Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq34376 91.5 1e-13 >seq34376 Length=372974 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 |||||||| ||||| || || |||| || || ||||||||||| |||||||| || Sbjct 263069 ACATGGGCAATCATGCATGTCAATAATGAGTAAGATGCAATGTTAAATGGCACCCCAAGA 263010 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239 |||||||| || || | |||||| | |||||||| |||| |||| | ||| ||||| Sbjct 263009 CCCATATCTGCAGAGCGTTGATACATTTGACAGGATAGCTCACCATTAGCTACAAAAAAC 262950 Query 97240 TGA 97242 ||| Sbjct 262949 TGA 262947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346456874318000