Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq34042 122 6e-23 seq34423 118 7e-22 seq33157 107 1e-18 seq31522 107 1e-18 seq33260 104 2e-17 seq33714 102 6e-17 seq33279 102 6e-17 seq34050 95.1 8e-15 seq34436 86.0 4e-12 seq33784 82.4 5e-11 >seq34042 Length=367129 Score = 122 bits (134), Expect = 6e-23 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| ||||| || |||||||| ||||| ||||| || Sbjct 85946 AAAATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACGATCACCCTCGAGGTTGAATCG 85887 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | ||| || ||||| ||||| | ||||| || Sbjct 85886 TCGGACACCATCGACAATGTGAAGGC-AAAGATCCAGGACAAGGAAGGCATCCCGCCGGA 85828 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || |||||||| || || || |||| ||||| | | ||| || Sbjct 85827 CCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTA 85768 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || |||||||| Sbjct 85767 CAACATCCAGAAGGAGTCCAC 85747 >seq34423 Length=256361 Score = 118 bits (130), Expect = 7e-22 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| |||||||| |||||||| || ||||| | | Sbjct 118492 AATGCAGATTTTCGTGAAGACCCTCACTGGAAAAACCATCACTCTTGAGGTTGAGAGCTC 118433 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| | || ||| |||| | || ||| ||||| || || | || ||||| | Sbjct 118432 GGACACCATAGACAATGTTAAGGC-CAAGATTCAGGACAAGGAGGGCATCCCCCCAGACC 118374 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||| || || ||| ||||||| | | | ||| | | ||||| | Sbjct 118373 AGCAGAGGTTGATTTTTGCAGGGAAGCAATTGGAAGATGGAAGGACTCTTGCTGATTATA 118314 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || ||||| || Sbjct 118313 ACATCCAGAAGGAGTCTAC 118295 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || |||||||| || || || || |||||||| || ||||| | | Sbjct 118719 ATGCAAATCTTTGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTTGAAAGCTCA 118660 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || |||||||| Sbjct 118659 GACACAATTGATAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 118600 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||||||||| || || |||| || || | | |||||||||| Sbjct 118599 CAGAGGCTTATCTTCGCCGGCAAACAGCTCGAGGACGGCCGTACCCTCGCCGATTACAAC 118540 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || |||||||| | || || || | ||| | || || ||| Sbjct 118539 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCAGGCTCCGCGGTGGA 118492 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| |||||||| || ||||| || ||||| ||||| || || | | Sbjct 118947 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 118888 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || ||| ||||| || || | || || || || Sbjct 118887 GACACCATTGACAACGTCAAAGCTAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 118828 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| ||||| || || |||| ||||| | | |||||||||| Sbjct 118827 CAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTCGCCGATTACAAC 118768 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| | ||| | || | | ||| ||||||| Sbjct 118767 ATCCAGAAGGAATCCACTCTCCATCTCGTGCTCCGTTTGAGAGGAGG 118721 >seq33157 Length=145522 Score = 107 bits (118), Expect = 1e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || ||||| || || || || || ||| Sbjct 121899 AAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACGATAACCCTGGAGGTGGAGTCC 121958 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | |||||| ||||| || || | || || || Sbjct 121959 TCCGACACCATCGACAATGTGAAGGC-GAAAATTCAAGACAAGGAGGGAATCCCACCCGA 122017 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || ||||| || || ||||| |||| || || || | || || Sbjct 122018 CCAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGGACCTTGGCGGACTA 122077 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || |||||||| || Sbjct 122078 CAACATCCAGAAAGAGTCTAC 122098 >seq31522 Length=43835 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| || || || ||||||||||| || |||||||| | | Sbjct 28946 ATGCAAATCTTTGTGAAAACTCTGACTGGGAAAACGATCACCCTAGAAGTTGAAAGCTCA 29005 