Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq3418 670 0.0 seq2762 477 1e-129 seq3417 266 4e-66 seq684 260 2e-64 seq2647 230 3e-55 seq2653 214 2e-50 seq1564 206 3e-48 >seq3418 Length=161897 Score = 670 bits (742), Expect = 0.0 Identities = 745/989 (75%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 183196 TTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTG 183255 ||||| | ||||| ||||||||| | ||||| || || | || |||||||| || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 183256 ATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCC 183314 ||||| || ||| | ||| | ||||| |||| || || | |||||| | |||||||| Sbjct 1499 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTCC 1441 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||| || || || || || || || ||||| ||| |||| || || | || |||||||| Sbjct 1440 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAA 1381 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 1380 TATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAAT 1321 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494 |||||||| ||||| | ||||| ||| | || ||||| |||||||| |||| | || Sbjct 1320 TTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 1261 Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554 | |||||| | |||| || || ||||||||||||||||||||| | || ||| Sbjct 1260 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1201 Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614 ||| |||||||| |||||||| |||||| || || |||||||| ||||| ||||| Sbjct 1200 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGC 1141 Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTAT 183674 || ||| || |||| || ||||||| || |||| |||||||||||| || || || Sbjct 1140 AGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 1081 Query 183675 CAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 183734 | ||| || || || | ||| |||| ||||| || ||||||||||| || |||||||| Sbjct 1080 CTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 1021 Query 183735 CTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGG 183794 || || ||| | || || |||||||| ||||| || || || |||||||| ||||| || Sbjct 1020 ATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 961 Query 183795 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATG 183853 ||| |||| ||||| | | | | || | |||||||| || ||| || ||| | | Sbjct 960 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 902 Query 183854 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTG 183913 |||||| ||||||||||| ||||| || || || || || ||||||||||| || |||| Sbjct 901 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 842 Query 183914 GTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTG 183973 | || |||||||||| |||||| || ||||| |||||||| | ||||||||| | | Sbjct 841 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 782 Query 183974 CTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTA 184033 |||||||||| || || || |||||||| |||||| | ||| | |||||||||||||| | Sbjct 781 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCA 722 Query 184034 ACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACA 184093 |||| || ||||| || |||||||| ||| | ||||| ||||||| ||||| | || | Sbjct 721 ACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATA 662 Query 184094 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATG 184153 | ||||| || | | ||||||||| ||||| |||||||| ||||| || ||||||| Sbjct 661 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 602 Query 184154 CTCACAACTTCCCTCTCGACCTTGCTGCT 184182 |||| ||||||||||| ||||| |||||| Sbjct 601 CTCATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 491 bits (544), Expect = 6e-134 Identities = 713/1004 (71%), Gaps = 2/1004 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| || || ||||| |||||||| || || | || | Sbjct 34471 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCT 34530 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || || ||| | || || ||||| ||||| || | Sbjct 34531 TTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCAT 34590 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 |||||||||| || ||||| ||| || | || ||| ||||| | || || |||| Sbjct 34591 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAG 34650 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 | || ||||||||| | | | | |||||| | | |||| ||||||||||| | | Sbjct 34651 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 34710 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 |||||||| | | || |||| ||| | ||||| || |||| |||||| || ||||||| Sbjct 34711 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 34770 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329 | || || | || |||||||||||| | || || || || | ||| ||| | | Sbjct 34771 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 34830 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || |||||||| || || |||||||| || ||||| |||||| ||||||| Sbjct 34831 -TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34889 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 | || || || || || ||||| |||||||| || || ||||| || ||||| Sbjct 34890 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 34949 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || ||| ||||| | | || | ||||| || || || ||||| ||||| ||||| || Sbjct 34950 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 35009 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || ||| | | || | ||| |||| | || || ||||||| ||| Sbjct 35010 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 35069 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 |||||||||||| | | |||||| || || ||||| |||||| || || | | Sbjct 35070 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 35129 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || ||| |||||||| ||||| ||||| ||||| ||| | || ||||| || ||||| Sbjct 35130 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 35189 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 35190 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 35249 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 ||| | |||| | | |||| | | ||||| || || ||||| ||||| |||||| Sbjct 