Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq34359 122 5e-23 seq34168 118 6e-22 seq33945 118 6e-22 seq34342 116 2e-21 seq33933 114 7e-21 seq33639 113 2e-20 seq34128 111 8e-20 seq33687 111 8e-20 seq32963 111 8e-20 seq32115 111 8e-20 seq34383 107 1e-18 seq34230 107 1e-18 seq33836 107 1e-18 seq23713 107 1e-18 seq34449 105 3e-18 seq34394 105 3e-18 seq34000 104 1e-17 seq32839 104 1e-17 seq34275 102 4e-17 seq34156 102 4e-17 seq29794 102 4e-17 seq27057 102 4e-17 seq24343 102 4e-17 seq34145 100 1e-16 seq34245 93.3 2e-14 seq20290 93.3 2e-14 seq34096 91.5 8e-14 seq29770 91.5 8e-14 seq29705 86.0 3e-12 seq8947 86.0 3e-12 seq8498 86.0 3e-12 seq3301 84.2 1e-11 seq28698 82.4 4e-11 seq25284 82.4 4e-11 seq18703 82.4 4e-11 seq12720 82.4 4e-11 seq109 82.4 4e-11 >seq34359 Length=375002 Score = 122 bits (134), Expect = 5e-23 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| ||| |||||| ||||||||||||| | | |||||||| ||||||||||||||||| Sbjct 131291 AATGAATTAAAAAT-AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 131233 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 131232 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 131200 >seq34168 Length=93452 Score = 118 bits (130), Expect = 6e-22 Identities = 88/102 (86%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 ||||||||| |||| ||||| |||||||||| | | |||||||| |||||||||| Sbjct 29811 AATATAGAAA-AATATAAAAT----TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGC 29865 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||||||||| ||||||||||||||| |||||| Sbjct 29866 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCGT 29907 >seq33945 Length=101624 Score = 118 bits (130), Expect = 6e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||| || ||||||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 5164 AATAAATAACAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 5223 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 5224 GACGCTCTAACCAACTGAGCTAATAGGCC 5252 >seq34342 Length=184756 Score = 116 bits (128), Expect = 2e-21 Identities = 78/87 (90%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||||||| |||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 18655 AAAAATCAAATTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 18596 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 18595 CGCTCTAACCAACTGAGCTAATAGGCC 18569 Score = 109 bits (120), Expect = 3e-19 Identities = 83/98 (85%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 || |||| |||| || ||| |||||||||| | | |||||||| |||||||||||| Sbjct 63107 AGGATTACAAAAATATTAAAGATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGT 63048 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| ||||||||||||||| |||| Sbjct 63047 TATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 63010 >seq33933 Length=146745 Score = 114 bits (126), Expect = 7e-21 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 || ||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 59565 TAGAAAATAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 59624 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 59625 CGCTCTAACCAACTGAGCTAATAGGCC 59651 >seq33639 Length=116699 Score = 113 bits (124), Expect = 2e-20 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| |||| ||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 2505 AAAAGCAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 2564 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||||| |||| Sbjct 2565 TCTAACCAACTGAGCTAATAGGCC 2588 >seq34128 Length=87000 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 60713 AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 60772 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 60773 CAACTGAGCTAATAGGCC 60790 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 81954 AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 81895 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 81894 CAACTGAGCTAATAGGCC 81877 >seq33687 Length=271835 Score = 111 bits (122), Expect = 8e-20 Identities = 79/89 (89%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| ||||| ||||| |||||||| | | |||||||| ||||||||||||||||||||| Sbjct 168602 AATCAAAAA-CAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 168545 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 168544 GACGCTCTAACCAACTGAGCTAATAGGCC 168516 >seq32963 Length=86082 Score = 111 bits (122), Expect = 8e-20 Identities = 76/86 (88%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| ||||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 39736 AAAAAAT---ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 39680 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 39679 GCTCTAACCAACTGAGCTAATAGGCC 39654 >seq32115 Length=25378 Score = 111 bits (122), Expect = 8e-20 Identities = 80/93 (86%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| | | |||||| ||| ||||||||| | | |||||||| ||||||| ||||||||| Sbjct 16502 AATCATTCAAAAATAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTTGCGTTATTA 16443 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 16442 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 16410 Score = 109 bits (120), Expect = 3e-19 Identities = 95/116 (82%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 11434 TAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 ||||| | || |||| |||| |||||||| | | |||||||| |||||||||||||| Sbjct 12865 TAGAAATCATTCAAAAAGAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTA 12807 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC-GTCGACGATTGTGATTTTT 11548 ||||||||||||||| ||||||||||||||| |||| | | | ||||| ||| || Sbjct 12806 TTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCAATTGGCTATTGTTATTATT 12751 >seq34383 Length=166221 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 41933 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 41874 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 41873 CAACTGAGCTAATAGGCC 41856 >seq34230 Length=150014 Score = 107 bits (118), Expect = 1e-18 Identities = 76/87 (87%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| |||| ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 127750 AAAAAGAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 127809 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 127810 CGCTCTAACCAACTGAGCTAATAGGCC 127836 >seq33836 Length=89783 Score = 107 bits (118), Expect = 1e-18 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| || ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 76623 AAAAAT-AATTTGGCCCATACAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 76681 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||| |||| Sbjct 76682 CTCTAACCAACTGAGCTAATAGGCC 76706 >seq23713 Length=3450 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 2230 AAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 2289 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 2290 CAACTGAGCTAATAGGCC 2307 >seq34449 Length=443203 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 379310 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 379251 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 379250 CTGAGCTAATAGGCC 379236 >seq34394 Length=320177 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 220580 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 220521 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 220520 AACTGAGCTAATAGGCC 220504 >seq34000 Length=265830 Score = 104 bits (114), Expect = 1e-17 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| || || |||||||||| | | |||||||| |||||||||| ||||||||||||| Sbjct 46841 AAAATAT-AATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCATTATTAGCACGAC 46783 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 46782 GCTCTAACCAACTGAGCTAATAGGCC 46757 >seq32839 Length=82606 Score = 104 bits (114), Expect = 1e-17 Identities = 86/104 (83%), Gaps = 5/104 (5%) Strand=Plus/Plus Query 11426 GGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCT 11485 || |||||||||| || | ||| | |||| ||||| | | |||||||| |||||| Sbjct 40749 GGTAAATATAGAAA-AACATAAATT----TTGGACCATGCAGGTCTCGAACCTGCGACCT 40803 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 40804 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 40847 >seq34275 Length=412260 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 133435 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 133376 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 133375 CAGCTGAGCTAATAGGCC 133358 >seq34156 Length=176942 Score = 102 bits (112), Expect = 4e-17 Identities = 78/93 (84%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 11441 AATAAAA----AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||||| |||||||||||||||| | | || ||||| |||||||||||||||| Sbjct 54440 AATAAAATGGGAATCAAATTGGCCCATACAGGTCTCAAACCTGTGACCTTCGCGTTATTA 54499 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||| ||||||||||||||| |||| Sbjct 54500 GCACGGCGCTCTAACCAACTGAGCTAATAGGCC 54532 >seq29794 Length=43450 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||||||| | | |||||||| |||||||||||||||||||||||||||| || Sbjct 9010 AAATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 9069 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 9070 CAACTGAGCTAATAGGCC 9087 >seq27057 Length=5432 Score = 102 bits (112), Expect = 4e-17 Identities = 75/88 (85%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 1948 ATAAAAAAT----TTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACG 1893 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||||||||||||| |||| Sbjct 1892 ACGCTCTAACCAACTGAGCTAATAGGCC 1865 >seq24343 