Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq34240 87.8 1e-12 >seq34240 Length=378565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 21921 ATTGCC--GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAAC 21978 |||||| || ||||| ||| | || | || |||||||| || ||||||||||||| Sbjct 153685 ATTGCCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC 153626 Query 21979 AACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATA 22038 | | |||||| || ||| |||| |||||||| || ||||||||||| || ||||| Sbjct 153625 AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC 153566 Query 22039 TGGTATT 22045 |||| || Sbjct 153565 TGGTTTT 153559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357786976399600