Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq34423 134 1e-26 seq33714 131 1e-25 seq33784 122 7e-23 seq33157 120 3e-22 seq34050 118 9e-22 seq33279 116 3e-21 seq31522 116 3e-21 >seq34423 Length=256361 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| |||| || || || |||| || || ||||| | | || Sbjct 118947 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 118888 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | ||||| || ||||| ||||||||||| || || || || || Sbjct 118887 GACACCATTGACAACGTCAAAGCTAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 118828 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| |||||| | ||||| ||||||| || ||||||||||| Sbjct 118827 CAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTCGCCGATTACAAC 118768 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || |||||||| | ||| | || | || ||| | ||||| Sbjct 118767 ATCCAGAAGGAATCCACTCTCCATCTCGTGCTCCGTTTGAGAGGAGG 118721 Score = 123 bits (136), Expect = 2e-23 Identities = 176/247 (71%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 22199 AGTTTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCA 22258 |||||| | ||||| | |||||| || || || ||||| ||||||| || || ||| Sbjct 119193 AGTTTTGGATATTTGCA--GATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACCATCA 119136 Query 22259 CTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGG 22318 | || || ||||| | |||| ||| | ||| | |||| || || |||||||||| Sbjct 119135 CCCTCGAGGTGGAGAGTTCCGACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGG 119076 Query 22319 AGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACC 22378 | || || || || || || || | || || || ||||| |||||| | ||||| || Sbjct 119075 AAGGAATCCCCCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCC 119016 Query 22379 GCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGC 22438 | ||| || |||| |||||||| || || ||||||||| | ||| | || | || ||| Sbjct 119015 GTACCCTCGCCGACTACAACATCCAGAAGGAATCCACCCTCCATCTCGTGCTCCGTTTGA 118956 Query 22439 GCGGAGG 22445 | ||||| Sbjct 118955 GAGGAGG 118949 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| ||||||| || || ||||||| || || |||| | | Sbjct 118719 ATGCAAATCTTTGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTTGAAAGCTCA 118660 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || |||||||| || || || || ||||| Sbjct 118659 GACACAATTGATAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 118600 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || |||||||||||| | ||||| ||| ||| || ||||||||||| Sbjct 118599 CAGAGGCTTATCTTCGCCGGCAAACAGCTCGAGGACGGCCGTACCCTCGCCGATTACAAC 118540 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 118539 ATCCAGAAGGAGTCCAC 118523 >seq33714 Length=161502 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| | || || || || ||||||||||||| || | | | Sbjct 22628 ATGCAGATCTTTGTGAAAACTCTTACTGGCAAGACCATCACTCTTGAAGTTGAGAGCTCG 22687 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || |||||||| ||||| || ||||| || |||||| Sbjct 22688 GATACCATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 22747 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || || ||| | || ||| || || | | ||||||||| Sbjct 22748 CAAAGGCTGATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACACTTGCTGATTACAAC 22807 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||| |||||| | ||| | || | || |||| || || Sbjct 22808 ATCCAAAAAGAGTCCACCCTCCATCTTGTCCTCCGCCTGCGTGGTGG 22854 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| |||| || || || |||| || || || || | | Sbjct 22856 ATGCAGATCTTTGTCAAAACGCTAACTGGGAAGACCATCACCCTGGAGGTTGAGAGTTCA 22915 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || ||| || ||||||||||| || ||||| || || ||| Sbjct 22916 GATACCATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGACCAA 22975 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || |||||| | || ||| | || | | || |||||| Sbjct 22976 CAGCGTTTGATCTTTGCAGGTAAACAGCTGGATGATGGGAGGACACTTGCAGACTACAAC 23035 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | ||||| || |||||||| | || ||| Sbjct 23036 ATTCAGAAGGAGTCTACGCTCCATTTGGTGCTGCGATTGAGGGGGGGT 23083 >seq33784 Length=161669 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||| || || || |||| | |||||||| | | | Sbjct 105201 ATGCAGATCTTTGTCAAGACCTTAACTGGGAAGACCATCACATTGGAAGTGGAGAGCTCA 105260 