Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq33714 141 9e-29 seq31522 132 5e-26 seq33784 129 6e-25 seq33157 127 2e-24 seq33260 122 9e-23 seq33279 118 1e-21 seq34423 113 4e-20 seq34050 109 5e-19 seq34042 109 5e-19 >seq33714 Length=161502 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || || || ||||| |||||||| ||||| Sbjct 22108 ACCACCACGCAGACGAAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGC 22049 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | |||||||||||||| || ||| |||| |||| ||| ||||| ||||| Sbjct 22048 AAGAGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTCTGTTGGTCAGGAGG 21989 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||||| ||||| || || ||||||| || | ||||| | || || Sbjct 21988 AATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAAC 21929 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | ||||||||| || || ||||| Sbjct 21928 CTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 21881 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || |||||||| ||||||||||| || | || || | ||| Sbjct 22839 AGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAATCAGCAAGTGTACGACCATCT 22780 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| |||| |||| || || || |||||||||||||| || ||| Sbjct 22779 TCAAGCTGCTTTCCAGCAAAAATCAGCCTTTGTTGATCTGGAGGAATTCCTTCCTTATCT 22720 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || ||||| | ||| | |||| Sbjct 22719 TGAATCTTAGCCTTCACATTGTCAATGGTATCCGAGCTCTCAACTTCAAGAGTGATGGTC 22660 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | |||||| || || || ||||| Sbjct 22659 TTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 22628 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||| | || || |||||||| || ||||| ||||| Sbjct 21880 ACCACCACGCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCTGC 21821 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || ||||||||||| || ||| |||| || | ||| || || ||||| Sbjct 21820 AAGAGTGCGTCCATCGTCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGG 21761 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || ||||||| || | ||||| | || || Sbjct 21760 AATTCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAAC 21701 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | ||||||||| || || ||||| Sbjct 21700 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 21653 Score = 116 bits (128), Expect = 4e-21 Identities = 173/244 (71%), Gaps = 1/244 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || || || ||||| || || || ||||| Sbjct 21652 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGC 21593 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | |||||||||||||| || ||| |||| |||||||| || || ||||| Sbjct 21592 AAGTGTACGGCCATCTTCAAGCTGCTTTCCTGCAAAAATCAGCCGCTGTTGATCTGGAGG 21533 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || ||| ||| ||| || | |||||| || || Sbjct 21532 AATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTATCAATGGTATCAGAACTCTCAAC 21473 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAATAATGA 64454 || | ||| | ||||| || || | ||| ||||| || || ||||| | |||||| | Sbjct 21472 CTCGAGAGTAATAGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTGCAATAATTA 21413 Query 64455 TACA 64458 ||| Sbjct 21412 AACA 21409 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || |||||||| || ||||| ||||| | || || | ||| Sbjct 22320 AGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCTGCTAGAGTACGGCCATCT 22261 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| |||| |||| ||| || || || ||||| ||||| || ||| Sbjct 22260 TCAAGCTGCTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATCCCTTCCTTATCT 22201 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || | ||| | |||| Sbjct 22200 TGAATCTTAGCCTTCACATTGTCAATGGTATCTGAGCTCTCAACCTCAAGAGTGATGGTC 22141 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||||| || || || ||||| Sbjct 22140 TTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 22109 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||| ||||| | ||| | ||| || || || ||||||||||| ||||| Sbjct 23083 ACCCCCCCTCAATCGCAGCACCAAATGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGC 23024 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | | || || ||||| || || ||| | || | ||||| ||||| ||||| Sbjct 23023 AAGTGTCCTCCCATCATCCAGCTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGAGG 22964 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| ||| || | ||||| || || Sbjct 22963 AATGCCTTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCTGAACTCTCAAC 22904 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | ||||| || || || ||||| Sbjct 22903 CTCCAGGGTGATGGTCTTCCCAGTTAGCGTTTTGACAAAGATCTGCAT 22856 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || || || || || || ||||| ||||| | ||||| | || Sbjct 23296 AAGAACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCTGCAAGTGTGCGTCCATC 23237 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||| ||| | || |||| |||||| || || ||||| ||||| || || Sbjct 23236 CTCAAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTC 23177 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | ||||| ||||| || | ||| | ||| Sbjct 23176 CTGAATCTTAGCCTTCACATTATCAATAGTATCTGAACTCTCCACCTCCAGAGTGATGGT 23117 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | || || || || || ||||| Sbjct 23116 CTTCCCTGTAAGGGTCTTGACAAAGATCTGCAT 23084 >seq31522 Length=43835 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| || || || ||||| | |||||||||||| || || |||||||| || Sbjct 29173 ACCACCGCGCAACCTCAGAACCAGATGCAGCGTCGATTCTTTCTGGATATTGTAATCGGC 29114 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || ||||| || || || |||| | || |||||| || ||||| Sbjct 29113 TAGGGTTCGGCCATCCTCGAGCTGTTTACCCGCGAAAATCAACCTCTGCTGATCTGGAGG 29054 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||| | || || ||||| ||| || || | |||||| | || || Sbjct 29053 AATTCCTTCTCTGTCCTGAATTTTCGCCTTCACGTTATCAATTGTATCTGAGCTTTCAAC 28994 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || || |||| |||||| || || |||||||| Sbjct 28993 TTCTAGGGTGATCGTTTTCCCAGTCAGAGTTTTCACAAAGATTTGCAT 28946 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || || ||||||| || | |||||| | || Sbjct 35386 AGAACAAGATGGAGAGTTGATTCCTTCTGGATACTGTAATCGGCAAGAGTGCGCCCATCC 35327 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| || || ||| | || | ||||| || || ||||||||||||||||| || Sbjct 35326 TCAAGCTGTTTCCCTGCAAATATCAAGCGCTGTTGATCTGGAGGAATTCCTTCTTTATCC 35267 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | |||||| | || ||||||| || | || Sbjct 35266 TGAATCTTCGCCTTCACGTTCTCAATTGTATCTGAGCTTTCAACTTCTAGGGTGATCGTT 35207 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||| |||||| || || |||||||| Sbjct 35206 TTCCCAGTCAGAGTTTTCACAAAGATTTGCAT 35175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 64239 GATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCT 64298 |||| | || ||||| || ||||||||||||| || | |||||| | || ||||||| Sbjct 29378 GATGGAGAGTGGATTCCTTAAGAATGTTGTAATCGGCAAGAGTGCGCCCATCCTCAAGCT 29319 Query 64299 GCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTT 64358 | || || ||| | || | |||| || | |||||||| ||||| || ||||| |||| Sbjct 29318 GTTTCCCTGCAAATATCAAGGGCTGTTGATTTGGAGGAATGCCTTCCTTGTCTTGGATTT 29259 Query 64359 TTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGG 64418 | ||| ||| || | |||||| | || || || | ||| | ||||| || | Sbjct 29258 TCGCCTTGACATTATCAATTGTATCGGAGCTCTCAACCTCCAGAGTAATTGTCTTCCCAG 29199 Query 64419 TCAAAGTTTTTACGAAAATTTGCAT 64443 | || || || ||||| || ||||| Sbjct 29198 TTAATGTCTTCACGAATATCTGCAT 29174 >seq33784 Length=161669 Score = 129 bits (142), Expect = 6e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||||| ||| | || || || |||||||||||||| ||||| | || | | | || Sbjct 105412 AGCACTAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTCCCATCA 105353 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| |||| || ||||||||||| |||||||| ||||| || || Sbjct 105352 TCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC 105293 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | |||||||| ||| || | |||||| | |||||||| | || | ||| Sbjct 105292 TG-AATCTTTGCTTTAACATTGTCAATTGTATCTGAGCTCTCCACTTCCAATGTGATGGT 105234 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || || || || || || || ||||| Sbjct 105233 CTTCCCAGTTAAGGTCTTGACAAAGATCTGCAT 105201 Score = 122 bits (134), Expect = 9e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| || || || || || ||||| || ||||| | ||||||| | || Sbjct 105869 AAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGCCCATC 105810 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||| ||||| || ||| |||| || ||||||||||| |||||||| ||||| || || Sbjct 105809 CTCAAGTTGCTTACCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGAATACCTTCCTTGTC 105750 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || | | |||||||| ||| || | |||||| | |||||||| | || | | Sbjct 105749 CTG-AATCTTTGCTTTAACATTGTCAATTGTATCTGAGCTCTCCACTTCCAATGTGATTG 105691 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || || || || || || || || ||||| Sbjct 105690 TCTTCCCTGTTAAGGTCTTGACAAAGATCTGCAT 105657 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || || || |||||||||||||| ||||| | || | | | || Sbjct 105640 AGCACCAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTCCCATCC 105581 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| |||| || |||||||| || || ||||| ||||| || || Sbjct 105580 TCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 105521 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | |||||||| ||| || | |||||| ||||| || | ||| | ||| Sbjct 105520 TG-AATCTTTGCTTTAACATTATCAATAGTATCAGAACTCTCCACCTCAAGAGTGATGGT 105462 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || ||||| || || || || || ||||| Sbjct 105461 CTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 105429 Score = 114 bits (126), Expect = 1e-20 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||||| ||| | || || || || ||||| ||||| ||||| | || | | || Sbjct 104639 AGCACTAAATGGAGTGTTGACTCCTTCTGAATATTGTAGTCTGCAAGTGTCCTACCATCC 104580 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||||||| | || |||| ||||||||| || ||||| ||||| || ||| Sbjct 104579 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCT 104520 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | |||||||| || || | ||| || | |||||||| | || | ||| Sbjct 104519 TGGA-TCTTTGCTTTAACGTTGTCAATTGTGTCTGAGCTCTCCACTTCCAATGTGATGGT 104461 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGATACACTT 64461 ||| || || | || ||||| || || ||||| | |||| ||||| || Sbjct 104460 CTTCCCTGTGAGTGTCTTTACAAAGATCTGCATCT--GTAATTATACATTT 104412 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || || || | || ||||| ||||||||||| ||||| || Sbjct 104882 