Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq33599 174 2e-38 seq34423 167 2e-36 seq34042 154 2e-32 seq33157 134 1e-26 seq34050 131 2e-25 seq33279 127 2e-24 seq33260 122 9e-23 seq33488 116 4e-21 seq33714 107 2e-18 seq31522 98.7 1e-15 seq33784 89.7 5e-13 >seq33599 Length=161954 Score = 174 bits (192), Expect = 2e-38 Identities = 319/464 (69%), Gaps = 5/464 (1%) Strand=Plus/Plus Query 116733 ACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCA 116792 ||||| || || || |||||||| || |||||||| |||||| |||||||||||| Sbjct 157310 ACGAGAAGCACTTTATTAAGCACGTACTTGCCTTTTTTGCCGCCTCCGACGGCATCGTTT 157369 Query 116793 ACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC-TTC 116851 |||||||| | || || ||| ||||||| ||| | || ||||||| |||| || Sbjct 157370 TGGAGAATCTTGCCGGACGGTTCATGAAGGAGGTCCAGATTGCGGAGGCGC-GTGCGTTT 157428 Query 116852 TACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGAC 116911 || || || ||||||||||| ||||| | ||||| || ||||| || | || Sbjct 157429 TATGGATTCCAGATCGCCATCGAGAATATCCACTCTGAGATGTACAGTCTTCTGTTGGAG 157488 Query 116912 ACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCG 116971 || ||| | ||| || |||||| | ||||| |||| || || || |||| Sbjct 157489 ACTTACATCAAGGATTCTGAAGAGAAGGATAGGTTGTTCCACGCGATTGATACTGTGCCC 157548 Query 116972 TGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTC 117031 || || | ||||||| ||||||| || || ||||| | ||| || | ||| Sbjct 157549 TGTGTGGAGAAGAAGGCTAAGTGGGCTCTCCGTTGGATTGATGGC---TCGGAATCATTC 157605 Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 | ||||| || |||||||||| || ||||| ||||||| || || ||||| Sbjct 157606 GCTGAGCGTTTGTTGGCCTTCGCTTGTGTTGAGGGGATCTTCTTCTCTGGGAGTTTTTGT 157665 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 || ||||| ||||| || || ||||| | ||||| || || | ||| || ||| | Sbjct 157666 GCTATATTCTGGCTGAAAAAGCGCGGTTTGATGCCGGGGTTGTCCTTCTCGAATGAGTTG 157725 Query 117152 ATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 ||||| | || ||||| |||| ||||| ||||| || |||| Sbjct 157726 ATCTCGCGAGATGAGGGCTTGCACTGCGATTTTGCGTGCATGCT 157769 >seq34423 Length=256361 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || || ||||||||| |||| || || | || Sbjct 118947 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 118888 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| | || |||| ||||| ||||| |||||| ||||||| Sbjct 118887 GACACCATTGACAACG-TCAAAGCTAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 118829 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || |||||||| || |||| ||||||||| ||| ||||| Sbjct 118828 GCAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTCGCCGATTACAA 118769 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || ||||| ||| | || ||||| || ||| Sbjct 118768 CATCCAGAAGGAATCCACTCTCCATCTCGTGCTCCGTTTGAGAGGAGGC 118720 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || ||||||||| |||| || || || Sbjct 119175 ATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACCATCACCCTCGAGGTGGAGAGTTCC 119116 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || |||||| ||||||| Sbjct 119115 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCGGACCA 119057 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || |||||||| || |||| || |||||| ||||||||| Sbjct 119056 GCAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGTACCCTCGCCGACTACAA 118997 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || ||||| ||| | || ||||| || ||| Sbjct 118996 CATCCAGAAGGAATCCACCCTCCATCTCGTGCTCCGTTTGAGAGGAGGC 118948 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || ||||| |||||||| | || || ||| | | Sbjct 118719 ATGCAAATCTTTGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTTGAAAGCTCA 118660 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| || || |||||| | || || Sbjct 118659 GACACAATTGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCA 118601 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| ||||||||||| || |||| || |||||| ||| ||||| Sbjct 118600 GCAGAGGCTTATCTTCGCCGGCAAACAGCTCGAGGACGGCCGTACCCTCGCCGATTACAA 118541 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 118540 CATCCAGAAGGAGTCCACTCTTCA 118517 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || ||||||||||| | || || || | | Sbjct 