Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq34376 82.4 7e-11 >seq34376 Length=372974 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290 ||| | | ||| | |||||| |||| ||| | || || | || || ||||||||| Sbjct 263084 GGTATCATACCTGAAACATGGGCAATCATGCATGTCAATAATGAGTAAGATGCAATGTTA 263025 Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350 || || || || | |||||| ||| | || | ||||||| |||||||| |||||||| Sbjct 263024 AATGGCACCCCAAGACCCATATCTGCAGAGCGTTGATACATTTGACAGGATAGCTCACCA 262965 Query 20351 TCAGCTACATAAAATTGA 20368 | ||||||| |||| ||| Sbjct 262964 TTAGCTACAAAAAACTGA 262947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440945771816000