Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq30018 86.0 2e-12 >seq30018 Length=17342 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 19739 GAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATT 19798 |||| || | ||||||||||| | | | | | ||||| || || ||| | |||| Sbjct 7153 GAGTAGTATTAATGGTATGCCTTTAAAAAATTTTAGAACTTTCAATTTCATGATTGTATC 7212 Query 19799 CCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATT 19858 ||| || || ||||| | |||| ||| || || || ||| | ||||| ||||| ||||| Sbjct 7213 CCAGGCCGAGCACAACACTCTTACGCACCCATTTCATATGTTAGGTGTAGCTGGTGTATT 7272 Query 19859 CGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || ||| ||||| || | ||||||||| || Sbjct 7273 CGATGGCTCTCTATTATGTGCTATGCATGG 7302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144308840114400