Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq33714 150 1e-31 seq33784 140 2e-28 seq33279 127 1e-24 seq34423 120 2e-22 seq34050 120 2e-22 seq31522 116 2e-21 seq33260 104 1e-17 seq33157 102 5e-17 seq34042 86.0 4e-12 >seq33714 Length=161502 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 |||| |||||||||||| || |||||| |||||||| || |||| |||||| | | | Sbjct 23070 CGCAGCACCAAATGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGCAAGTGTCCTCCCA 23011 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || || |||||||| ||||| || |||||||||||||| || || | || |||||| Sbjct 23010 TCATCCAGCTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGAGGAATGCCTTCCTTG 22951 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 ||| |||| |||| || || | ||| || ||| ||||| || |||| ||| || Sbjct 22950 TCTTGGATC-TTTGCCTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAGGGTGAT 22892 Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || |||| |||||| ||||| ||||||||| Sbjct 22891 GGTCTTCCCAGTTAGCGTTTTGACAAAGATCTGCATG 22855 Score = 95.1 bits (104), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||| ||| ||| ||||| ||||| ||||| | |||||| || | |||||||| || Sbjct 22831 ATGGAGGGTGGACTCTTTTTGGATGTTGTAATCAGCAAGTGTACGACCATCTTCAAGCTG 22772 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || ||||| || | | ||||| || || || | ||| ||||| ||| ||||| Sbjct 22771 CTTTCCAGCAAAAATCAGCCTTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTT 22712 Query 34623 TTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || || | ||| || || |||||| ||||| | || || || || || | Sbjct 22711 A-GCCTTCACATTGTCAATGGTATCCGAGCTCTCAACTTCAAGAGTGATGGTCTTGCCAG 22653 Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707 | | ||||||||||| ||||||||| Sbjct 22652 TAAGAGTTTTCACAAAGATCTGCATG 22627 >seq33784 Length=161669 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || |||| ||| |||||||| || ||||||||||||||| || |||| | Sbjct 105427 CCTCCCCTCAGTCGCAGCACTAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCA 105368 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | | || || || || || || ||||| || | ||||| ||||| || || Sbjct 105367 AGTGTCCTCCCATCATCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGA 105308 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||||| | |||||| | |||||| ||| ||||||||| Sbjct 105307 ATGCCTTCCTTGTCCTGAATCTTT-GCTTTAACATTGTCAATTGTATCTGAGCTCTCCAC 105249 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || || || || ||||| || || ||||| ||||||||| Sbjct 105248 TTCCAATGTGATGGTCTTCCCAGTTAAGGTCTTGACAAAGATCTGCATG 105200 Score = 138 bits (152), Expect = 7e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||| | || || ||| |||||| || |||||||| |||| | Sbjct 105883 CCACCACGAAGACGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCTGCA 105824 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | || |||||||| ||||| ||||| || | ||||| ||||| || || Sbjct 105823 AGGGTGCGCCCATCCTCAAGTTGCTTACCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGA 105764 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||||| | |||||| | |||||| ||| ||||||||| Sbjct 105763 ATACCTTCCTTGTCCTGAATCTTT-GCTTTAACATTGTCAATTGTATCTGAGCTCTCCAC 105705 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || ||||| || || ||||| |||||||| Sbjct 105704 TTCCAATGTGATTGTCTTCCCTGTTAAGGTCTTGACAAAGATCTGCAT 105657 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || |||| ||| |||||||| || |||||| ||||| || || |||| | Sbjct 104654 CCTCCCCTCAGGCGCAGCACTAAATGGAGTGTTGACTCCTTCTGAATATTGTAGTCTGCA 104595 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | || ||||| || || |||||||| || | | ||| ||||| || || Sbjct 104594 AGTGTCCTACCATCCTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 104535 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| ||||||| | ||||||| | |||||||||| ||||||||| Sbjct 104534 ATGCCTTCCTTATCTTGGATCTTT-GCTTTAACGTTGTCAATTGTGTCTGAGCTCTCCAC 104476 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || ||||| |||||||| Sbjct 104475 TTCCAATGTGATGGTCTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 104428 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||||| |||||||||||| || ||||||||||||||| || |||| | Sbjct 105655 CCTCCCCTCAGACGCAGCACCAAATGGAGTGTTGACTCCTTTTGAATGTTGTAGTCTGCA 105596 