35250 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 35309 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 || || ||| || | | ||||| || |||||||| || || || ||||| ||||| Sbjct 35310 TTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAA 35369 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 ||||| || || || |||||| | ||||| |||||||| | ||||| || |||||| Sbjct 35370 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAA 35429 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||| || |||| ||||| || || | ||| | || |||||||| Sbjct 35430 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 35473 >seq2762 Length=458829 Score = 477 bits (528), Expect = 1e-129 Identities = 713/1006 (71%), Gaps = 7/1006 (1%) Strand=Plus/Minus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| || || ||||| |||||||| || || | || | Sbjct 61305 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCT 61246 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || || ||| | || || ||||| ||||| || | Sbjct 61245 TTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCAT 61186 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 |||||||||| || ||||| ||| || | || ||| ||||| | || || |||| Sbjct 61185 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAG 61126 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 | || ||||||||| | | | | |||||| | | |||| ||||||||||| | | Sbjct 61125 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 61066 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 |||||||| | | || |||| ||| | ||||| || |||| |||||| || ||||||| Sbjct 61065 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 61006 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329 | || || | || |||||||||||| | || || || || | ||| ||| | | Sbjct 61005 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 60946 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || | || |||||||| || || |||||||| || ||||| |||||| ||||||| Sbjct 60945 -TGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 60887 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 | || || || || || ||||| |||||||| || || ||||| || ||||| Sbjct 60886 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 60827 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || ||| ||||| | | || | ||||| || || || ||||| ||||| |||| || Sbjct 60826 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCAT 60767 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || ||| | | || | ||| |||| | || || ||||||| ||| Sbjct 60766 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 60707 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 |||||||||||| | | |||||| || || ||||| |||||| || || | | Sbjct 60706 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 60647 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || ||| |||||||| ||||| ||||| ||||| ||| | || ||||| || ||||| Sbjct 60646 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 60587 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 60586 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 60527 Query 186750 GGTCTTTGGA--CCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATG 186807 ||| | |||| | ||| |||| | | ||||| || || ||||| ||||| |||| Sbjct 60526 GGTTTATGGATGAGTGTTC--TTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATG 60469 Query 186808 ACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCA 186867 |||| || ||| || | | ||||| || |||||||| || || || ||||| |||| Sbjct 60468 ACTTCGTTTCTCAAGAAAT-CGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCA 60410 Query 186868 AGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATG 186927 | ||||| || || || |||||| | ||||| |||||||| | ||||| || |||| Sbjct 60409 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATG 60350 Query 186928 AAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||||| || |||| ||||| || || | ||| | || |||||||| Sbjct 60349 AAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq3417 Length=265768 Score = 266 bits (294), Expect = 4e-66 Identities = 251/320 (78%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922 |||||||||| ||| | || || || || || ||||||||| || ||||| || ||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982 ||||||| |||||| || ||||| |||||||| | ||||||||| | |||||||||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042 | || || || |||||||| |||||| | ||| | |||||||||||||| ||||| |||| Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAG 184102 ||| || |||||||| ||| | ||||| | ||||| || || | || || ||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 184103 ACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACT 184162 | | | ||||||||| ||||| |||||||| ||||| || ||||||||||| |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 184163 TCCCTCTCGACCTTGCTGCT 184182 ||||||| ||||| |||||| Sbjct 155910 TCCCTCTAGACCTAGCTGCT 155891 >seq684 Length=2855409 Score = 260 bits (288), Expect = 2e-64 Identities = 375/526 (71%), Gaps = 2/526 (0%) Strand=Plus/Plus Query 186090 TGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCA 186149 ||||||||||| || ||||| ||| || | || ||| ||||| | || || ||| Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCA 2853955 Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209 || || ||||||||| | | | | |||||| | | |||| ||||||||||| | Sbjct 2853956 GTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 2854015 Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269 ||||||||| | | || |||| ||| | ||||| || |||| |||||| || |||||| Sbjct 2854016 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCAC 2854075 Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGG 186328 || || || | || |||||||||||| | || || || || | ||| ||| | Sbjct 2854076 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAA 2854135 Query 186329 TATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATT 186388 | | || || || |||||||| || || |||||||| || ||||| |||||| |||||| Sbjct 2854136 T-TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 2854194 Query 186389 CCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGC 186448 | | || || || || || ||||| |||||||| || || ||||| || ||||| Sbjct 2854195 CTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 2854254 Query 186449 AATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCA 186508 || ||| ||||| | | || | ||||| || || || ||||| ||||| ||||| || Sbjct 2854255 TATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 2854314 Query 186509 CATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTAC 186568 |||||||| || || ||| | | || | ||| |||| | || || ||||||| ||| Sbjct 2854315 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTAC 2854374 Query 186569 TGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTC 186614 |||||||||||| | | |||||| || || ||||| |||||| Sbjct 2854375 CGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq2647 Length=4788780 Score = 230 bits (254), Expect = 3e-55 Identities = 295/403 (73%), Gaps = 3/403 (1%) Strand=Plus/Minus Query 183626 TCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCT 183685 |||| || |||| || || |||| |||||||||||| || || ||| | | || | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 183686 TTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGC 183745 | || | ||| |||| ||||| | ||||||||||| || |||||||| ||||| ||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 183746 TGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTA 183805 | || || ||| |||| ||||| || || || ||||||| ||||| ||||| || | || Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTC-CTTGGTA 734293 Query 183806 CTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTC 183864 || || | | | || | ||||||| | ||| || ||| | |||||||| ||| Sbjct 734292 ATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTC 734233 Query 183865 GGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATC 183924 |||||||| ||||| | || || || || | || |||||| || ||||| || ||||| Sbjct 734232 GGTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATC 734174 Query 183925 TTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCA 183984 ||| | |||||| || ||||| |||||||| | ||||||||| | |||||||||| Sbjct 734173 TTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTT 734114 Query 183985 GTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGG 184027 || | || |||||||| |||||| | ||| | ||||||| || Sbjct 734113 GTAGCAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTAGGG 734071 Score = 132 bits (146), Expect = 6e-26 Identities = 127/163 (78%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 184018 AGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAA 184077 || ||||||||||| ||||| || ||||| || |||||||| || | |||||| ||||| Sbjct 733759 AGTACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAA 733700 Query 184078 GGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTG 184137 || ||||| | || || ||||| || | | |||| |||| ||||| |||||||| Sbjct 733699 GGCCGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTT 733640 Query 184138 ATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 184180 ||||| || ||||||||| ||||||||||| ||||| |||| Sbjct 733639 ATGCATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq2653 Length=4899193 Score = 214 bits (236), Expect = 2e-50 Identities = 285/393 (73%), Gaps = 11/393 (3%) Strand=Plus/Plus Query 183569 CTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCCTGGTCT 183628 ||||||| |||||| || || |||||||| ||||| ||||| || ||| || ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 183629 ATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTA 183688 | || ||||||| || |||| |||||||||||| || || ||| ||| || || | Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 183689 ACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGA--------TGCACCCCTTCCA 183740 | | ||| |||| ||||| || |||||||||| || | ||||||| || || Sbjct 3225552 ATTC-ATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 183741 CATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCT 183800 ||| | || || |||||||| ||||| || || || |||||||| ||||| ||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 183801 GGTTACTTCCTCGCTGGTTCGTG-AAACCACTGAGTCTGAGTCACAGAACTATGGTTACA 183859 ||| ||||| | | | | || | ||||||| || ||| | ||| | ||||||| Sbjct 3225671 GGTAACTTC-TAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACA 3225729 Query 183860 AGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTC 183919 ||||||||||| ||||| || || || || || ||||||||||| || ||||| || Sbjct 3225730 GATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGAT 3225789 Query 183920 TGATCTTCCAGTATGCTTCGTTTAACAATTCTC 183952 ||||||| || |||||| || ||||| |||| Sbjct 3225790 TGATCTTTCAATATGCTAGTTTCAACAACTCTC 3225822 >seq1564 Length=1404973 Score = 206 bits (228), Expect = 3e-48 Identities = 276/381 (72%), Gaps = 2/381 (1%) Strand=Plus/Minus Query 183238 GGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGT 183296 || |||||||| ||||||| || ||| | ||| | ||||| |||| || || | Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 183297 TGCCTTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTC 183356 |||||| | ||||||||||| || || || || || || || ||||| ||| |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 183357 GCTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGG 183416 || | || || ||||| || ||||||||||| || |||| |||| || || | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 183417 ACTTCACTTCTATCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGG 183476 | ||||| || || || |||||||| ||||| | ||||| ||| | || ||||| || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 183477 TCCTTACCAACTCGTAGTCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGA 183536 |||||| |||| | || | |||||| | |||| || || |||||||||||||| Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 140881 Query 183537 GTGGGAATTGTCTTACCGTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACC 183596 ||||||| | || |||||| |||||||| |||||||| |||||| || || || Sbjct 140880 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCC 140821 Query 183597 TGTTGCTGCTGCAACCGCTGT 183617 |||||| ||||| ||||| || Sbjct 140820 TGTTGCAGCTGCTACCGCAGT 140800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622043822042160