Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq3418 715 0.0 seq2762 558 4e-154 seq684 318 7e-82 seq2653 257 2e-63 seq2647 257 2e-63 seq3417 244 1e-59 seq1564 228 9e-55 seq1029 84.2 2e-11 >seq3418 Length=161897 Score = 715 bits (792), Expect = 0.0 Identities = 755/989 (76%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 |||||||||||| |||| || || || ||| | || | || ||||| || || || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || || |||||||| | ||||| Sbjct 1499 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATAGCCTTCATTGCTGCTC 1442 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || ||||| || |||| || || | || ||||||| Sbjct 1441 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACA 1382 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || |||||||||||| |||| || ||||| ||||| ||| | ||||| ||||| | Sbjct 1381 ATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAA 1322 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| ||| | || |||||| | |||||||| ||||||| |||| ||| Sbjct 1321 TTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 1262 Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285 | | |||||| | |||| | | ||||||||||||||||||||||||| || || Sbjct 1261 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1202 Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345 |||| |||||||| ||||||||| || |||||||| |||||||| || || || | | Sbjct 1201 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCG 1142 Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405 |||| ||| || |||| || ||||||| || ||| ||||||| |||||||| || | Sbjct 1141 CAGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1082 Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465 ||||||| || ||||| | |||| | || |||||||||||||||||||| || ||||||| Sbjct 1081 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 1022 Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525 | || |||||| | |||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 1021 CATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 962 Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585 |||| |||| |||||| || | | || ||||| |||||||| || ||| | | Sbjct 961 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 902 Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645 |||||| || ||||| || |||||||| || || ||||| || ||||| ||||| |||| Sbjct 901 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 842 Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705 | || |||| |||||||| ||| ||||||||||| |||||| | ||||||||| | | Sbjct 841 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 782 Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765 | || |||||||| || ||||||||||| |||||| | || | ||||| |||||||||| Sbjct 781 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCA 722 Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825 |||| ||||||||||| |||||||| ||| | | ||| |||| || ||||| | || | Sbjct 721 ACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATA 662 Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885 | ||||| || | | ||||||||| || || |||||||| ||||| || ||||||| Sbjct 661 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 602 Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCT 164914 |||| ||||||||||| ||||| |||||| Sbjct 601 CTCATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 580 bits (642), Expect = 1e-160 Identities = 728/993 (73%), Gaps = 6/993 (1%) Strand=Plus/Plus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||||||||||||||| |||||||| || || | || ||||| ||| ||| | Sbjct 34488 AGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTC 34547 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | || |||||| | || || || || || || || |||||||| || ||| | Sbjct 34548 GCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTG 34607 Query 165300 GCGAGTTCCTATCTTG-AGGGTGCAAACTTTCTT-ACTGCGGCAGTTTCTACTCCAGCAG 165357 || ||||||||| | | ||| ||||| |||||| ||||| |||||||| ||||| || Sbjct 34608 GCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAGTTTCGACTCCTGCTA 34665 Query 165358 ACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCC 165417 | | | | |||||| | || | |||||||||||||| | ||||| || || | | Sbjct 34666 ATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTC 34725 Query 165418 GCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTA 165477 | ||||| ||| | ||||| || ||||||||||| || |||||||| || || | ||| | Sbjct 34726 GTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGCGCTTTCGGACTAA 34785 Query 165478 TAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAAT 165536 ||||||||||| | || || || || || || ||| || || | | || ||||| ||| Sbjct 34786 TAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCCTTATAAT 34844 Query 165537 GCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTG 165596 || || || ||||||||||| |||||||| || ||| ||| || | || ||||| || Sbjct 34845 GCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTA 34904 Query 165597 GGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTG 165656 || || || |||||||| || || || || || ||||| || || |||||| | Sbjct 34905 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 34964 Query 165657 CTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCA 165716 ||||| | |||||||| ||||| ||||| |||| || ||||| |||||||| || || Sbjct 