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || |||||| |||| |||||| | || |||||||| Sbjct 29006 GATACAATTGATAACGTGAAGGCGAAAATTCAGGACAGAGAAGGAATTCCTCCAGATCAG 29065 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || ||||| || || || | || || ||| ||||||||| Sbjct 29066 CAGAGGTTGATTTTCGCGGGTAAACAGCTCGAGGATGGCCGAACCCTAGCCGATTACAAT 29125 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| || || | ||| | ||| | |||||||| || || Sbjct 29126 ATCCAGAAAGAATCGACGCTGCATCTGGTTCTGAGGTTGCGCGGTGG 29172 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| || || || ||||||||||| || |||||||| | | Sbjct 35175 ATGCAAATCTTTGTGAAAACTCTGACTGGGAAAACGATCACCCTAGAAGTTGAAAGCTCA 35234 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| || |||||||| | || ||||||||| Sbjct 35235 GATACAATTGAGAACGTGAAGGCGAAGATTCAGGATAAAGAAGGAATTCCTCCAGATCAA 35294 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || |||||||| || ||||| || || || | |||||| | | |||||||| Sbjct 35295 CAGCGCTTGATATTTGCAGGGAAACAGCTTGAGGATGGGCGCACTCTTGCCGATTACAGT 35354 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || || || | ||| | ||| Sbjct 35355 ATCCAGAAGGAATCAACTCTCCATCTTGTT 35384 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || || || || ||||| || ||||| | | Sbjct 29174 ATGCAGATATTCGTGAAGACATTAACTGGGAAGACAATTACTCTGGAGGTTGAGAGCTCC 29233 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | |||| | ||||| ||||| | || ||| |||| Sbjct 29234 GATACAATTGATAATGTCAAGGCGAAAA-TCCAAGACAAGGAAGGCATTCCTCCAAATCA 29292 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || |||||||| || ||||| || || || | |||||| | | ||||||||| Sbjct 29293 ACAGCCCTTGATATTTGCAGGGAAACAGCTTGAGGATGGGCGCACTCTTGCCGATTACAA 29352 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| | || || ||||| Sbjct 29353 CATTCTTAAGGAATCCAC 29370 >seq33260 Length=58559 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| ||||| || ||||| || || || || || || Sbjct 34202 AAAATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATAACCCTAGAGGTGGAGTCA 34143 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| |||| ||| | || | || || ||||| || || | |||||||| Sbjct 34142 TCGGACACCATTGACAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCAGA 34084 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || ||||| || || || || |||| ||||| | | || || Sbjct 34083 CCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCCTTGCAGACTA 34024 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| ||||| ||||| || Sbjct 34023 CAACATCCAAAAGGAGTCTAC 34003 >seq33714 Length=161502 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || || || |||||||| |||||||| | || Sbjct 22628 ATGCAGATCTTTGTGAAAACTCTTACTGGCAAGACCATCACTCTTGAAGTTGAGAGCTCG 22687 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | || || || ||||| | || |||||||| Sbjct 22688 GATACCATTGACAATGTGAAGGCTAAGA-TTCAAGATAAGGAAGGAATTCCTCCAGATCA 22746 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || ||||| | || || | | |||||||| Sbjct 22747 ACAAAGGCTGATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACACTTGCTGATTACAA 22806 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||||||||| Sbjct 22807 CATCCAAAAAGAGTCCAC 22824 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || || || |||||||| || ||||| | | Sbjct 22109 ATGCAGATCTTTGTCAAAACACTAACTGGCAAGACCATCACTCTTGAGGTTGAGAGCTCA 22168 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | || || || ||||| | || |||||||| Sbjct 22169 GATACCATTGACAATGTGAAGGCTAAGA-TTCAAGATAAGGAAGGGATTCCCCCAGATCA 22227 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| || || || || ||||| | || ||| ||| || ||||| Sbjct 22228 ACAGAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTAGCAGACTACAA 22287 Query 23790 CATACAAAAAGAGTCCAC 23807 || |||||||||||||| Sbjct 22288 TATCCAAAAAGAGTCCAC 22305 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || || || ||||| || || ||||| | | Sbjct 21653 ATGCAGATCTTTGTAAAAACTCTAACTGGCAAGACCATCACCCTTGAGGTTGAGAGCTCA 21712 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | |||| || ||| || || ||||| | || ||||||||| Sbjct 21713 GATACCATTGACAATGTAAAGGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 21772 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || || || | ||||||| | | || ||||| Sbjct 21773 CAGAGACTGATTTTTGCTGGAAAGCAGCTTGACGATGGACGCACTCTTGCAGACTACAAT 21832 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||||||||| Sbjct 21833 ATCCAAAAAGAGTCCAC 21849 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || || || ||||| || || ||||| | Sbjct 22856 ATGCAGATCTTTGTCAAAACGCTAACTGGGAAGACCATCACCCTGGAGGTTGAGAGTTCA 22915 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || |||| | | ||||| ||||| | || ||||| || Sbjct 22916 GATACCATTGACAATGTGAAGGCAAAGA-TCCAAGACAAGGAAGGCATTCCTCCAGACCA 22974 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || ||||| || ||||| ||||| || | | || | | || ||||| Sbjct 22975 ACAGCGTTTGATCTTTGCAGGTAAACAGCTGGATGATGGGAGGACACTTGCAGACTACAA 23034 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || | ||||| || Sbjct 23035 CATTCAGAAGGAGTCTACGCTCCATTTGGT 23064 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 ||||||| | | |||||||| || || || || || || ||||| || || |||||||| Sbjct 21412 TTAATTATTGCAGATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACTATTACTCTCGA 21471 Query 23658 AGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716 ||||| | || || |||| ||| |||| |||| | | || || ||||| Sbjct 21472 GGTTGAGAGTTCTGATACCATTGATAATGTTAAGGCAAAGA-TCCAAGATAAGGAAGGAA 21530 Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776 | || |||||||||||||| | || ||||| || || || || ||||| | || || Sbjct 21531 TTCCTCCAGATCAACAGCGGCTGATTTTTGCAGGAAAGCAGCTTGAAGATGGCCGTACAC 21590 Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCAC 23807 | | || || || || ||||| ||||| || Sbjct 21591 TTGCAGACTATAATATCCAAAAGGAGTCTAC 21621 >seq33279 Length=59633 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| ||||| || || |||||||| ||||| | | Sbjct 12685 ATGCAGATCTTCGTGAAAACCCTCACCGGAAAGACCATAACTCTCGAGGTTGAGAGCTCT 12626 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || |||| | || || ||||| || || | || ||||| || Sbjct 12625 GACACCATTGACAACGTTAAGGC-CAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 12567 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| || || || || || | || || | | ||||||||| Sbjct 12566 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAA 12507 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 12506 CATCCAGAAGGAATCCAC 12489 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || ||||| ||||| || || | | Sbjct 12229 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCC 12170 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || |||||| ||||||||||| | || |||||||| Sbjct 12169 GACACAATTGATAACGTGAAGGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 12110 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || || ||||| || | ||||| | | ||||||||| Sbjct 12109 CAGAGGCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTTGCTGATTACAAC 12050 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||||| || | ||| || | || || Sbjct 12049 ATTCAGAAGGAGTCTACCCTTCATTTGGTGCTCAGGCTGAGGGGTGG 12003 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| ||||| || ||||||||||| || || | | Sbjct 12913 ATGCAGATCTTCGTCAAAACCCTCACCGGAAAGACAATCACTCTCGAGGTCGAGAGCTCC 12854 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || ||||| || Sbjct 12853 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 12794 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || || || || || | || || | | ||||||||| Sbjct 12793 CAGAGGTTGATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGTACCCTGGCCGATTACAAT 12734 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 12733 ATCCAGAAGGAGTCAAC 12717 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || ||||| || || ||| | || || || | | Sbjct 12001 ATGCAGATATTTGTGAAGACCCTGACTGGAAAGACCATTACTTTGGAGGTGGAAAGCTCT 11942 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | ||| | || | || ||||| || || | || |||||||| Sbjct 11941 GACACTATTGACAATGTGAAAGCCAAGA-TTCAAGACAAGGAGGGCATCCCACCAGATCA 