Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq34317 87.8 2e-12 >seq34317 Length=297777 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 170391 AGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAG 170450 || |||||| || |||||| | | ||||||||||||||||| || ||||| |||| Sbjct 200225 AGAACATGGTTATTTTGGTCAATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 200284 Query 170451 TCTTCACTTCTTCCTTGCTACATTCCCTGTA-----GTATGCATCTGGTTAACTTCAATG 170505 | ||||||||| | | | | | |||||| ||| | |||||||| || | | Sbjct 200285 GTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGGTAGGTATCTGGTTCAC-GCTTTA 200343 Query 170506 GGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTC 170555 ||||| ||| |||||||| ||||| || || || || |||||||| || Sbjct 200344 GGTATCAGCATTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATC 200393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582284094560000