34965 CTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCC 35024 Query 165717 GGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTG 165776 ||| | || |||| || ||||| | || |||||||||| ||| ||||| |||||||| Sbjct 35025 GGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTA 35084 Query 165777 TATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAA 165836 | |||||| ||||| ||||| || ||| || ||| | ||||| || ||| Sbjct 35085 TTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAA 35144 Query 165837 ACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGC 165896 |||||||| ||||| ||||||||||| || ||||| || || ||||| ||||||| | Sbjct 35145 ACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 35204 Query 165897 AATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGT 165956 ||||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| Sbjct 35205 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 35264 Query 165957 TCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAG 166016 || |||| | | ||||| || || || || ||||| ||||| || || ||||| || Sbjct 35265 GCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAA 35324 Query 166017 ATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAAT 166076 ||| | || || || ||||| || |||||||| ||||| || ||||| || ||| | || Sbjct 35325 ATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 35384 Query 166077 GAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCT 166136 ||||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||||| Sbjct 35385 GAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 35444 Query 166137 GAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || || | ||| | || ||||| |||||| Sbjct 35445 GAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 35477 >seq2762 Length=458829 Score = 558 bits (618), Expect = 4e-154 Identities = 724/993 (73%), Gaps = 7/993 (1%) Strand=Plus/Minus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||||||||||||||| |||||||| || || | || ||||| ||| ||| | Sbjct 61288 AGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTC 61229 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | || |||||| | || || || || || || || |||||||| || ||| | Sbjct 61228 GCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTG 61169 Query 165300 GCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAG 165357 || ||||||||| | || ||| |||| ||||||| |||| |||||||| ||||| || Sbjct 61168 GCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAGTTTCGACTCCTGCTA 61111 Query 165358 ACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCC 165417 | | | | |||||| | || | |||||||||||||| | ||||| || || | | Sbjct 61110 ATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTC 61051 Query 165418 GCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTA 165477 | ||||| ||| | ||||| || ||||||||||| || |||||||| || || | ||| | Sbjct 61050 GTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGCGCTTTCGGACTAA 60991 Query 165478 TAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAAT 165536 ||||||||||| | || || || || || || ||| || || | | || | ||| ||| Sbjct 60990 TAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCTTTATAAT 60932 Query 165537 GCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTG 165596 || || || ||||||||||| |||||||| || ||| ||| || | || ||||| || Sbjct 60931 GCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTA 60872 Query 165597 GGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTG 165656 || || || |||||||| || || || || || ||||| || || |||||| | Sbjct 60871 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 60812 Query 165657 CTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCA 165716 ||||| | |||||||| ||||| ||||| |||| | ||||| |||||||| || || Sbjct 60811 CTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCATATGATGGGAGTTGCC 60752 Query 165717 GGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTG 165776 ||| | || |||| || ||||| | || |||||||||| ||| ||||| |||||||| Sbjct 60751 GGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTA 60692 Query 165777 TATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAA 165836 | |||||| ||||| ||||| || ||| || ||| | ||||| || ||| Sbjct 60691 TTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAA 60632 Query 165837 ACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGC 165896 |||||||| ||||| ||||||||||| || ||||| || || ||||| ||||||| | Sbjct 60631 ACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 60572 Query 165897 AATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGT 165956 ||||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| Sbjct 60571 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 60512 Query 165957 TCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAG 166016 | |||| | | ||||| || || || || ||||| ||||| || || ||||| || Sbjct 60511 GTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGA- 60453 Query 166017 ATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAAT 166076 | | | || || || ||||| || |||||||| ||||| || ||||| || ||| | || Sbjct 60452 AATCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 60393 Query 166077 GAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCT 166136 ||||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||||| Sbjct 