CCACCACGCAGACGAAGGACAAGGTGGAGTGTTGATTCCTTTTGAATGTTATAATCAGCA 104823 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| ||| |||| ||||||||||| || ||| | || || | || || || |||||| Sbjct 104822 AGGGTACGCCCGTCATCAAGCTGCTTACCAGCAAAGATCAGTCTTTGTTGATCTGGAGGA 104763 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || | | || ||||| ||| || | ||||| | || || Sbjct 104762 ATACCTTCCTTATCCTG-AATCTTAGCTTTCACATTGTCAATAGTATCTGAGCTCTCTAC 104704 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||| | |||||| || || || || || || || || ||||| Sbjct 104703 TTCTAAAGTGATGGTCTTCCCTGTTAAGGTCTTGACAAAGATCTGCAT 104656 >seq33157 Length=145522 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | |||||| || || | || || ||||| || |||||||| || || Sbjct 122128 CCACCGCGGAGACGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCCGCC 122069 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || |||||||| ||||| | |||||||||||||||||||| || Sbjct 122068 AAGGTCCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCGGGTGGG 122009 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||| || || ||||| ||||| ||| ||| || | || || || ||||| Sbjct 122008 ATTCCCTCCTTGTCTTGAATTTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCCACC 121949 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | |||| ||||| || || | ||||| ||||| || ||||| || Sbjct 121948 TCCAGGGTTATCGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATCTT 121899 >seq33260 Length=58559 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | ||| || || || | || || || ||||| |||||||| ||||| Sbjct 33973 CCGCCGCGGAGGCGAAGGACGAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCA 34032 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| |||| || |||||||| ||||| | ||||| ||||||||||| || || Sbjct 34033 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGG 34092 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | || || | ||||| Sbjct 34093 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGATGACTCCACC 34152 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||| |||| ||||| || |||| || || ||||| || |||||||| Sbjct 34153 TCTAGGGTTATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATTTT 34202 >seq33279 Length=59633 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | || || ||||| | ||||| || || || || |||||||||||||| || Sbjct 12002 ACCACCCCTCAGCCTGAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGC 12061 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || |||||||| || || | || |||| |||||| || || || Sbjct 12062 AAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCTGGGGG 12121 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||||| || || |||||| ||| || || | ||| || | ||||| Sbjct 12122 AATTCCTTCTTTGTCCTGGATTTTTGCCTTCACGTTATCAATTGTGTCGGAGCTTTCCAC 12181 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || || || || ||||| Sbjct 12182 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 12229 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || ||||||||||| || | ||| || | || ||||||||||| ||| Sbjct 12489 GTGGATTCCTTCTGGATGTTGTAATCGGCCAGGGTACGGCCATCCTCAAGCTGCTTTCCG 12548 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || ||||||||| || |||||||| || || || || || || ||| Sbjct 12549 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTA 12608 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | || || || | ||||| |||||| ||||| | ||| Sbjct 12609 ACGTTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTTATGGTCTTTCCGGTGAGGGTT 12668 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 12669 TTCACGAAGATCTGCAT 12685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| |||| ||| || ||||||| |||||||| ||| Sbjct 12945 GTTGACTCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCGTCTTCGAGCTGCTTCCCG 13004 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || |||| |||||||| || |||||||| || || || || || || ||| Sbjct 13005 GCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTA 13064 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || || | ||| | |||||||||||| | ||| Sbjct 13065 ACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTT 13124 Query 64427 TTTACGAAAATTTGCATTTTAATAA 64451 || || || || ||||| | |||| Sbjct 13125 TTCACAAAGATCTGCATCTGTATAA 13149 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||||||||| | ||| || | || ||||||||||| ||| Sbjct 12261 GTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTACGGCCATCCTCAAGCTGCTTTCCG 12320 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || |||||||| || || ||||| || || || || || || ||| Sbjct 12321 GCAAAGATCAACCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 12380 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | || || || | || | |||||||| || | ||| Sbjct 12381 ACGTTGTCAATGGTGTCAGAGCTCTCAACCTCCAGGGTGATTGTCTTGCCCGTGAGGGTT 12440 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 12441 TTCACGAAGATCTGCAT 12457 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || || |||||||| || | ||| || | || ||||||||||| ||| Sbjct 12717 GTTGACTCCTTCTGGATATTGTAATCGGCCAGGGTACGGCCATCCTCAAGCTGCTTACCG 12776 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || ||||||||| || |||||||| || || || || || || ||| Sbjct 12777 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 12836 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | ||| | ||||| ||||| | ||| Sbjct 12837 ACGTTGTCAATGGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTTCCGGTGAGGGTT 