Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq33279 84.2 2e-11 >seq33279 Length=59633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||| |||||||| | || ||| | Sbjct 12001 ATGCAGATATTTGTGAAGACCCTGACTGGAAAGACCATTACTTTGGAGGTGGAAAGCTCT 11942 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || ||| || || || ||| |||| ||||| Sbjct 11941 GACACTATTG-ACAATGTGAAAGCCAAGATTCAAGACAAGGAGGGCATCCCACCAGATCA 11883 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || || | ||| || || || || ||||||| | || |||| |||||||| Sbjct 11882 GCAGAGGCTGATCTTTGCTGGAAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTATAA 11823 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || |||||||| || Sbjct 11822 CATCCAGAAAGAGTCCAC 11805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424942767688000