Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq34240 89.7 4e-13 >seq34240 Length=378565 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 106347 ATTGCC--GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAAC 106404 |||||| ||||||||||| | ||| |||||| || || || |||| ||| ||||||| Sbjct 153685 ATTGCCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC 153626 Query 106405 AATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATT 106464 | || |||||| | ||| ||| ||||||||||| || || ||||| ||||| || Sbjct 153625 AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC 153566 Query 106465 TAGTATTGAGGTTACGAGGAGGA 106487 | || ||||| | | |||||| Sbjct 153565 TGGTTTTGAGACTTAGGGGAGGA 153543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401950077459200