118492 AATGCAGATTTTCGTGAAGACCCTCACTGGAAAAACCATCACTCTTGAGGTTGAGAGCTC 118433 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | | |||| || |||| ||||| |||||||||||| | ||||| Sbjct 118432 GGACACCATAGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 118373 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | || | || || || || |||| || | | || || || || || Sbjct 118372 GCAGAGGTTGATTTTTGCAGGGAAGCAATTGGAAGATGGAAGGACTCTTGCTGATTATAA 118313 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || ||||| || || Sbjct 118312 CATCCAGAAGGAGTCTACCCTGCACCTTGT 118283 >seq34042 Length=367129 Score = 154 bits (170), Expect = 2e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || || || || || || ||||| || || |||||| |||| || ||| | Sbjct 85947 AAAAATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACGATCACCCTCGAGGTTGAATC 85888 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | | | |||| ||| || | ||||| || |||||||| |||| Sbjct 85887 GTCGGACACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATCCCGCCGGA 85828 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||| Sbjct 85827 CCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTA 85768 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 85767 CAACATCCAGAAGGAGTCCACTCTCCACCTCGT 85735 >seq33157 Length=145522 Score = 134 bits (148), Expect = 1e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| ||||| |||||||| || || || ||| | || || || | Sbjct 121898 AAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACGATAACCCTGGAGGTGGAGTC 121957 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||||| | | | | | |||| ||||||| ||||| ||||| ||||| | || Sbjct 121958 CTCCGACACCATCGACAATGTGAAGGCGAAAATTCAAGACAAGGAGGGAATCCCACCCGA 122017 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| ||| || || |||||||| |||| || ||| | ||||| Sbjct 122018 CCAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGGACCTTGGCGGACTA 122077 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| | || || || || ||| Sbjct 122078 CAACATCCAGAAAGAGTCTACTCTCCACCTGGTG 122111 >seq34050 Length=239353 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||| || || || |||| ||||| | || Sbjct 45018 ATGCAGATCTTTGTGAAAACCCTAACCGGCAAGACTATTACTCTCGAGGTCGAGAGCTCC 44959 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| || || ||||||||||| |||||||| Sbjct 44958 GACACCATCGACAATGTCAAGGCCAAGATTCAAGATAAGGAGGGCATCCCGCCGGACCAG 44899 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| || || || || || |||| || |||||| ||| ||||| Sbjct 44898 CAGAGGCTGATCTTCGCCGGGAAGCAACTCGAGGACGGTCGTACCCTCGCCGATTACAAT 44839 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| || ||| | || | || |||||||| || Sbjct 44838 ATCCAGAAGGAGTCCACCCTTCATTTGGTTCTCCGATTGAGGGGAGG 44792 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || |||||||||||| | || || ||| | | Sbjct 44335 AATGCAGATTTTCGTGAAGACTCTCACCGGGAAAACCATCACCCTGGAGGTGGAAAGCTC 44276 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | |||| | |||| || || | ||||| || |||||||| | |||| Sbjct 44275 CGATACTATTGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACC 44217 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || | ||||||| || ||||| ||||| || || | || || || |||||||| Sbjct 44216 AACAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTGCCGACTACA 44157 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||||||| |||| || || Sbjct 44156 ACATTCAGAAGGAGTCCACCCTTCA 44132 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| || || ||| | || || ||| | || Sbjct 44790 ATGCAGATCTTCGTTAAAACCCTAACCGGCAAGACGATTACCTTGGAGGTTGAAAGCTCC 44731 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || |||| | || | || || | ||||| ||||| ||||| | ||||| Sbjct 44730 GATACGATTGACAACG-TGAAAGCTAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCA 44672 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||| | ||| || || ||||| || |||| || ||||| || ||||| Sbjct 44671 GCAGAGGCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGAACCCTAGCGGATTACAA 44612 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| || ||| | || | || |||||||| || Sbjct 44611 TATCCAGAAGGAGTCCACCCTTCATTTGGTTCTCCGATTGAGGGGAGG 44564 