Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1361 140 2e-28 seq1830 136 2e-27 seq1421 122 5e-23 seq1576 113 3e-20 seq268 107 1e-18 seq302 93.3 3e-14 seq3321 86.0 4e-12 seq688 82.4 5e-11 >seq1361 Length=2134540 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| || | |||| |||||||||||| || |||||| |||||||| || |||| | Sbjct 1710884 CCGCCCCTCAATCGCAGCACCAAATGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGCA 1710825 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | | || ||||| |||||||| ||||| || |||||||||||||| || || Sbjct 1710824 AGTGTCCTCCCATCCTCAAGCTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGAGGA 1710765 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| |||| || || | ||| || ||| ||||| || Sbjct 1710764 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTCACATTGTCAATGGTATCTGAACTCTCAAC 1710706 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || |||| ||||| ||||| ||||||||| Sbjct 1710705 CTCCAGTGTGATGGTCTTCCCAGTTAGTGTTTTGACAAAGATCTGCATG 1710657 Score = 105 bits (116), Expect = 4e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | |||||| ||| ||| ||||| ||||| || |||| ||| || || Sbjct 1710191 AGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAGTCTGCAAGAGTACGG 1710132 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || |||||||| | | ||||||||| || || | ||| || Sbjct 1710131 CCATCTTCAAGCTGCTTTCCAGCAAATATAAGCCTCTGTTGGTCAGGAGGAATTCCTTCT 1710072 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 || ||| ||||| |||| ||| || ||| |||||| || || | || Sbjct 1710071 TTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTCAAGTGTG 1710012 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || |||| ||||||||||| |||||||| Sbjct 1710011 ATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCAT 1709974 Score = 95.1 bits (104), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||| ||| ||| ||||| ||||| || |||| ||| || || | |||||||| || Sbjct 1710405 ATGGAGGGTGGACTCTTTTTGGATGTTGTAGTCTGCAAGAGTACGGCCATCTTCAAGCTG 1710346 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || |||||||| || | | |||||| || || || | || ||||| ||| ||||| Sbjct 1710345 CTTTCCGGCAAAAATCAGCCTCTGTTGATCTGGGGGAATCCCTTCCTTATCTTGAATCTT 1710286 Query 34623 TTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || || | ||| || || |||||| ||||| | || || || || || | Sbjct 1710285 A-GCCTTCACATTGTCAATGGTATCCGAGCTCTCAACTTCAAGAGTGATGGTCTTGCCAG 1710227 Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707 | | ||||||||||| ||||||||| Sbjct 1710226 TAAGAGTTTTCACAAAGATCTGCATG 1710201 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || || || || |||| ||| || || | || ||||| || Sbjct 1709720 TGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGAGTGCGTCCATCATCAAGCTGC 1709661 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | | |||||| || || || | ||| ||||| ||| ||||| Sbjct 1709660 TTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTA 1709601 Query 34624 TGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683 |||| ||| || ||| |||||| || || | ||| || || || || ||| Sbjct 1709600 GCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCAGTT 1709541 Query 34684 AACGTTTTCACAAAAATCTGCAT 34706 | ||||||||||| |||||||| Sbjct 1709540 AGAGTTTTCACAAAGATCTGCAT 1709518 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || || || || |||| ||| || || | || ||||| || Sbjct 1709948 TGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGAGTGCGTCCATCATCAAGCTGC 1709889 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | | |||||| || || || | ||| ||||| ||| ||||| Sbjct 1709888 TTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTA 1709829 Query 34624 TGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683 |||| ||| || ||| |||||| || || | || || || || || ||| Sbjct 1709828 GCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTT 1709769 Query 34684 AACGTTTTCACAAAAATCTGCAT 34706 | ||||||||||| |||||||| Sbjct 1709768 AGAGTTTTCACAAAGATCTGCAT 1709746 >seq1830 Length=882674 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || |||| |||||||||||| || |||||||| |||||| || |||| Sbjct 346651 GCCTCCCCTCAGTCGCAGCACCAAATGGAGTGTTGACTCCTTTTAAATGTTGTAGTCTGC 346710 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| | | | || || || || || || ||||| || | ||||| || || || || Sbjct 346711 AAGTGTCCTCCCATCCTCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGGGGG 346770 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| ||| |||| ||||||| | |||||| ||| |||||||| Sbjct 346771 AATGCCTTCCTTGTC-CTGAATCTTTGCTTTAACGTTGTCAATTGTATCTGAGCTCTCCA 346829 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || || |||| || || ||||| |||||||| Sbjct 346830 CTTCCAATGTGATGGTCTTCCCTATTAAGGTCTTGACAAAGATCTGCAT 346878 Score = 109 bits (120), Expect = 3e-19 Identities = 167/232 (72%), Gaps = 11/232 (5%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCT--CTCCTTTTGAATGTTATAATCTG 34537 || || || ||||||| |||||||||||| || | || |||||||||||| || |||| Sbjct 346427 CCTCCCCTCAGACGCAGCACCAAATGGAGTGTCATGACTTCTTTTGAATGTTGTAGTCTG 346486 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||||| | | | || | || || || || ||||| || | ||||| || || || | Sbjct 346487 CAAGTGTCCTCCCATCCGCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGG-G 346545 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGC-TCTC 34655 | | | ||||| || ||| |||| |||||| | |||||| ||| || |||| Sbjct 346546 GGAATGCCTCCCTG-----AATC-TTTGCTTTAACATTGTCAATTGTATCTGAGCTTCTC 346599 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||||| || || || || || ||||| || || || || ||||||||| Sbjct 346600 CACTTCCAATGTGATGGTCTTCCCTGTTAAGGTCTTGACGAAGATCTGCATG 346651 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/235 (69%), Gaps = 18/235 (8%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || || ||| |||||| || ||| |||| |||| ||| || ||| Sbjct 346192 AGACGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGATATAGTCTGCAAGGGTGCGC 346251 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATT-----------AAA-----CGCTGTTGGTC 34592 | || |||||||| | ||| ||||| | ||| ||||| ||||| Sbjct 346252 CCATCCTCAAGTTGCTCACCAGCAAAGTTGCTCACCAGCAAAAATCAGTCGCTGCTGGTC 346311 Query 34593 CGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGC 34651 || || | || |||||||| ||| | |||| |||||| | |||||| ||| || Sbjct 346312 TGGAGGAATACCTTCCTTGTCC-TGAACCTTTGCTTTAACATTGTCAATTGTATCTAAGC 346370 Query 34652 TCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||||||| || || || || || || || || || ||||| ||| |||| Sbjct 346371 TCTCCACTTCCAATGTGATTGTCTTCCCTGTCAAGGTCTTGACAAAGATCGGCAT 346425 >seq1421 Length=9127415 Score = 122 bits (134), Expect = 5e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || |||||| || || || || || | || || || |||| ||| Sbjct 1343424 ACCAAATGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCGTCCTCA 1343483 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | | ||||||||| || || | |||||||||||| | Sbjct 1343484 AGCTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 1343543 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| || ||||||||| |||||| || |||| ||| || || || Sbjct 1343544 ATC-TTAGCCTTCACGTTATCAATTGTGTCGGAGCTCTCAACCTCCAAGGTAATAGTCTT 1343602 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||||| |||||||| || ||||||||| Sbjct 1343603 GCCGGTTAGGGTTTTCACGAAGATCTGCATG 1343633 Score = 114 bits (126), Expect = 8e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || ||| |||||| || || || || || | || || || |||| ||| Sbjct 1343196 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCGTCCTCA 1343255 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | | ||| |||||||| || | |||||||||||| | Sbjct 1343256 AGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 1343315 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| || ||||||||| ||| || || |||| ||| || || || Sbjct 1343316 ATC-TTAGCCTTCACGTTATCAATTGTGTCAGAGCTTTCAACCTCCAAGGTAATAGTCTT 1343374 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| |||||||| || |||||||| Sbjct 1343375 GCCGGTTAGGGTTTTCACGAAGATCTGCAT 1343404 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||| ||||| |||||| || |||||||| || | || || | Sbjct 1342503 AGACGGAGGACAAGATGCAGAGTAGACTCCTTCTGGATGTTATAGTCGGCCAGAGTCCTT 1342562 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || ||||| |||||||| || || | ||| || ||||| || | |||||| Sbjct 1342563 CCATCTTCCAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCC 1342622 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | || ||| | ||||||||| ||| ||||| |||| ||| Sbjct 1342623 TTGTCT-TGAATTTTAGCCTTCACGTTGTCAATTGTGTCGGAGCTTTCCACCTCCAGGGT 1342681 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || ||||| || |||||||| Sbjct 1342682 AATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1342720 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| |||||| || || || ||||| | || || || |||| || Sbjct 1343652 ACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCG 1343711 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || ||||| || || | | ||| ||||||||||| | |||||||| ||| || Sbjct 1343712 AGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTATCT-TG 1343770 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || | || ||| | || ||||| ||||| || || | || || || || Sbjct 1343771 AATCTTGGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTAATAGTCTT 1343830 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||| ||||||||||| |||||||| Sbjct 1343831 ACCGGTTAGGGTTTTCACAAAGATCTGCAT 1343860 >seq1576 Length=5940209 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || | ||| | ||||| ||||| ||| ||||| || ||||| ||||| | Sbjct 2986235 GCCACCCCTCAAACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGC 2986294 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || ||||| | || || || ||||| ||||| || || | | ||| ||||| || || Sbjct 2986295 GAGGGTTCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGTGG 2986354 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | ||| ||||| |||||| | Sbjct 2986355 GATACCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 2986413 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| || || ||||| || | |||||||| || |||||||| Sbjct 2986414 CTTCCAGGGTGATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 2986462 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 2986464 CCACCCCTGAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCC 2986523 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || ||||| || || | | || ||||| || || Sbjct 2986524 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGTGGA 2986583 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || ||| | || ||||| ||||| || Sbjct 2986584 ATTCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGAC 2986642 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||||| || || ||||||| |||||||| || |||||||| Sbjct 2986643 CTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 2986690 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | ||||| |||||| || |||||| || || || ||||| | Sbjct 2986692 CCACCCCTGAGACGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCG 2986751 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || ||||| || || | | || ||||| || || Sbjct 2986752 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGA 2986811 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | ||| |||||||| |||||| | |||||| || || ||||| ||||| || Sbjct 2986812 ATTCCTTCCTTGTCCTGGATCTTA-GCCTTAACGTTATCGATGGTGTCGGAACTCTCGAC 2986870 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||||| ||||||||||| |||||||| Sbjct 2986871 CTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 2986918 >seq268 Length=6919517 Score = 107 bits (118), Expect = 1e-18 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || ||||| |||||| |||||||| ||||| | || |||| Sbjct 3332733 AGACGGAGCACGAGGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCCGCTAGGGTTCTG 3332792 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || ||||| ||||| || || | |||||| ||||| ||||| | ||| ||| Sbjct 3332793 CCGTCGTCGAGCTGTTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGAATTCCTTCC 3332852 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||||| | || ||| | || || || |||||| || || | || Sbjct 3332853 TTATCCTGAATCTTC-GCCTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCGAGAGT 3332911 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG-TTGA 34711 ||||| |||||||| | ||||||||||| || |||||| |||| Sbjct 3332912 GATCGTCTTACCGGTAAGGGTTTTCACAAAGATTTGCATGCTTGA 3332956 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||||| || ||||| || || || ||||| | Sbjct 3332268 CCTCCGCGAAGACGGAGAACGAGGTGGAGTGTTGATTCCTTCTGTATATTGTAATCAGCT 3332327 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || ||||| ||||| || || || ||||| || |||||||| Sbjct 3332328 AGGGTTCGTCCGTCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGATCCGGCGGA 3332387 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| || | || || | || || || |||||| || Sbjct 3332388 ATACCCTCCTTGTCT-TGAATCTTAGCCTTGACATTGTCGATCGTATCGGAGCTCTCGAC 3332446 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || ||||| ||||| || || |||||||| || |||||||| Sbjct 3332447 CTCGAGAGTAATCGTCTTACCAGTCAAGGTTTTCACGAAGATCTGCAT 3332494 >seq302 Length=4569211 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || || | ||||| |||||||| ||| || || ||||| || || | Sbjct 222401 CGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCCG 222460 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || ||| |||| || || || || ||||| || || | ||||| ||||| || | Sbjct 222461 CCAAGGTCCGCCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCAGGTG 222520 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||||| ||| ||| | || || | || ||||| | ||| Sbjct 222521 GGATTCCCTCCTTGTCT-TGAATTTTCGCCTTCACATTGTCGATGGTGTCGGAGGATTCC 222579 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || |||| |||||| || || || || | |||||||| || |||||||| || Sbjct 222580 ACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTT 222632 >seq3321 Length=7168875 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||| ||||| || |||| ||| || ||| |||| || || | || ||||| || Sbjct 34873 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGCCCGTCCTCGAGCTACTTTCCGGCGAAG 34814 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | || || ||||| || || | ||||||||||| ||| ||| | || || | Sbjct 34813 ATGAGGCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGAT-TTTCGCCTTCACATT 34755 Query 34636 -AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 ||| ||||| || | ||| || || | ||||||||| || || || | || ||| Sbjct 34754 GTCAATGGTGTC--CGATGACTCGACCTCTAGGGTTATCGTCTTCCCCGTCAGGGTCTTC 34697 Query 34693 ACAAAAATCTGCATGTT 34709 ||||| |||||||| || Sbjct 34696 ACAAAGATCTGCATTTT 34680 >seq688 Length=8729492 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || || | || || || |||| || || || Sbjct 4649655 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 4649596 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||||||||| | || |||||||| |||| || Sbjct 4649595 TTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATC-TT 4649537 Query 34624 TGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 || || || | || |||| | || | || || || | ||| ||||| || || | Sbjct 4649536 TGCCTTCACATTGTCGATGGTGTCCGACGAT-TCAACCTCGAGGGTGATCGTCTTCCCCG 4649478 Query 34682 TTAACGTTTTCACAAAAATCTGCATGTT 34709 | | || |||||||| |||||||| || Sbjct 4649477 TCAGAGTCTTCACAAAGATCTGCATTTT 4649450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314716489348394