60392 GAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 60333 Query 166137 GAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || || | ||| | || ||||| |||||| Sbjct 60332 GAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 60300 >seq684 Length=2855409 Score = 318 bits (352), Expect = 7e-82 Identities = 391/528 (74%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 165282 TGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGG 165339 |||||||| || ||| | || ||||||||| | || ||| |||| ||||||| |||| | Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCG 2853953 Query 165340 CAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGT 165399 ||||||| ||||| || | | | | |||||| | || | |||||||||||||| Sbjct 2853954 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 2854013 Query 165400 CTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCC 165459 | ||||| || || | || ||||| ||| | ||||| || ||||||||||| || |||| Sbjct 2854014 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 2854073 Query 165460 ACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATC 165518 |||| || || | ||| |||||||||||| | || || || || || || ||| || || Sbjct 2854074 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTC 2854133 Query 165519 GGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTT 165578 | | || ||||| ||||| || || ||||||||||| |||||||| || ||| ||| Sbjct 2854134 AAT-TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTA 2854192 Query 165579 TTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCA 165638 || | || ||||| || || || || |||||||| || || || || || ||| Sbjct 2854193 TTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCA 2854252 Query 165639 GCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTT 165698 || || || |||||| | ||||| | |||||||| ||||| ||||| |||| || ||| Sbjct 2854253 GCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTT 2854312 Query 165699 CACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTT 165758 || |||||||| || || ||| | || |||| || ||||| | || |||||||||| | Sbjct 2854313 CATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCT 2854372 Query 165759 ACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTC 165806 || ||||| |||||||| | |||||| ||||| ||||| || ||| Sbjct 2854373 ACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq2653 Length=4899193 Score = 257 bits (284), Expect = 2e-63 Identities = 291/390 (75%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 164301 CTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCT 164360 |||||||| || |||||||| |||||||| || || || | ||||| ||| || ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 164361 ATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCTTCA 164420 | || ||||||| || ||| ||||||| |||||||| || |||||||| || |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 164421 ACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCA--------TGCACCCCTTCCA 164472 | | |||| | || ||||||||| |||||||||| || | ||||||| || || Sbjct 3225552 ATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 164473 TATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCT 164532 |||| | |||||||| ||||| || ||||| || || |||||||| ||||| ||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 164533 GGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAA 164592 ||| |||||| || | || ||||| |||||||| | ||| | ||||||| Sbjct 3225671 GGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAG 3225730 Query 164593 GTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCT 164652 || ||||| || |||||||| || || ||||| || ||||| ||||| ||||| || | Sbjct 3225731 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 3225790 Query 164653 GATTTTCCAATACGCTTCCTTCAACAACTC 164682 ||| || ||||| ||| ||||||||||| Sbjct 3225791 GATCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq2647 Length=4788780 Score = 257 bits (284), Expect = 2e-63 Identities = 296/397 (75%), Gaps = 1/397 (0%) Strand=Plus/Minus Query 164358 TCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCT 164417 |||| || |||| || || ||| ||||||| |||||||| || |||||| | || | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 164418 TCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCCCTTCCATATGC 164477 |||| | |||| | || ||||||| |||||||||||| || |||||||| ||||||||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 164478 TCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTA 164537 | |||||||| |||| || ||||| || || ||||||| ||||| ||||| |||| | Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAA 734292 Query 164538 CTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTG 164597 |||| || | | || |||| ||||||| || ||| | |||||||| || | Sbjct 734291 TTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTCG 734232 Query 164598 GTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTT 164657 |||| || |||| | | || || ||||| | | ||| ||||| ||||| || |||| | Sbjct 734231 GTCAAGAGGAAG-ACCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATCT 734173 Query 164658 TCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTG 164717 || |||| ||| ||||||||||| |||||| | ||||||||| | || || |||| || Sbjct 734172 TCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTTG 734113 Query 164718 TTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCAC 164754 | | ||||||||||| |||||| | || | ||||| Sbjct 734112 TAGCAGGTATCTGGTTCACTGCTTTAGGTATCAGCAC 734076 Score = 127 bits (140), Expect = 2e-24 Identities = 126/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 164750 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG 164809 || || |||||||||||||| ||||||||||| |||||||| || | || ||| |||| Sbjct 733759 AGTACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAA 733700 Query 164810 GGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTG 164869 || ||||| | || || ||||| || | | |||| |||| || || |||||||| Sbjct 733699 GGCCGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTT 733640 Query 164870 ATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 164912 ||||| || ||||||||| ||||||||||| ||||| |||| Sbjct 733639 ATGCATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq3417 Length=265768 Score = 244 bits (270), Expect = 1e-59 Identities = 245/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 164597 GGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATT 164656 ||||| || ||| |||| || || ||||| || ||||| ||| ||||| || |||| Sbjct 156208 GGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGATC 156149 Query 164657 TTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCT 164716 |||||||| ||| ||||||||||| |||||| | ||||||||| | || || |||||| Sbjct 156148 TTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCT 156089 Query 164717 GTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGT 164776 || || ||||||||||| |||||| | || | ||||| |||||||||||||| || ||| Sbjct 156088 GTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATGGT 156029 Query 164777 TTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGAC 164836 | || |||||||| ||| | | ||| | || || || || | || || ||||| || Sbjct 156028 TGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTGAT 155969 Query 164837 GTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTC 164896 | | ||||||||| || || |||||||| ||||| || ||||||||||| |||||| Sbjct 155968 ATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 155909 Query 164897 CCTCTCGACCTTGCTGCT 164914 ||||| ||||| |||||| Sbjct 155908 CCTCTAGACCTAGCTGCT 155891 >seq1564 Length=1404973 Score = 228 bits (252), Expect = 9e-55 Identities = 283/382 (74%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 163970 GGTTGGTTCGGCGTCCTGATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCA 164027 || ||||| || || ||||||| |||| | | | | | || ||| | ||| || || | Sbjct 141179 GGATGGTTTGGTGTTTTGATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTA 141122 Query 164028 TCGCCTTCATCGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTT 164087 | |||||||| | ||||||||| || || || ||||| || || ||||| || |||| | Sbjct 141121 TAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 141062 Query 164088 CGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCG 164147 | || | || || ||||| || |||||||||||| |||| || ||||| ||||| Sbjct 141061 CTCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAA 141002 Query 164148 GTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTG 164207 || | ||||| ||||| || |||||||| ||| | || |||||| | |||||||| | Sbjct 141001 GTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCG 140942 Query 164208 GTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTG 164267 |||||| |||| |||| | |||||| | |||| | | |||||||||||||| Sbjct 140941 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTG 140882 Query 164268 AGTGGGAACTTTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTC 164327 ||||||||||| || |||||| |||||||| ||||||||| || |||||||| |||| Sbjct 140881 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTC 140822 Query 164328 CTGTCGCTGCAGCGAGTGCAGT 164349 |||| || || || | ||||| Sbjct 140821 CTGTTGCAGCTGCTACCGCAGT 140800 >seq1029 Length=16155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 218/327 (67%), Gaps = 4/327 (1%) Strand=Plus/Minus Query 165432 GGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTT 165491 ||||| || ||| ||||||| || |||| ||| || || | || | |||||| || | Sbjct 11896 GGGGGTCTGTGGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGTTC 11837 Query 165492 CGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTC 165550 || | || | || || || || || | | || |||| ||| | || ||||| Sbjct 11836 CGTCCCTTCGCGCTTGCTCGCTCTGTTCCCT-TGCGGCCTTCTCCTGCCCTCGCCTTCTC 11778 Query 165551 TGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTG 165610 |||||| ||||||| || ||| ||| || | | | ||| || || | || || Sbjct 11777 TGGTCCCCTTGCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGTTG 11718 Query 165611 GTTCTTCGCACCGTCG-TTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAG 165669 |||||| || || ||| || || ||||| || |||| || ||||| ||||| | | | Sbjct 11717 GTTCTTTGCGCC-TCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCCG 11659 Query 165670 GGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCG 165729 |||| | | ||| | || ||||||| || ||||||| || ||| |||| |||| Sbjct 11658 GGTTTCCTCCTTGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGGGCG 11599 Query 165730 GAGCATTGCTTTCTGCCATTCATGGTG 165756 || ||||| | || ||| ||||| Sbjct 11598 CTGCCTTGCTCTGCGCTCTTCCTGGTG 11572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557630574215760