Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq33784 170 1e-37 seq34050 152 4e-32 seq33279 134 1e-26 seq33714 131 1e-25 seq31522 111 1e-19 seq34423 102 6e-17 seq34240 87.8 1e-12 seq34042 87.8 1e-12 >seq33784 Length=161669 Score = 170 bits (188), Expect = 1e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| ||||||||||||||| || || || || ||||||||||| || || ||| Sbjct 105655 CCTCCCCTCAGACGCAGCACCAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCA 105596 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| ||||| || ||||||||| | |||| || |||||||| || ||| Sbjct 105595 AGTGTCCTCCCATCCTCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGGGGGA 105536 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| |||| ||| ||| | || | ||| |||||| || || Sbjct 105535 ATGCCTTCCTTGTCCTG-AATCTTTGCTTTAACATTATCAATAGTATCAGAACTCTCCAC 105477 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || || ||||| ||||| || ||||| |||||||| Sbjct 105476 CTCAAGAGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 105429 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||||| ||||| || || || || ||||||||||| || || ||| Sbjct 105427 CCTCCCCTCAGTCGCAGCACTAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCA 105368 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||||||||| || ||||||||| | |||| || ||||| || || ||| Sbjct 105367 AGTGTCCTCCCATCATCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGA 105308 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| |||| ||| ||| | || | || || || || || Sbjct 105307 ATGCCTTCCTTGTCCTG-AATCTTTGCTTTAACATTGTCAATTGTATCTGAGCTCTCCAC 105249 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || || || ||||||||||| || ||||| |||||||| Sbjct 105248 TTCCAATGTGATGGTCTTCCCAGTTAAGGTCTTGACAAAGATCTGCAT 105201 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || || | || || || ||||| ||||||||||||||||| ||| Sbjct 104882 CCACCACGCAGACGAAGGACAAGGTGGAGTGTTGATTCCTTTTGAATGTTATAATCAGCA 104823 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||||| || || || |||||| | |||| |||||| ||||| || ||| Sbjct 104822 AGGGTACGCCCGTCATCAAGCTGCTTACCAGCAAAGATCAGTCTTTGTTGATCTGGAGGA 104763 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || || || ||| || | ||| ||| | || | ||| || || ||||| Sbjct 104762 ATACCTTCCTTATCCTG-AATCTTAGCTTTCACATTGTCAATAGTATCTGAGCTCTCTAC 104704 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || |||||||| || ||||| |||||||| Sbjct 104703 TTCTAAAGTGATGGTCTTCCCTGTTAAGGTCTTGACAAAGATCTGCAT 104656 >seq34050 Length=239353 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| || || ||||||||||| ||||| || || || || || ||||| || Sbjct 44792 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCG 44851 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || |||||||| || || || | |||| || ||||| |||||||| Sbjct 44852 AGGGTACGACCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 44911 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| || ||||| ||| || | |||||| | || | ||||| || || || Sbjct 44912 ATGCCCTCCTTATCTTG-AATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGAC 44970 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| ||||| |||| |||||| ||||| |||||||| Sbjct 44971 CTCGAGAGTAATAGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 45018 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || || || |||||||| || || | || | Sbjct 43891 ACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTATAGTCGGCCAGAGTCCTTCC 43950 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | ||||| || ||||||||||| ||||| ||||| || Sbjct 43951 ATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCCTT 44010 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | || || | || | ||||| || ||| || || || || | Sbjct 44011 GTCTTG-AATTTTAGCCTTCACGTTATCAATTGTGTCGGAGCTTTCCACCTCCAGGGTAA 44069 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| ||||| || | ||| || ||||| ||||||||| Sbjct 44070 TAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATT 44107 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 ||||||||||||||| |||||||| || ||||| || || || || | ||| || || Sbjct 44350 CAGCACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAGGGTTCGGCCGTC 44409 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || || || || | || | || ||||| || || || || ||||| ||||| Sbjct 44410 CTCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTC 44469 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | || || || | |||| |||||||| ||| || || | || ||||| Sbjct 44470 TTGGATCTTAGCCTTCACGTTGTCTATGGTGTCAGAGCTTTCAACCTCCAAGGTAATAGT 44529 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| |||| ||||||||| || |||||||| Sbjct 44530 CTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44562 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| || || ||||||||||| ||||| || || || || || |||||||| Sbjct 44564 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCCGCT 44623 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || || || || || || || | || | || ||||| || ||||| Sbjct 44624 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGGTCTGGCGGG 44683 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||| || | || | || || || ||| || Sbjct 44684 ATTCCCTCCTTGTCCTGGATCTTAGCTTTCACGTTGTCAATCGTATCGGAGCTTTCAACC 44743 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || ||||| |||| ||||||||| || |||||||| Sbjct 44744 TCCAAGGTAATCGTCTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44790 >seq33279 Length=59633 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||||||| |||||||| || || |||||||| || || ||||| ||||| || Sbjct 12231 CCTCCCCTCAAACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGCC 12290 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || || || ||| | ||||| |||||||| || || || Sbjct 12291 AGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCTGGGGGG 12350 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||| | || | |||||||| || || Sbjct 12351 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACC 12410 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | |||||| || || |||||||| Sbjct 12411 TCCAGGGTGATTGTCTTGCCCGTGAGGGTTTTCACGAAGATCTGCAT 12457 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| | |||||||||||||| || || || || |||||||| ||||| ||| Sbjct 12003 CCACCCCTCAGCCTGAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 12062 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || ||||| | || | || |||||||| || ||| Sbjct 12063 AGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCTGGGGGA 12122 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||| || | |||| || || | || | ||||| || ||| || Sbjct 12123 ATTCCTTCTTTGTCCTGGATTTTTGCCTTCACGTTATCAATTGTGTCGGAGCTTTCCACC 12182 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || ||||| |||||||| Sbjct 12183 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 12229 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||||||| |||||||| || || |||||||| || || ||||| ||||| || Sbjct 12459 CCACCCCTCAAACGGAGCACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGCC 12518 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || || || ||| | ||||| || ||||| || || ||| Sbjct 12519 AGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 12578 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || || || | || | |||||||| || || Sbjct 12579 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAGCTCTCAACC 12638 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || || | |||||| || || |||||||| Sbjct 12639 TCGAGAGTTATGGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCAT 12685 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| ||||| || ||||||||||| || | || | Sbjct 11786 ACGGAGAACAAGGTGCAGGGTGGACTCTTTCTGGATGTTATAATCAGCCAGAGTCCTTCC 11845 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || |||||| | |||| || |||||||| || || || ||||| || Sbjct 11846 ATCTTCCAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGGATGCCCTCCTT 11905 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||| ||| | || | ||||||||| ||| || || | ||| | Sbjct 11906 GTCTTG-AATCTTGGCTTTCACATTGTCAATAGTGTCAGAGCTTTCCACCTCCAAAGTAA 11964 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||| || |||||||||||||| Sbjct 11965 TGGTCTTTCCAGTCAGGGTCTTCACAAATATCTGCAT 12001 >seq33714 Length=161502 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| |||||||||||||| ||||| || || || |||||||| || || ||| Sbjct 23082 CCCCCCCTCAATCGCAGCACCAAATGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGCA 23023 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | |||||| || ||||| || ||| | ||||| | || || || || ||| Sbjct 23022 AGTGTCCTCCCATCATCCAGCTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGAGGA 22963 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| || ||| | || | || || ||| || || Sbjct 22962 ATGCCTTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCTGAACTCTCAACC 22903 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||||| ||||| ||||| |||||||| Sbjct 22902 TCCAGGGTGATGGTCTTCCCAGTTAGCGTTTTGACAAAGATCTGCAT 22856 Score = 125 bits (138), Expect = 5e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || ||||| |||||||| ||||| ||||| |||| || ||| | Sbjct 22842 CGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAATCAGCAAGTGTACGACCA 22783 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | |||| ||||| ||||| || ||||| || || || Sbjct 22782 TCTTCAAGCTGCTTTCCAGCAAAAATCAGCCTTTGTTGATCTGGAGGAATTCCTTCCTTA 22723 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | || ||| | || | || || || || ||||||||||| || Sbjct 22722 TCTTG-AATCTTAGCCTTCACATTGTCAATGGTATCCGAGCTCTCAACTTCAAGAGTGAT 22664 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||||| ||||| |||||||| Sbjct 22663 GGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 22628 >seq31522 Length=43835 