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | ||| ||| ||||| |||||||| || ||||| || || || Sbjct 105261 GATACAATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 105320 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | || ||| | || | | || |||||| Sbjct 105321 CAGCGACTGATTTTTGCTGGCAAGCAGCTCGATGATGGGAGGACACTTGCAGACTACAAC 105380 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || | |||||||| ||||| || | ||||| Sbjct 105381 ATTCAAAAGGAGTCAACACTCCATTTAGTGCTGCGACTGAGGGGAGG 105427 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || || || || || || |||||||||| ||||| | | Sbjct 105428 GATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACCATCACTCTTGAGGTGGAGAGTTC 105487 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | ||| ||| ||||| |||||||| || ||||| || ||||| Sbjct 105488 TGATACTATTGATAATGTTAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCA 105547 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || || || ||||| ||||| ||| | |||||| | || | | || ||||| Sbjct 105548 GCAGCGACTGATTTTTGCTGGCAAGCAGCTCGAGGATGGGAGGACACTTGCAGACTACAA 105607 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||| || || || | ||||| || |||| || | ||||| Sbjct 105608 CATTCAAAAGGAGTCAACACTCCATTTGGTGCTGCGTCTGAGGGGAGG 105655 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || ||||| || || || ||||| | ||||| || | | | Sbjct 104655 GATGCAGATCTTTGTCAAGACCTTAACAGGGAAGACCATCACTTTAGAAGTAGAGAGCTC 104714 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | ||| || | ||| || ||||| || ||||| |||||||| || ||||| Sbjct 104715 AGATACTATTGACAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCTCCAGATCA 104774 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||| | || || ||||| || || ||| | || || || ||| | | ||||| || Sbjct 104775 ACAAAGACTGATCTTTGCTGGTAAGCAGCTTGATGACGGGCGTACCCTTGCTGATTATAA 104834 Query 22398 CATTCAAAAAGAATCCAC 22415 ||||||||| ||||| || Sbjct 104835 CATTCAAAAGGAATCAAC 104852 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || ||||| || || | || || || || |||| | |||||||| | Sbjct 104423 TACAGATGCAGATCTTTGTAAAGACACTCACAGGGAAGACCATCACATTGGAAGTGGAGA 104482 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || || | ||| | | ||| ||| || ||||| ||||| || ||||| || | Sbjct 104483 GCTCAGACACAATTGACAACGTTAAAGCAAAGATCCAAGATAAGGAAGGCATTCCCCCAG 104542 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | || || | || || ||||||||||| ||| | |||||| | || | | || | Sbjct 104543 ACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTAGGACACTTGCAGACT 104602 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||| ||||| || || || || | |||||||| |||| || | ||||| Sbjct 104603 ACAATATTCAGAAGGAGTCAACACTCCATTTAGTGCTGCGCCTGAGGGGAGG 104654 >seq33157 Length=145522 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| | || || || ||| | || || || ||||| | Sbjct 121898 AAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACGATAACCCTGGAGGTGGAGTC 121957 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| ||| | ||| || | || |||||||||||||||||||| || |||||||| Sbjct 121958 CTCCGACACCATCGACAATGTGAAGGCGAAAATTCAAGACAAGGAGGGAATCCCACCCGA 122017 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| || ||| | ||||| ||| ||| | | || || Sbjct 122018 CCAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGGACCTTGGCGGACTA 122077 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || ||||| || || Sbjct 122078 CAACATCCAGAAAGAGTCTAC 122098 >seq34050 Length=239353 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || |||||||| ||||||| || ||| | || | || || |||| | | Sbjct 44791 GATGCAGATCTTCGTTAAAACCCTAACCGGCAAGACGATTACCTTGGAGGTTGAAAGCTC 44732 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| | | ||| || || || ||||||||||| || || || || || Sbjct 44731 CGATACGATTGACAACGTGAAAGCTAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCA 44672 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || || ||||| || ||| | ||||| ||| ||| | | |||||||| Sbjct 44671 GCAGAGGCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGAACCCTAGCGGATTACAA 44612 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | ||||| ||| | |||||| | ||||| Sbjct 44611 TATCCAGAAGGAGTCCACCCTTCATTTGGTTCTCCGATTGAGGGGAGG 44564 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | ||||| ||||| |||| || || ||||||| | || Sbjct 44334 