Length=3798 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||||||| | | |||||||| |||||||||||||||||||||||||||| || Sbjct 584 AAATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 643 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 644 CAACTGAGCTAATAGGCC 661 >seq34145 Length=237221 Score = 100 bits (110), Expect = 1e-16 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| | |||| || ||||||||| | | || ||||| ||||||||||||||||||| Sbjct 101169 TTAAAAGAAAAATAA--TGGCCCATGCAGGTCTCCAACCTGCGACCTTCGCGTTATTAGC 101226 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 101227 ACGACGCTCTAACCAACTGAGCTAATAGGCC 101257 >seq34245 Length=200709 Score = 93.3 bits (102), Expect = 2e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || ||||||||| | | |||||||| ||||||||||||||||||||||| |||| || Sbjct 61752 AAGTTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACACTCTAAC 61693 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 61692 CAACTGAGCTAATAGGCC 61675 >seq20290 Length=2985 Score = 93.3 bits (102), Expect = 2e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || ||||||||| | | |||||||| |||||||||||||||||||| ||||||| || Sbjct 235 AATTTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACAACGCTCTAAC 176 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 175 CAACTGAGCTAATAGGCC 158 >seq34096 Length=163158 Score = 91.5 bits (100), Expect = 8e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| Sbjct 87581 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 87639 >seq29770 Length=10235 Score = 91.5 bits (100), Expect = 8e-14 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 11446 AAAATCAAATTG-GCCCATGAAAGGA-TCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| |||||| ||||||| |||| || ||||| |||||||||||||||||||||| Sbjct 5496 AAAAACAAATTTAGCCCATGTAAGGTCTCAAACCTGCGACCTTCGCGTTATTAGCACGTT 5555 Query 11504 GCTCTRACCAACTGAGCTAAT 11524 ||||| ||||||||||||||| Sbjct 5556 GCTCTAACCAACTGAGCTAAT 5576 >seq29705 Length=18624 Score = 86.0 bits (94), Expect = 3e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| ||| || | |||||||| |||||||||||||||||||||||||||| |||||| Sbjct 446 TGGCTCATAAAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 505 Query 11516 TGAGCTAAT 11524 ||||| ||| Sbjct 506 TGAGCGAAT 514 Score = 86.0 bits (94), Expect = 3e-12 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 5352 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAAT 5405 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 || ||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 7954 TCTAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAAT 8007 Score = 82.4 bits (90), Expect = 4e-11 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 11473 GAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 10329 GAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAAT 10380 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 18494 TCGAACCTGTGACCTTCGCGTTATTAGCACGATGCTCTAACCAACTGAGCTAAT 18547 >seq8947 Length=2687 Score = 86.0 bits (94), Expect = 3e-12 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 9 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAAT 62 >seq8498 Length=2682 Score = 86.0 bits (94), Expect = 3e-12 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 143 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAAT 90 >seq3301 Length=20013 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| | ||||||| | | |||||||| ||||||||||||||||||||| ||||||| || Sbjct 9596 AAACTAGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACAACGCTCTAAC 9655 Query 11512 CAACTGAG 11519 |||||||| Sbjct 9656 CAACTGAG 9663 >seq28698 Length=11760 Score = 82.4 bits (90), Expect = 4e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| ||| | | ||||||| | |||||||||||||||||||| ||||||| |||||| Sbjct 6633 TGGCTCATACAGGTATCGAACTTGTGACCTTCGCGTTATTAGCACTACGCTCTAACCAAC 6692 Query 11516 TGAGCTAAT 11524 ||||||||| Sbjct 6693 TGAGCTAAT 6701 >seq25284 Length=5146 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 2732 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTAAGCTAAT 2679 >seq18703 Length=2909 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 2764 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCAAAT 2817 >seq12720 Length=10148 Score = 82.4 bits (90), Expect = 4e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| ||| ||| |||||||| ||| ||||||||||||||||||||||| |||||| Sbjct 9943 TGGCTCATACAAGTCTCGAACCTGTGACATTCGCGTTATTAGCACGACGCTCCAACCAAC 10002 Query 11516 TGAGCTAAT 11524 ||||||||| Sbjct 10003 TGAGCTAAT 10011 >seq109 Length=10047 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct 118 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTGTAACCAACTGAGCTAAT 65 Lambda K H 0.637 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261244532082400