Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq30018 105 8e-18 >seq30018 Length=17342 Score = 105 bits (116), Expect = 8e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 84354 GAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGA 84413 ||||||||||| ||| | ||||||| ||| ||||||||||||| || || ||||| ||| Sbjct 7305 GAACCATGCATAGCACATAATAGAGAGCCATCGAATACACCAGCTACACCTAACATATGA 7246 Query 84414 AAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTC 84471 || || ||| |||| |||| || || |||||| | |||| |||| | ||||| |||| Sbjct 7245 AATGGGTGCGTAAGAGTGTTGTGCTCGGCCTGGGATACAATCATGAAATTGAAAGTTC 7188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570720892792000