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | | || || || || || || ||||| || | ||||| || || || || Sbjct 105595 AGTGTCCTCCCATCCTCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGGGGGA 105536 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| |||| |||||| || ||| || || |||||||| Sbjct 105535 ATGCCTTCCTTGTC-CTGAATCTTTGCTTTAACATTATCAATAGTATCAGAACTCTCCAC 105477 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || || || || || || ||||| |||||||| Sbjct 105476 CTCAAGAGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 105429 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||||||||| | ||| || ||| |||| ||||| || ||||| ||||| Sbjct 104846 TCCTTTTGAATGTTATAATCAGCAAGGGTACGCCCGTCATCAAGCTGCTTACCAGCAAAG 104787 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||||| || || || | || ||||| || ||| || | ||| || | Sbjct 104786 ATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTATC-CTGAATCTTAGCTTTCACATT 104728 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| || ||| |||||| ||||| | || || || || || ||||| || || || Sbjct 104727 GTCAATAGTATCTGAGCTCTCTACTTCTAAAGTGATGGTCTTCCCTGTTAAGGTCTTGAC 104668 Query 34695 AAAAATCTGCAT 34706 ||| |||||||| Sbjct 104667 AAAGATCTGCAT 104656 >seq33279 Length=59633 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || | ||| | |||||| ||||||||| ||||| || ||||| ||||| | Sbjct 12458 GCCACCCCTCAAACGGAGCACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGC 12517 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || ||||| || || |||||||| || || | ||| ||||| || || Sbjct 12518 CAGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 12577 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | |||||| | ||| ||||| |||||| | Sbjct 12578 AATTCCCTCCTTGTCCTGGATC-TTGGCCTTAACGTTGTCAATGGTGTCAGAGCTCTCAA 12636 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||||| || || ||||| | |||||||| || |||||||| Sbjct 12637 CCTCGAGAGTTATGGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCAT 12685 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || | ||| | |||||| ||||| ||| ||||| || ||||| ||||||| Sbjct 12230 GCCTCCCCTCAAACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGC 12289 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || ||||| || || |||||||| || || | || ||||| || || Sbjct 12290 CAGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCTGGGGG 12349 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | ||| ||||| |||||| | Sbjct 12350 GATTCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAA 12408 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || || || || | |||||||| || ||||||||| Sbjct 12409 CCTCCAGGGTGATTGTCTTGCCCGTGAGGGTTTTCACGAAGATCTGCATG 12458 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || || || ||||| | Sbjct 12687 CCACCCCTGAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATATTGTAATCGGCC 12746 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || ||||||||||| || || | ||| ||||| || || Sbjct 12747 AGGGTACGGCCATCCTCAAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 12806 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || ||| | ||| ||||| |||||| || Sbjct 12807 ATTCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCGAC 12865 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||| | ||||| || || |||||||| Sbjct 12866 CTCGAGAGTGATTGTCTTTCCGGTGAGGGTTTTGACGAAGATCTGCAT 12913 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| ||||| || |||||| || ||||| ||||| | Sbjct 12915 CCACCCCTGAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCG 12974 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || ||||| || || | | || ||||| || || Sbjct 12975 AGGGTACGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGA 13034 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | |||||| | || ||||| ||||| || Sbjct 13035 ATTCCCTCCTTGTCCTGGATC-TTAGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGAC 13093 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||||| ||||||||||| |||||||| Sbjct 13094 CTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 13141 >seq34423 Length=256361 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| | ||| | ||| | |||||||||| ||||| || ||||| ||||| | Sbjct 118720 GCCTCCTCTCAAACGGAGCACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGC 118779 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || ||||| ||||| || || | | ||| |||||||| || Sbjct 