11883 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || ||||||| | | | ||| | | ||||| || Sbjct 11882 GCAGAGGCTGATCTTTGCTGGAAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTATAA 11823 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 11822 CATCCAGAAAGAGTCCAC 11805 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||||||||| || || ||||| || || ||||| | | Sbjct 12457 ATGCAGATCTTCGTGAAAACCCTCACGGGCAAGACAATCACCCTGGAGGTTGAGAGCTCT 12398 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || ||||| || Sbjct 12397 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 12338 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || |||||||| || || || || || | || || | | ||||||||| Sbjct 12337 CAAAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGATTACAAC 12278 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || ||||| Sbjct 12277 ATCCAGAAGGAATCCAC 12261 >seq34050 Length=239353 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||||||||| || || || ||||| || | || ||||| | | Sbjct 44790 ATGCAGATCTTCGTTAAAACCCTAACCGGCAAGACGATTACCTTGGAGGTTGAAAGCTCC 44731 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | ||| || || ||||| || || | |||||||| || Sbjct 44730 GATACGATTGACAACGTGAAAGCTAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAG 44671 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || || || || |||| || || ||| |||||||| Sbjct 44670 CAGAGGCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGAACCCTAGCGGATTACAAT 44611 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || |||||||| | ||||| ||| | | ||| | ||||| Sbjct 44610 ATCCAGAAGGAGTCCACCCTTCATTTGGTTCTCCGATTGAGGGGAGG 44564 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || || ||||| || ||||| ||||| || || || || | | Sbjct 44335 AATGCAGATTTTCGTGAAGACTCTCACCGGGAAAACCATCACCCTGGAGGTGGAAAGCTC 44276 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| | | || || || ||||| ||||| | || || || || Sbjct 44275 CGATACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 44216 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| ||||| || || || || | || ||| | | ||| ||||| Sbjct 44215 ACAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTGCCGACTACAA 44156 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 44155 CATTCAGAAGGAGTCCAC 44138 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || ||||||||||| || || || || || || || || | | Sbjct 44107 AATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATTACCCTGGAGGTGGAAAGCTC 44048 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | | || |||||| ||||| || || | || || ||||| Sbjct 44047 CGACACAATTGATAACGTGAAGGCTAAAATTCAAGACAAGGAGGGGATTCCACCGGATCA 43988 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || || || ||||| | | | ||| | | ||| || || Sbjct 43987 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTGGCCGACTATAA 43928 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 43927 CATCCAGAAGGAGTCCAC 43910 >seq34436 Length=291992 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| ||||| || || |||||||| ||||||||||| ||||| || Sbjct 95158 AAAATGCAGATTTTCGTGAAAACTCTAACCGGAAAAACCATCACTCTCGAGGTTGAATCG 95099 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715 | ||||| | || ||| |||| | || ||| |||||||||||| Sbjct 95098 AGCGACACAATCGACAATGTTAAGGC-TAAGATTCAAGACAAAGAAGGT 95051 >seq33784 Length=161669 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||| | || || || || |||||| | ||||| || | | Sbjct 104656 ATGCAGATCTTTGTCAAGACCTTAACAGGGAAGACCATCACTTTAGAAGTAGAGAGCTCA 104715 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | ||| | || | || || || |||||| | || |||||||| Sbjct 104716 GATACTATTGACAATGTGAAAGCTAAGA-TTCAGGATAAGGAAGGTATTCCTCCAGATCA 104774 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || |||| || || | | ||||| || Sbjct 104775 ACAAAGACTGATCTTTGCTGGTAAGCAGCTTGATGACGGGCGTACCCTTGCTGATTATAA 104834 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| ||||| || || ||| Sbjct 104835 CATTCAAAAGGAATCAACA 104853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337690751319200