Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq33784 102 1e-16 >seq33784 Length=161669 Score = 102 bits (112), Expect = 1e-16 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| || || | || || |||||||| || || || ||| | || ||||| | | | Sbjct 104657 TGCAGATCTTTGTCAAGACCTTAACAGGGAAGACCATCACTTTAGAAGTAGAGAGCTCA- 104715 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| ||| ||| || || ||| ||||| ||||| || |||||| Sbjct 104716 GATACTATTGACAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCTCCAGATCAA 104775 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||||| || ||||| ||||| || | ||||| | || | | |||||||| Sbjct 104776 CAAAGACTGATCTTTGCTGGTAAGCAGCTTGATGACGGGCGTACCCTTGCTGATTATAAC 104835 Query 146211 ATACAAAAAGAATCGACTATCCA 146233 || ||||| ||||| || |||| Sbjct 104836 ATTCAAAAGGAATCAACACTCCA 104858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785405784008000