Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq268 91.5 7e-14 >seq268 Length=6919517 Score = 91.5 bits (100), Expect = 7e-14 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 || ||| ||||| |||||||| || || | || || || || |||| | |||| Sbjct 1179235 TCTTGTGCCAAATTGACCATTAGGTTGGAAAAGGTTTATGTTATTGCTGCCAACATAATT 1179294 Query 65146 CTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 |||||||| || ||||| | | | ||||| |||||| ||||| ||| |||| || Sbjct 1179295 CTGAGCCAGGCCAATAATGGTACCCTGCAAACTTTGTTCACCATGATGGTATGCTGAGTG 1179354 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||||| ||||| ||| ||||||||||| ||| |||| | | || || | ||||| Sbjct 1179355 CTCAGAAACATACCCAGAGAATTGAGCAACCTTTGCTTCCTTGATGAAGTTTCTCTTAAA 1179414 Query 65266 TGCAGAATACAATATTTTCC 65285 ||| || ||| || |||| Sbjct 1179415 AGCACAAAACAGGATCTTCC 1179434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235670182307700