ATGCAGATTTTCGTGAAGACTCTCACCGGGAAAACCATCACCCTGGAGGTGGAAAGCTCC 44275 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | || || || || |||||||| || || || || || ||| Sbjct 44274 GATACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAA 44215 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | |||||| ||| || | |||| |||||| Sbjct 44214 CAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTGCCGACTACAAC 44155 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || |||||| | || || || Sbjct 44154 ATTCAGAAGGAGTCCACCCTTCACTTGGT 44126 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || |||||||| ||||||| || || | || | || || |||| | | Sbjct 44563 GATGCAGATCTTCGTTAAAACCCTAACCGGCAAGACTATTACCTTGGAGGTTGAAAGCTC 44504 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| | | || || || |||||||||||||| || || || || || Sbjct 44503 TGACACCATAGACAACGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 44444 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | ||||| || ||||| || ||| | ||||| ||| ||| | |||| ||||| Sbjct 44443 GCAGAGGCTTATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGAACCCTAGCCGACTACAA 44384 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || ||||||||| | ||||| || || | | || ||||| Sbjct 44383 TATTCAGAAGGAATCCACCCTTCATTTGGTGCTGAGGCTCCGTGGAGG 44336 >seq33279 Length=59633 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268 |||| || ||||||| || ||||| ||||| ||||||| || || ||||||| || || Sbjct 13151 ATTTATACAGATGCAGATCTTTGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGT 13092 Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 || | |||| ||| | ||| | | || || || || ||||||||||| ||||| Sbjct 13091 CGAGAGTTCCGACACCATCGACAACGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCC 13032 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 || || || ||| | || || || ||||| || ||| | || || ||| ||| || | Sbjct 13031 CCCAGACCAGCAAAGGCTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGTACCCTCGC 12972 Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||||||| || || || || ||| | || || || Sbjct 12971 CGATTACAACATCCAGAAGGAGTCAACCCTCCACTTGGT 12933 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || ||||||| | || Sbjct 12229 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCC 12170 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || |||||| || ||||| || || ||||| || ||||| Sbjct 12169 GACACAATTGATAACGTGAAGGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 12110 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || || || || ||| | |||||| ||||||| | | ||||||||| Sbjct 12109 CAGAGGCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTTGCTGATTACAAC 12050 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || || ||| | ||||| || Sbjct 12049 ATTCAGAAGGAGTCTACCCTTCATTTGGT 12021 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || || |||| || || || || | | | Sbjct 12457 ATGCAGATCTTCGTGAAAACCCTCACGGGCAAGACAATCACCCTGGAGGTTGAGAGCTCT 12398 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 12397 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 12338 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || ||| | |||||| ||| ||| | | ||||||||| Sbjct 12337 CAAAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGATTACAAC 12278 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||||||| | || || || | || ||| | ||||| Sbjct 12277 ATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTTTGAGGGGAGG 12231 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || | ||| | || ||||||| | | Sbjct 12001 ATGCAGATATTTGTGAAGACCCTGACTGGAAAGACCATTACTTTGGAGGTGGAAAGCTCT 11942 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || ||||||||||||||||| || ||||| ||||| Sbjct 11941 GACACTATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAGGGCATCCCACCAGATCAG 11882 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||||| || ||| | || | | ||||| ||| Sbjct 11881 CAGAGGCTGATCTTTGCTGGAAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTATAAC 11822 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || ||||| |||||| | || | ||| | || | || || ||||| Sbjct 11821 ATCCAGAAAGAGTCCACCCTGCACCTTGTTCTCCGTCTCCGTGGTGGTTT 11772 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || ||||| | ||||| || || | ||||| || || || | | | Sbjct 12686 GATGCAGATCTTCGTGAAAACCCTCACCGGAAAGACCATAACTCTCGAGGTTGAGAGCTC 