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||| || ||||||| ||||| |||| ||||| ||| || || || Sbjct 29377 ATGGAGAGTGGATTCCTTAAGAATGTTGTAATCGGCAAGAGTGCGCCCATCCTCAAGCTG 29318 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| || ||| ||||||| || |||| || ||||| || || |||||||| | ||| Sbjct 29317 TTTCCCTGCAAATATCAAGGGCTGTTGATTTGGAGGAATGCCTTCCTTGTCTTGGATTTT 29258 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 |||||| | || | || || || || || || ||||| || || || ||||| Sbjct 29257 CGCCTTGACATTATCAATTGTATCGGAGCTCTCAACCTCCAGAGTAATTGTCTTCCCAGT 29198 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||||||||| Sbjct 29197 TAATGTCTTCACGAATATCTGCAT 29174 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || || || || || || || ||||| || | ||| || || ||||| ||| Sbjct 28920 TGGAGAGTAGACTCCTTCTGTATATTGTAATCAGCTAGGGTACGTCCGTCCTCGAGCTGT 28861 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || | || | ||||||| ||||||||||||||||||||||| |||||||| ||| || Sbjct 28860 TTCCGGGCGAAAATCAATCGCTGCTGATCCGGCGGAATACCCTCCTTGTCTTG-AATCTT 28802 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | |||||| | || | || || || | || || |||| || || || | ||| Sbjct 28801 AGCCTTGACATTGTCGATCGTATCGGATCTCTTGACCTCCAGAGAAATCGTCTTACGAGT 28742 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || |||||||| Sbjct 28741 GAAGGTTTTGACGAAGATCTGCAT 28718 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 29593 GATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCA 29652 ||||| || || || || ||||| || | ||| || || |||||| ||| | || Sbjct 35140 GATTCCTTCTGTATATTGTAATCAGCTAGGGTTCGTCCGTCCTCGAGTACTTTCTCGGCG 35081 Query 29653 TATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGAC 29711 | ||||||| ||| || | |||||||||||||| |||||||| ||| || | ||||| Sbjct 35080 AAAATCAATCCCTGCCGAACAGGCGGAATACCCTCCTTGTCTTG-AATCTTAGCCTTGAC 35022 Query 29712 AGTTTCTACAGTGTCAGAAAGT-TCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTT 29770 | | || | || || ||| | || || || ||||| || || || ||||| ||||||| Sbjct 35021 ATTGTCGATCGTATC-GAAGCTCTCGACCTCGAGAGTAATCGTCTTACCAGTCAAGGTTT 34963 Query 29771 TAACAAATATCTGCAT 29786 | || || |||||||| Sbjct 34962 TGACGAAAATCTGCAT 34947 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| | ||||| | | || || ||||| || | ||| || || ||||| Sbjct 34708 TGAAGTCTTGATTCCGTCTTTATATTGTAATCAGCTAGGGTTCGTCCGTCCTCGAGCATC 34649 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || || | ||||||| || |||||||||||||||||||| ||| |||| |||||| Sbjct 34648 TTCCCGGCGAAAATCAATCGCTGATGATCCGGCGGAATACCCTCCTTGGCTTG-AATTTT 34590 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | |||||| | | | || || || ||| || || |||| || || || || || Sbjct 34589 AGCCTTGACATTGCCGATCGTATCGGATTTTTCGACCTCGAGAGAAATTGTCTTACCGGT 34530 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || || ||||| Sbjct 34529 AAAGGTTTTGACGAAGATATGCAT 34506 >seq34423 Length=256361 Score = 102 bits (112), Expect = 6e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || || || || || || ||||||||||| |||| || | Sbjct 118276 ACGAAGGACAAGGTGCAGGGTAGACTCCTTCTGGATGTTATAATCAGCAAGAGTCCTTCC 118335 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || || ||| | ||||| || ||||| || || || || ||||| || Sbjct 118336 ATCTTCCAATTGCTTCCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTT 118395 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| | |||| ||||| || || || |||||||| | Sbjct 118396 GTCCTG-AATCTTGGCCTTAACATTGTCTATGGTGTCCGAGCTCTCAACCTCAAGAGTGA 118454 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| ||||| | ||| || || || ||||||||| Sbjct 118455 TGGTTTTTCCAGTGAGGGTCTTCACGAAAATCTGCATT 118492 >seq34240 Length=378565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||| | | || |||| ||||| || ||||| || || ||||| ||||| || Sbjct 153543 TCCTCCCCTAAGTCTCAAAACCAGGTGAAGTGTTGATTCCTTCTGGATGTTGTAATCAGC 153602 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | |||||||||||| | |||| ||| |||||||| || || Sbjct 153603 CAGAGTCCTTCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGGGG 153662 Query 29679 AATACCCTCTTTGTCTTG 29696 ||||| |||||||| || Sbjct 153663 GATACCTTCTTTGTCCTG 153680 >seq34042 Length=367129 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || ||||| || || || ||||| || || || | |||||| || ||||| || Sbjct 85741 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 85800 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||| || | || | | ||||| |||||||| || || || ||||| || | ||| Sbjct 85801 TTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTT 85860 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| | || | ||||| || ||| || || || || || || || || || Sbjct 85861 GCCTTCACATTGTCGATGGTGTCCGACGATTCAACCTCGAGGGTGATCGTCTTCCCCGTC 85920 Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789 | ||| || ||||| ||||||||||| Sbjct 85921 AGGGTCTTCACAAAGATCTGCATTTT 85946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384855817913400