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || ||||||||||| || || ||| | || || ||| | | Sbjct 44107 AATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATTACCCTGGAGGTGGAAAGCTC 44048 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | |||| | |||| ||||||| ||||| ||||| || || |||| | Sbjct 44047 CGACACAATTGATAACG-TGAAGGCTAAAATTCAAGACAAGGAGGGGATTCCACCGGATC 43989 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | | |||| || || || ||||| || || | | || || |||||| | Sbjct 43988 AGCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTGGCCGACTATA 43929 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| |||| ||||| || || Sbjct 43928 ACATCCAGAAGGAGTCCACTCTGCACCTTGT 43898 >seq33279 Length=59633 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||||||||| || |||||| | || || || | | Sbjct 12457 ATGCAGATCTTCGTGAAAACCCTCACGGGCAAGACAATCACCCTGGAGGTTGAGAGCTCT 12398 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||| |||||| | ||||| Sbjct 12397 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 12339 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| || || || ||||| || || | || ||||| || ||||| Sbjct 12338 GCAAAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGATTACAA 12279 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || || | ||| | || |||||||| ||| Sbjct 12278 CATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTTTGAGGGGAGGC 12230 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||| |||||||| |||| ||||| || Sbjct 13141 ATGCAGATCTTTGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGTTCC 13082 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| ||||| || ||| | ||||| Sbjct 13081 GACACCATCGACAACGTT-AAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 13023 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | || |||| ||| || || ||||| || |||| || |||||| ||| ||||| Sbjct 13022 GCAAAGGCTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGTACCCTCGCCGATTACAA 12963 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || || || | ||| | || | ||||| || Sbjct 12962 CATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTCAGGGGTGG 12915 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| || || ||||| || |||| || || | | Sbjct 12685 ATGCAGATCTTCGTGAAAACCCTCACCGGAAAGACCATAACTCTCGAGGTTGAGAGCTCT 12626 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| ||||| || ||| | ||||| Sbjct 12625 GACACCATTGACAACGTT-AAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 12567 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||||| || || | || ||||| ||| ||||| Sbjct 12566 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAA 12507 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || || | ||| | || |||||||| ||| Sbjct 12506 CATCCAGAAGGAATCCACTCTCCACTTGGTGCTCCGTTTGAGGGGTGGC 12458 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| || || || ||||| |||| ||||| | || Sbjct 12913 ATGCAGATCTTCGTCAAAACCCTCACCGGAAAGACAATCACTCTCGAGGTCGAGAGCTCC 12854 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||| || ||| | ||||| Sbjct 12853 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 12795 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||||| || || | || ||||| ||| ||||| Sbjct 12794 GCAGAGGTTGATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAA 12735 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 12734 TATCCAGAAGGAGTCAACTCTCCACTTGGTGCTCCGTCTCAGGGGTGG 12687 >seq33260 Length=58559 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || ||||| || || || ||| | || || || | Sbjct 34202 AAAATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATAACCCTAGAGGTGGAGTCA 34143 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | ||||| ||||||||||| | ||| Sbjct 34142 TCGGACACCATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGAC 34083 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| ||| || || ||||| || |||| ||||||||| |||||| Sbjct 34082 CAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCCTTGCAGACTAC 34023 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| |||||| | || || || || || | ||| | | ||||| Sbjct 34022 AACATCCAAAAGGAGTCTACCCTCCACCTCGTCCTTCGCCTCCGCGGCGG 33973 >seq33488 Length=63435 Score = 116 bits (128), Expect = 4e-21 Identities = 190/272 (70%), Gaps = 15/272 (6%) Strand=Plus/Minus Query 116616 TCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGA 116675 |||| || |||||||| || || ||| |||||||| || |||||||| || ||||||| Sbjct 35707 TCCCAATCCAATACCCTGAGATTTGGGAGATGTACAAGAAAGCCGAGGCCTCTTTCTGGA 35648 Query 116676 CCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACG 116735 | | || || ||||| || || ||||| | ||||||| | | | | ||| Sbjct 35647 CTGCTGAAGAAGTGGATCTCTCTCAGGACCTCAATCACTGGGATACCCTCACTCCCGACG 35588 Query 116736 AGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACG 116795 || || ||||| ||||||||||| || || || |||||| |||||||| || | Sbjct 35587 AGAAACACTTCATTAAGCACGTGCTTGCTTTCTTTGCCGCCTCTGACGGCATTGTTTTAG 35528 Query 116796 AGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC-TTCTAC 116854 |||| || || | ||||| ||||| ||||||| | |||| |||||| Sbjct 35527 AGAACCT--ATGA-----------AAGAGGTCCAGGTCTCCGAGGCTC-GTGCGTTCTAC 35482 Query 116855 GGCTTTCAGATCGCCATGGAGAACGTGCACTC 116886 ||||| || |||||||| |||||| | ||||| Sbjct 35481 GGCTTCCAAATCGCCATCGAGAACATCCACTC 35450 >seq33714 Length=161502 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || |||||||| || || || ||||||||| | || || || | Sbjct 22856 ATGCAGATCTTTGTCAAAACGCTAACTGGGAAGACCATCACCCTGGAGGTTGAGAGTTCA 22915 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| ||| || | ||||| || ||||| || | ||||| Sbjct 22916 GATACCATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGACCAA 22975 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || || ||||||||||| || | | | || || ||||||||| Sbjct 22976 CAGCGTTTGATCTTTGCAGGTAAACAGCTGGATGATGGGAGGACACTTGCAGACTACAAC 23035 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||||||| | ||||| ||| | ||| |||| |||||||| || Sbjct 23036 ATTCAGAAGGAGTCTACGCTCCATTTGGTGCTGCGATTGAGGGGGGG 23082 >seq31522 Length=43835 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || ||||| |||||| | || || ||| | | Sbjct 28946 ATGCAAATCTTTGTGAAAACTCTGACTGGGAAAACGATCACCCTAGAAGTTGAAAGCTCA 29005 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | |||| ||||||| |||| ||| || || || | || || Sbjct 29006 GATACAATTGATAACG-TGAAGGCGAAAATTCAGGACAGAGAAGGAATTCCTCCAGATCA 29064 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | || | |||||| |||||||| || || | || ||||| ||| ||||| Sbjct 29065 GCAGAGGTTGATTTTCGCGGGTAAACAGCTCGAGGATGGCCGAACCCTAGCCGATTACAA 29124 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || | ||||||||||| || || | ||| | || || Sbjct 29125 TATCCAGAAAGAATCGACGCTGCATCTGGTTCTGAGGTTGCGCGGTGG 29172 >seq33784 Length=161669 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| || ||||| || | |||||||| ||||| || | || ||||| Sbjct 105284 AAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAGCAGCGACTGATTTTTGCTGGCAA 105343 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | | | || || ||||||||||| || |||||| | || || || Sbjct 105344 GCAGCTCGATGATGGGAGGACACTTGCAGACTACAACATTCAAAAGGAGTCAACACTCCA 105403 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 | ||||| |||| ||||||| || Sbjct 105404 TTTAGTGCTGCGACTGAGGGGAGG 105427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| || ||||| ||| | || ||||| ||||| || | || ||||| Sbjct 105512 AAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGCGACTGATTTTTGCTGGCAA 105571 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | | | || || ||||||||||| || |||||| | || || || Sbjct 105572 GCAGCTCGAGGATGGGAGGACACTTGCAGACTACAACATTCAAAAGGAGTCAACACTCCA 105631 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 | | ||| |||| ||||||| || Sbjct 105632 TTTGGTGCTGCGTCTGAGGGGAGG 105655 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| || || || || | |||||||| ||||| || | || || || Sbjct 105740 AAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGACTGATTTTTGCTGGTAA 105799 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || || | ||||||||| ||||| ||||||||||||||| |||| || || Sbjct 105800 GCAACTTGAGGATGGGCGCACCCTTGCAGACTATAACATCCAGAAGGAGTCCACCCTTCA 105859 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922 || ||| | || | | || || ||||| Sbjct 105860 CCTTGTGCTTCGTCTTCGTGGTGGTGGCTT 105889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514720725424000