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTT-ATGCACCCATTTC 3225609 Query 175012 ACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCAC 175071 | ||||| || || || ||||| ||||| || || | ||| || ||||||||||| | Sbjct 3225610 ATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-C 3225668 Query 175072 TTGTTACCTCTTCACTTG-TCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTAC 175130 ||| || || | ||| || || || || |||| ||| | ||| | |||||| Sbjct 3225669 TTGGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTAC 3225728 Query 175131 AAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGT 175190 | ||||| ||||| ||||| || ||||| ||||| || || ||||| || || || || Sbjct 3225729 AGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGA 3225788 Query 175191 TTGATCTTCCAATACGCTTCATTCAACAACTC 175222 |||||||| ||||| ||| ||||||||||| Sbjct 3225789 TTGATCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq2647 Length=4788780 Score = 172 bits (190), Expect = 8e-38 Identities = 277/393 (70%), Gaps = 4/393 (1%) Strand=Plus/Minus Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947 || ||| || |||| || |||| || || || || || | ||||| | || ||| Sbjct 734480 GTTTTCTTA-TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 734422 Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007 ||| | || ||||| | |||| | || ||||| | || || ||||| | |||||||| Sbjct 734421 TCTAGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCA 734362 Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067 ||||| ||| | || || || |||| ||||| || || | ||| | ||||||||| Sbjct 734361 TTCCATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGT 734302 Query 175068 TCACTTGTTACCTCTTCACTTG-TCCGTGAGACAACTGAAACTGAGTCACAGAACTATGG 175126 || |||| || | | ||| || | || || | ||| ||| || ||| | || Sbjct 734301 TC-CTTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGG 734243 Query 175127 TTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGG 175186 |||||| ||||| ||||| ||||| | ||||| ||||| | | ||||| || || || Sbjct 734242 TTACAAATTCGGTCAAGAGGAAGAC-CTTATAATATCGTAGTTGTTCATGGTTATTTTGG 734184 Query 175187 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGC 175246 || ||||||||| |||| ||| ||||||||||| || || | |||||||||||||| Sbjct 734183 CCGATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGC 734124 Query 175247 CGCATGGCCAGTTGTGGGTATCTGGTTCACCGC 175279 || |||| || | |||||||||||||| || Sbjct 734123 TGCTTGGCTTGTAGCAGGTATCTGGTTCACTGC 734091 Score = 113 bits (124), Expect = 7e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 175293 ACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGT 175352 || |||||||||||||| || |||||||| |||||||| ||||| || || | ||||| Sbjct 733756 ACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAAGGC 733697 Query 175353 AGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATG 175412 | ||| | || || ||||| ||| | ||||| ||| ||||| |||||||| ||| Sbjct 733696 CGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTTATG 733637 Query 175413 CATGAGAGAAATGCACACAACTTCCCACTAGA 175444 ||||| | ||||| | |||||||| ||||| Sbjct 733636 CATGAATGTAATGCTCGTAACTTCCCTCTAGA 733605 >seq2833 Length=2661255 Score = 129 bits (142), Expect = 9e-25 Identities = 179/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 176238 ATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGT 176297 || |||||| |||| | || ||||| ||||| ||| || | | || || |||||| Sbjct 1209220 ATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTAGGT 1209279 Query 176298 CAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGCAATCTTTAGATTCCTATTG 176357 || ||| ||||||||||| | |||||||| ||||| || ||| ||||| | | Sbjct 1209280 CAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTT 1209339 Query 176358 TTTCTTCAGGGTTTCCACAACTGGACACTGAACCCCTTCCATATGATGGGAGTTGCTGGT 176417 ||| |||| || || || || |||||| ||||||| || |||||||||||||||| || Sbjct 1209340 TTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGTCAGT 1209399 Query 176418 ATACTAGGTGGAGCACTACTATCTGCAATCCATGGCGTTACTGTTGAAAATACCCTATAT 176477 || | || | || | ||| || || ||||| | ||| || ||||||| ||| | Sbjct 1209400 GTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATACTTTATTT 1209459 Query 176478 GAAGATGGAGA 176488 ||||| || || Sbjct 1209460 GAAGACGGTGA 1209470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729898413757840