Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq34042 154 3e-32 seq31522 140 8e-28 seq33260 138 3e-27 seq34423 136 9e-27 seq33279 127 5e-24 seq33714 125 2e-23 seq33157 125 2e-23 seq34050 109 1e-18 seq33803 89.7 1e-12 seq34436 87.8 4e-12 >seq34042 Length=367129 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 85717 CCACCGCGGAGGCGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85776 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 85777 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 85836 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || ||||| || || || | || |||||| || Sbjct 85837 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCCGACGATTCAACC 85896 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| |||||||||||||| ||||| ||||| || || ||||||||| Sbjct 85897 TCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTCACAAAGATCTGCATT 85944 >seq31522 Length=43835 Score = 140 bits (154), Expect = 8e-28 Identities = 179/244 (73%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 288236 TTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATAT 288295 |||| | || ||||| || || | || || ||||| | || ||| || |||||| Sbjct 35412 TTCAGAAATCGCCACCACGAAGACGGAGAACAAGATGGAGAGTTGATTCCTTCTGGATAC 35353 Query 288296 TATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTT 288355 | || ||||| || ||||| || || || | ||||| ||||| || |||| ||||||| Sbjct 35352 TGTAATCGGCAAGAGTGCGCCCATCCTCAAGCTGTTTCCCTGCAAATATCAAGCGCTGTT 35293 Query 288356 GAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAAT 288412 || ||||| ||||||||||||||||| || ||||| |||||||| || || | || Sbjct 35292 GA---TCTGGAGGAATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTCTCAATTGTAT 35236 Query 288413 C---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 | ||| ||| ||||| || |||||||| ||||| |||||||| || || || || | Sbjct 35235 CTGAGCT---TTCAACTTCTAGGGTGATCGTTTTCCCAGTCAGAGTTTTCACAAAGATTT 35179 Query 288470 GCAT 288473 |||| Sbjct 35178 GCAT 35175 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 288269 GATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATT 288328 |||| | ||| ||| || | || || || ||||| || ||||| || || || | | Sbjct 29378 GATGGAGAGTGGATTCCTTAAGAATGTTGTAATCGGCAAGAGTGCGCCCATCCTCAAGCT 29319 Query 288329 GTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTT 288388 |||| ||||| || |||| |||||||| || || ||||| || || ||||||| Sbjct 29318 GTTTCCCTGCAAATATCAAGGGCTGTTGATTTGGAGGAATGCCTTCCTTGTCTTGGATTT 29259 Query 288389 TCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 |||| || || || || || | |||| ||| || || || || || || ||||||| Sbjct 29258 TCGCCTTGACATTATCAATTGTATCGGAGCTC---TCAACCTCCAGAGTAATTGTCTTCC 29202 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || | ||||| |||||||||||||| Sbjct 29201 CAGTTAATGTCTTCACGAATATCTGCAT 29174 >seq33260 Length=58559 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | ||| ||||| || | || || |||||||| || ||||| || Sbjct 33973 CCGCCGCGGAGGCGAAGGACGAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCA 34032 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| ||||| || | || ||||| |||||||| || ||||| || ||||| Sbjct 34033 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGG---TCTGGC 34089 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || |||||||| ||||| ||||| || || || | || || || Sbjct 34090 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGATGACTCC 34149 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||||||||| ||||| ||||| ||||| ||||||||| Sbjct 34150 ACCTCTAGGGTTATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATT 34200 >seq34423 Length=256361 Score = 136 bits (150), Expect = 9e-27 Identities = 160/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| ||| || ||||| || ||||||||||| || || ||||| Sbjct 118964 AGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCC 119023 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | |||||||| ||||||||||| | ||| || ||||||||||| || || Sbjct 119024 TCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCT 119083 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATC 288438 ||||| || || || ||||| || || | ||| ||| || || ||||| ||||| Sbjct 119084 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAACTC---TCCACCTCGAGGGTGATG 119140 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || |||||||| |||||||| Sbjct 119141 GTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 119175 Score = 127 bits (140), Expect = 5e-24 Identities = 170/234 (73%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| || || || | |||| ||| || || ||||| || || ||||| Sbjct 118492 TCCACCGCGGAGCCTGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGC 118551 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| || || ||||| || | ||||| || |||||||| || | ||| || |||| Sbjct 118552 GAGGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTG---ATCTGG 118608 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||||||||| || |||||||| || || || ||||| || || | || ||| Sbjct 118609 GGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATTGTGTCTGAGCT--- 118665 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| ||||| ||||| || || ||||| || || ||||| Sbjct 118666 TTCAACCTCCAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACAAAGATTTGCAT 118719 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| ||| || ||||| || || |||||||| ||||| ||||| Sbjct 118736 AGCACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCC 118795 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | |||||||| ||||||||||| | ||| || |||||||| || || ||| Sbjct 118796 TCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 118855 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 || || || ||||| ||||| || || | || |||| || || ||||| ||||| Sbjct 118856 TGAATCTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATG 118912 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || |||||||| || ||||| Sbjct 118913 GTCTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 118947 >seq33279 Length=59633 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || | ||||| || || || || || || || || || Sbjct 12003 CCACCCCTCAGCCTGAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 12062 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| |||||||| || | ||| ||| |||||| Sbjct 12063 AGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGA---TCTGGG 12119 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| ||||||||||| || |||||||| || || | ||| ||| Sbjct 12120 GGAATTCCTTCTTTGTCCTGGATTTTTGCCTTCACGTTATCAATTGTGTCGGAGCTTTCC 12179 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || |||||||| || |||||||| Sbjct 12180 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 12229 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| ||||| ||||| ||||| || || Sbjct 11775 CCACCACGGAGACGGAGAACAAGGTGCAGGGTGGACTCTTTCTGGATGTTATAATCAGCC 11834 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| || || ||||| || |||||||| | ||| ||| |||| Sbjct 11835 AGAGTCCTTCCATCTTCCAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGG 11894 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || || || |||||||| || || |||| || ||| ||| Sbjct 11895 ATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATTGTCAATAGTGTCAGAGCT---TTCC 11951 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 11952 ACCTCCAAAGTAATGGTCTTTCCAGTCAGGGTCTTCACAAATATCTGCAT 12001 Score = 105 bits (116), Expect = 2e-17 Identities = 143/197 (73%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||||||| || || |||||||| | || || || |||||| Sbjct 12951 TCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCGTCTTCGAGCTGCTTCCCGGCGAAG 13010 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | || || |||||| ||||| || || |||||||| || || || ||| Sbjct 13011 ATCAGCCTTTGCTG---GTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTAACG 13067 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || ||||| ||||| ||||| ||||| || || Sbjct 13068 TTGTCGATGGTGTCGGAACTC---TCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTT 13124 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 13125 TTCACAAAGATCTGCAT 13141 >seq33714 Length=161502 Score = 125 bits (138), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || ||||||||||||||||| || Sbjct 21651 CCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCA 21592 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || ||||| | || |||||||| || ||||| |||||||| |||| Sbjct 21591 AGTGTACGGCCATCTTCAAGCTGCTTTCCTGCAAAAATCAGCCGCTGTTG---ATCTGGA 21535 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || |||||||| ||||| ||||| || || || || || || || | ||| ||| Sbjct 21534 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTATCAATGGTATCAGAACTC--- 21478 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| || || |||||||| || || |||||||| Sbjct 21477 TCAACCTCGAGAGTAATAGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 21425 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| |||||||||||||| ||||| || Sbjct 21879 CCACCACGCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCTGCA 21820 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || |||||||| || || | || ||||| || || ||||| | |||||| |||| Sbjct 21819 AGAGTGCGTCCATCGTCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTG---ATCTGGA 21763 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || |||||||| ||||| || || || || || || || || || | ||| |||| Sbjct 21762 GGAATTCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTC--- 21706 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || ||||| || || || |||||||| Sbjct 21705 TCAACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 21653 Score = 116 bits (128), Expect = 9e-21 Identities = 171/238 (72%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| |||||||||||||| |||| Sbjct 22339 CATG-CCACCACGCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGT 22281 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || ||||| | || ||||| || || || || | |||||| || Sbjct 22280 CTGCTAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTCTGTTG---AT 22224 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| ||||| || || || || ||||| || || || | ||| || Sbjct 22223 CTGGGGGAATCCCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATGGTATCTGAGC 22164 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| || || || || ||||| || |||||||| Sbjct 22163 TC---TCAACCTCAAGAGTGATGGTCTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 22109 Score = 113 bits (124), Expect = 1e-19 Identities = 