12896 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 12897 TTGACGAAGATCTGCAT 12913 >seq34423 Length=256361 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | || ||||| | |||| || || || || || ||||||||||| ||| Sbjct 118493 CCACCGCGGAGCCTGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGCG 118552 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || ||||| |||||||| | || |||| |||||| || || || Sbjct 118553 AGGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGG 118612 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || || || ||| || || | ||| || | || || Sbjct 118613 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATTGTGTCTGAGCTTTCAACC 118672 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | ||||| || || |||||||| Sbjct 118673 TCCAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACAAAGATTTGCAT 118719 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || ||||| || || ||||||||||| |||| |||||| |||| Sbjct 118736 AGCACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCC 118795 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| || ||||| | || |||| ||||||||| || || ||||| || || || Sbjct 118796 TCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 118855 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| || || | || || | ||||| || | || | ||| Sbjct 118856 TG-AATCTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGT 118914 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | ||||| ||||| |||||||| Sbjct 118915 CTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 118947 >seq34050 Length=239353 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| | ||||| || ||||| || ||||| ||||| || || | ||| || || Sbjct 44348 CTCAGCACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAGGGTTCGGCCG 44407 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || ||||||||||| ||||| | || |||| ||||||||| || || ||||| || || Sbjct 44408 TCCTCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTG 44467 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| || || ||| || || | || ||| | || || || | || | Sbjct 44468 TCTTGGATCTTAGCCTTCACGTTGTCTATGGTGTCAGAGCTTTCAACCTCCAAGGTAATA 44527 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||||| | ||||| ||||| || ||||| Sbjct 44528 GTCTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44562 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||||| || || | ||||| || || || || || || |||||||| || Sbjct 44564 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCCGCT 44623 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| ||||||||||| ||||| ||||||||| ||||||||| || || Sbjct 44624 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGGTCTGGCGGG 44683 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || | | || ||||| || || | ||||| | || || Sbjct 44684 ATTCCCTCCTTGTCCTGGA-TCTTAGCTTTCACGTTGTCAATCGTATCGGAGCTTTCAAC 44742 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||| | ||||| ||||| || ||||| Sbjct 44743 CTCCAAGGTAATCGTCTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44790 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| | |||| || || || || ||||||||||| || || | || || | Sbjct 44120 CTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGAGTACGGCCA 44179 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || |||||||||||||| ||| | ||||||| ||| ||||| ||||| || ||||| || Sbjct 44180 TCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCAGGAGGGATGCCTTCCTTG 44239 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||| || || | ||||| | ||||| || | || | | Sbjct 44240 TCCTGGATCTTCGCCTTCACGTTGTCAATAGTATCGGAGCTTTCCACCTCCAGGGTGATG 44299 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || ||||| | ||| || |||||||| |||||| Sbjct 44300 GTTTTCCCGGTGAGAGTCTTCACGAAAATCTGCATT 44335 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||||| || || | ||||| || || || || || || |||||||| ||| Sbjct 44792 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCG 44851 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || || ||||| ||||| | || |||| ||||||||| || || Sbjct 44852 AGGGTACGACCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 44911 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||| ||| || | || || | || || Sbjct 44912 ATGCCCTCCTTATCTTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACC 44971 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||||||||| | ||||| || || || ||||| Sbjct 44972 TCGAGAGTAATAGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 45018 >seq34042 Length=367129 Score = 109 bits (120), Expect = 5e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || || | || || || || || |||||||| || || Sbjct 85716 ACCACCGCGGAGGCGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 85775 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | ||||||||||||||||| || || Sbjct 85776 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 85835 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || ||||| || || || || ||| ||| ||| || | || | ||| || || Sbjct 85836 GATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGT--CCGACGATTCA 85893 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | || | ||||| || |||| || || || || || |||||||| Sbjct 85894 ACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 85946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499161393656000