12627 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 12626 TGACACCATTGACAACGTTAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 12567 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| || ||| | |||||| ||| ||| | |||||||||| Sbjct 12566 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAA 12507 Query 22398 CATTCAAAAAGAATCCAC 22415 ||| || || |||||||| Sbjct 12506 CATCCAGAAGGAATCCAC 12489 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || ||||| | ||||| || || ||||||| || || || | | | Sbjct 12914 GATGCAGATCTTCGTCAAAACCCTCACCGGAAAGACAATCACTCTCGAGGTCGAGAGCTC 12855 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 12854 CGACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 12795 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| || ||| | |||||| ||| ||| | |||||||||| Sbjct 12794 GCAGAGGTTGATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAA 12735 Query 22398 CATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 12734 TATCCAGAAGGAGTCAAC 12717 >seq31522 Length=43835 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || ||||| || || || | ||||| || || || | | || Sbjct 29174 ATGCAGATATTCGTGAAGACATTAACTGGGAAGACAATTACTCTGGAGGTTGAGAGCTCC 29233 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||||| ||||||||||| || ||||| || ||||| Sbjct 29234 GATACAATTGATAATGTCAAGGCGAAAATCCAAGACAAGGAAGGCATTCCTCCAAATCAA 29293 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | |||||||| || |||||| | |||||| ||||| | ||||||||||| Sbjct 29294 CAGCCCTTGATATTTGCAGGGAAACAGCTTGAGGATGGGCGCACTCTTGCCGATTACAAC 29353 Query 22399 ATTCAAAAAGAATCCAC 22415 |||| || |||||||| Sbjct 29354 ATTCTTAAGGAATCCAC 29370 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| || || |||| ||| | |||| || || | | || Sbjct 28718 ATGCAGATCTTCGTCAAAACCTTCACTCGTAAGACGATTTCTCTGGAGGTCAAGAGATCC 28777 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| || ||||||||||||||||||||||| || ||||| Sbjct 28778 GATACGATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCGCCGGATCAG 28837 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||| | |||||| | ||||| || ||| | | |||||||| Sbjct 28838 CAGCGATTGATTTTCGCCCGGAAACAGCTCGAGGACGGACGTACCCTAGCTGATTACAAT 28897 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| | | | ||||||||| Sbjct 28898 ATACAGAAGGAGTCTACTCTCCACCTCGTTCTCCCTCTTCGCGGAGGT 28945 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| || |||||||| || | |||| || || |||| || Sbjct 34506 ATGCATATCTTCGTCAAAACCTTTACCGGTAAGACAATTTCTCTCGAGGTCGAAAAATCC 34565 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | | | || |||| |||||||||| ||||||||||||||| || ||||| Sbjct 34566 GATACGATCGGCAATGTCAAGGCTAAAATTCAAGCCAAGGAGGGTATTCCGCCGGATCAT 34625 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| || | | ||||| || ||| | | |||||||| Sbjct 34626 CAGCGATTGATTTTCGCCGGGAAGATGCTCGAGGACGGACGAACCCTAGCTGATTACAAT 34685 Query 22399 AT 22400 || Sbjct 34686 AT 34687 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 22215 AAAG-ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||||| ||||| || ||||| || || ||||| ||| | ||||| || || || | Sbjct 34942 AAAGTATGCAGATTTTCGTCAAAACCTTGACTGGTAAGACGATTACTCTCGAGGTCGAGA 35001 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | |||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct 35002 GCTTCGATACGATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCGCCTG 35061 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 || || | | || || |||| ||| | ||||| || ||| | | |||| Sbjct 35062 TTCGGCAGGGATTGATTTTCGCCGAGAAAGTACTCGAGGACGGACGAACCCTAGCTGATT 35121 Query 22394 ACAACATTCAAAAAGAATC 22412 |||| || || || ||||| Sbjct 35122 ACAATATACAGAAGGAATC 35140 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 ||||| ||| | ||| || || || | ||||||| | ||| || |||| || Sbjct 28517 GGTAAGACGATTTTTCTCGAGGTCGAGAGATCCGATACGATCGACAATGTCAAGTCTAAG 28576 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 ||||||||||||||||||||||| || ||||| || | | || || ||||| |||||| Sbjct 28577 ATTCAAGACAAGGAGGGTATTCCGCCGGATCATCAGCAATTGATTTTCGCCGGGAAACAG 28636 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATC 22412 | ||||| || || | | |||||||| || ||||| ||||| Sbjct 28637 CTCGAGGACGGACGAACACTAGCTGATTACAATATACAAAAGGAATC 28683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419332065331000