170/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| ||||||||||| || || | Sbjct 22858 CATG-CCACCACGCAGGCGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAAT 22800 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || ||||| | || ||||| || || ||||| | ||||| || Sbjct 22799 CAGCAAGTGTACGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGCCTTTGTTG---AT 22743 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 || || |||||||| ||||| || || || || ||||| || || || | ||| || Sbjct 22742 CTGGAGGAATTCCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATGGTATCCGAGC 22683 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||| ||||| || || ||||| || || || |||||||| Sbjct 22682 TC---TCAACTTCAAGAGTGATGGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 22628 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || |||||||| || ||||| || Sbjct 22107 CCACCACGCAGACGAAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCA 22048 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| || || || || | |||||| | || Sbjct 22047 AGAGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTCTGTTGGTCAGGAGGA 21988 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||||||||| || || || || || || || || || | ||| |||| || Sbjct 21987 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTC---TCA 21931 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || ||||| || || || |||||||| Sbjct 21930 ACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 21881 >seq33157 Length=145522 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || || || | || ||||| ||||| || ||||| || Sbjct 122128 CCACCGCGGAGACGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCCGCC 122069 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| || | || ||||| |||||||| || ||||| || |||| Sbjct 122068 AAGGTCCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCGGGTGGG 122009 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || || || |||||||| ||||| || || || | ||| || || || Sbjct 122008 ATTCCCTCCTTGTCTTGAATTTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCCACC 121949 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || || || ||||| |||||||| Sbjct 121948 TCCAGGGTTATCGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCAT 121902 >seq34050 Length=239353 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| || || |||||||| || || || || || || ||||| Sbjct 44579 AGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCCGCTAGGGTTCGGCCGTCC 44638 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTA 288378 || | || ||||| ||||| || || | ||| || ||||| |||||| || || Sbjct 44639 TCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGG---TCTGGCGGGATTCCCTCCTTG 44695 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || ||||||||||| || || | |||| ||| || || | || ||| Sbjct 44696 TCCTGGATCTTAGCTTTCACGTTGTCAATCGTATCGGAGCTTTCAACCTCCAAGGTAATC 44755 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || || ||||| |||||||| Sbjct 44756 GTCTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44790 Score = 100 bits (110), Expect = 7e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || || || | ||| || || ||||| ||||||||||| Sbjct 43880 CCCCCACGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTATAGTCGGCC 43939 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || ||||| || ||||||| | ||| ||| ||| Sbjct 43940 AGAGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGTGGA 43999 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| || |||||||| || || | ||| ||| || Sbjct 44000 ATCCCCTCCTTGTCTTGAATTTTAGCCTTCACGTTATCAATTGTGTCGGAGCTTTCCACC 44059 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| || || || ||||| || || ||||||||| Sbjct 44060 TCCAGGGTAATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATT 44107 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| || || |||||||| || |||||||| || || ||||| Sbjct 44807 AGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCC 44866 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||| || || ||||||||||| | ||| || ||||| || || ||||| Sbjct 44867 TCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTATCT 44926 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 || || || || || || || || || | || |||| || || ||||| || || Sbjct 44927 TGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTAATA 44983 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || || || || |||||||| Sbjct 44984 GTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 45018 >seq33803 Length=60497 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || || || || || ||||| | ||||||||||| || ||| Sbjct 11010 CCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTGTCGCTCGATTCGACGTCG 11069 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || || || || |||||||| |||||||| Sbjct 11070 AGCGTTATGGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 11113 >seq34436 Length=291992 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || || || || || || || || || | ||||||||||| || Sbjct 95049 ATACCTTCTTTGTCTTGAATCTTAGCCTTAACATTGTCGATTGTGTCGCTCGATTCAACC 95108 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| || || ||||| ||||| || ||||| ||||||||| || Sbjct 95109 TCGAGAGTGATGGTTTTTCCGGTTAGAGTTTTCACGAAAATCTGCATTTTG 95159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178484551477200