118780 GAGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGG 118839 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| || | ||| ||| | ||| ||||| |||||||| Sbjct 118840 GATTCCCTCCTTGTC-CTGAATCTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCCA 118898 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || || || |||| ||||| || || || |||||| Sbjct 118899 CCTCGAGGGTGATGGTCTTTCCAGTTAGGGTTTTGACGAAGATTTGCATG 118948 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||||||||| | ||| || | | ||||| | ||| || || ||||| Sbjct 118300 CTCCTTCTGGATGTTATAATCAGCAAGAGTCCTTCCATCTTCCAATTGCTTCCCTGCAAA 118359 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || | ||| ||||| || || | ||||||||||| ||| || | ||||| Sbjct 118360 AATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTAACAT 118418 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| |||||| || || | || || ||||| || || | || |||| Sbjct 118419 TGTCTATGGTGTCCGAGCTCTCAACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTCTTCA 118478 Query 34694 CAAAAATCTGCAT 34706 | ||||||||||| Sbjct 118479 CGAAAATCTGCAT 118491 >seq34050 Length=239353 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| |||||| || || || ||||| | || ||||| |||| ||| Sbjct 44582 ACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCCGCTAGGGTTCGGCCGTCCTCA 44641 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | | ||| ||||| ||||| | |||||||||||| | Sbjct 44642 AGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGG 44701 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | ||| ||| | ||| || || ||| || || |||| ||| ||||| || Sbjct 44702 ATC-TTAGCTTTCACGTTGTCAATCGTATCGGAGCTTTCAACCTCCAAGGTAATCGTCTT 44760 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| ||||| || || |||||||| Sbjct 44761 GCCGGTTAGGGTTTTAACGAAGATCTGCAT 44790 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| |||||| || |||||||| || | || || | | |||||||| || Sbjct 43904 TGCAGAGTGGACTCCTTCTGGATGTTATAGTCGGCCAGAGTCCTTCCATCTTCAAGCTGC 43963 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || || | ||| || ||||| || | |||||||||||| ||| ||| Sbjct 43964 TTTCCAGCAAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCT-TGAATTTT 44022 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| || ||||||||| ||| ||||| |||| ||| || || || || || Sbjct 44023 AGCCTTCACGTTATCAATTGTGTCGGAGCTTTCCACCTCCAGGGTAATAGTCTTGCCCGT 44082 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || |||||||| |||||||| Sbjct 44083 GAGGGTCTTCACAAAGATCTGCAT 44106 Score = 109 bits (120), Expect = 3e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||||||||| || ||| ||||| ||||| || || || | || ||||| |||| Sbjct 44350 CAGCACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAGGGTTCGGCCGTC 44409 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||||| || || ||||| || || | | ||| ||||| || || | |||||||||||| Sbjct 44410 CTCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTC 44469 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | |||| || | || ||| | || ||||| ||| || || |||| ||| || | Sbjct 44470 TTGGATC-TTAGCCTTCACGTTGTCTATGGTGTCAGAGCTTTCAACCTCCAAGGTAATAG 44528 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || ||||||| ||||| || || |||||||| Sbjct 44529 TCTTGCCGGTTAGGGTTTTAACGAAGATCTGCAT 44562 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| || || ||| |||||| |||||||| || || | ||| || || | || || Sbjct 44125 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGAGTACGGCCATCCTC 44184 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 ||| || || || ||||| || | | ||||||||| || || | || |||||||| Sbjct 44185 AAGCTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTG 44244 Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||||| | || ||| | ||| || || ||| ||||| |||| ||| || |||| Sbjct 44245 GATCTTC-GCCTTCACGTTGTCAATAGTATCGGAGCTTTCCACCTCCAGGGTGATGGTTT 44303 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | || ||||| ||||||||||| Sbjct 44304 TCCCGGTGAGAGTCTTCACGAAAATCTGCAT 44334 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| |||||| || || || ||||| | || || || |||| || Sbjct 44810 ACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCG 44869 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || ||||| || || | | ||| ||||||||||| | |||||||| ||| || Sbjct 44870 AGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTATCT-TG 44928 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || | || || | || ||||| |||||| || || | || || || || Sbjct 44929 AATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTAATAGTCTT 44988 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| ||||||||||| |||||||| Sbjct 44989 GCCGGTTAGGGTTTTCACAAAGATCTGCAT 45018 >seq31522 Length=43835 Score = 116 bits (128), Expect = 2e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 ||||| || | |||||| | || | ||||||||| ||||| || || | ||||| Sbjct 35404 TCGCCACCACGAAGACGGAGAACAAGATGGAGAGTTGATTCCTTCTGGATACTGTAATCG 35345 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 | ||| || ||| | || ||||| ||||| || |||||||| || |||||||| || || Sbjct 35344 GCAAGAGTGCGCCCATCCTCAAGCTGTTTCCCTGCAAATATCAAGCGCTGTTGATCTGGA 35285 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTC 34655 || | ||| || || || ||||| | || ||| | |||||| ||| ||| || Sbjct 35284 GGAATTCCTTCTTTATCCTGAATCTTC-GCCTTCACGTTCTCAATTGTATCTGAGCTTTC 35226 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||| |||||||| || || | ||||||||||| || ||||| Sbjct 35225 AACTTCTAGGGTGATCGTTTTCCCAGTCAGAGTTTTCACAAAGATTTGCAT 35175 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| ||| || || || || || || || ||||| | || ||||| | || || Sbjct 29154 ACCAGATGCAGCGTCGATTCTTTCTGGATATTGTAATCGGCTAGGGTTCGGCCATCCTCG 29095 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||| || || || || | ||| || || || || | ||| || |||| || Sbjct 29094 AGCTGTTTACCCGCGAAAATCAACCTCTGCTGATCTGGAGGAATTCCTTCTCTGTCC-TG 29036 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| | || ||| || |||||| ||| ||| || ||||| | ||| |||||||| Sbjct 29035 AATTTTCGCCTTCACGTTATCAATTGTATCTGAGCTTTCAACTTCTAGGGTGATCGTTTT 28976 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||||||||||| || ||||| Sbjct 28975 CCCAGTCAGAGTTTTCACAAAGATTTGCAT 28946 >seq33260 Length=58559 Score = 104 bits (114), Expect = 1e-17 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || ||||||||| ||||| || |||| ||| || ||| |||| || || || Sbjct 33997 TGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGCCCGTCCTCGAGCTGC 34056 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||| ||||| | ||||||||||| |||| || Sbjct 34057 TTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATC-TT 34115 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCG 34680 | || || | ||| ||||| || | |||||| || | ||||||||| || || Sbjct 34116 CGCCTTCACATTGTCAATGGTGTC--CGATGACTCCACCTCTAGGGTTATCGTCTTCCCC 34173 Query 34681 GTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | || ||||| || |||||||| || Sbjct 34174 GTCAGGGTCTTCACGAAGATCTGCATTTT 34202 >seq33157 Length=145522 Score = 102 bits (112), Expect = 5e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||||| | ||||| |||||||| ||| || || ||||| || || | Sbjct 122130 CGCCACCGCGGAGACGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCCG 122071 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || |||| || || || || ||||| || || | ||||| ||||| || | Sbjct 122070 CCAAGGTCCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCGGGTG 122011 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||||| ||| ||| | || || | || ||||| | |||| Sbjct 122010 GGATTCCCTCCTTGTCT-TGAATTTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCC 121952 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || |||| ||||||||| || || || | |||||||| || |||||||| || Sbjct 121951 ACCTCCAGGGTTATCGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATCTT 121899 >seq34042 Length=367129 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||||||| |||||| || ||||| || || | || || || |||| || || || Sbjct 85741 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 85800 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||||||||| | || |||||||| |||| || Sbjct 85801 TTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATC-TT 85859 Query 34624 TGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 || || || | || |||| | || | || || || | ||| ||||| || || | Sbjct 85860 TGCCTTCACATTGTCGATGGTGTCCGACGAT-TCAACCTCGAGGGTGATCGTCTTCCCCG 85918 Query 34682 TTAACGTTTTCACAAAAATCTGCATGTT 34709 | | || |||||||| |||||||| || Sbjct 85919 TCAGGGTCTTCACAAAGATCTGCATTTT 85946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314432711634200