Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq33753 84.2 2e-11 >seq33753 Length=114126 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||| | ||||||||||| |||||| || |||| || |||||| ||| || ||| Sbjct 59593 CGTTTGTTGGCCTTTGCTTGTGTTGAGGGGATCATCTTCTCTGGGAGTTTTTGTGCTATA 59652 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 ||||||||||| || || | ||||| | |||| | || || || |||||||| Sbjct 59653 TTCTGGCTGAAAAAGCGCGGTTTGATGCCGGAGTTGTCCTTCTCGAATGAGTTGATCTCG 59712 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGC 22906 || || || || | ||||| || |||||||| ||||| | | ||| Sbjct 59713 CGAGATGAGGGGTTGCACTGCGATTTTGCTTGCATGCTCTATGGGC 59758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355897560392200