Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1476 154 3e-32 seq167 150 4e-31 seq707 147 5e-30 seq229 138 3e-27 seq169 134 3e-26 seq1027 131 4e-25 seq41 129 1e-24 seq100 116 9e-21 seq3739 105 2e-17 >seq1476 Length=5289327 Score = 154 bits (170), Expect = 3e-32 Identities = 174/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || |||| || |||||| |||||||| |||||||| Sbjct 642521 TCCACCACGCAGACGCAGGACAAGGTGAAGGGTTGATTCTTTCTGGATATTGTAGTCGGC 642580 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | |||||| || || || || || || |||||||| | || ||| ||||| Sbjct 642581 CAGAGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAAGATCAGCCTTTGCTGA---TCTGG 642637 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || ||||| ||||||||||||||||| ||||| || || || | ||| || || Sbjct 642638 AGGAATCCCTTCCTTATCCTGGATTTTCGCCTTCACATTATCGATTGTATCACTGCTCTC 642697 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| |||||||| ||||| ||||||||||| || |||||| Sbjct 642698 CACTTCCAGAGTGATAGTCTTCCCTGTCAGGGTCTTGACGAAGATTTGCATT 642749 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || || |||| || || || || || ||||| ||||| Sbjct 642978 CCTCCACGGAGACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 643037 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| ||||||||| ||||||||||| | ||| || |||| Sbjct 643038 AAGGTACGCCCGTCCTCTAGTTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGTGGG 643097 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| || |||||||| || |||| ||||| || || Sbjct 643098 ATGCCCTCCTTGTCTTGAATTTTTGCCTTCACGTTGTCAATAGTGTCGCTGCTCTCAACC 643157 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 643158 TCGAGGGTGATGGTCTTCCCAGTCAAGGTCTTAACGAAAATCTGCAT 643204 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| |||| ||| || || || || || || ||||| Sbjct 643206 CCTCCACGGAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCC 643265 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| |||||||| ||||||||||| | ||| || ||||||| Sbjct 643266 AAGGTACGCCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTG---ATCTGGG 643322 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| |||||||| || || || || || || || || | ||||| ||| Sbjct 643323 GGAATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGCTACTTTCA 643382 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || |||| ||||||||||| |||||||| Sbjct 643383 ACCTCCAGAGTAATAGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 643432 Score = 123 bits (136), Expect = 6e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || || || || || || | ||| ||| || || ||||| || ||||| Sbjct 642749 TCCACCACGAAGCCTGAGCACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCGGC 642808 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| | ||| || || ||||||||||| | ||| || ||| Sbjct 642809 CAAAGTTCGGCCATCTTCCAGTTGCTTACCGGCGAAGATCAGCCTCTGCTGGTCTGGTGG 642868 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || || || ||||| || |||||||| || |||| || || || || Sbjct 642869 GATGCCCTCCTTGTCTTGAATTTTTGCCTTCACGTTATCAATAGTGTCACTGCTCTCAAC 642928 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 642929 CTCCAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 642976 >seq167 Length=3484751 Score = 150 bits (166), Expect = 4e-31 Identities = 151/195 (77%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||||||||| |||||||| || | ||||||||| | ||| ||||| ||||| Sbjct 2202532 TTCCTTCTGGATATTATAATCGGCGAGTGTTCTTCCGTCTTCGAGTTGCTTTCCAGCGAA 2202591 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| ||||| || ||| |||||||| || |||||||| || || || ||||| Sbjct 2202592 GATCAACCGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2202651 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || |||| ||| |||| || || || ||||| |||||||| |||||||| || || Sbjct 2202652 GTCGATAGTATCGGAGCTC---TCCACCTCTAGCGTTATCGTCTTTCCGGTCAGGGTTTT 2202708 Query 288459 GACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2202709 CACGAAGATCTGCAT 2202723 Score = 131 bits (144), Expect = 4e-25 Identities = 171/234 (73%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||||| || || || |||| ||| ||||| |||||||||||||| || Sbjct 1288849 CCACCACGGAGTCGGAGGACAAGGTGAAGAGTGGACTCTTTCTGGATATTATAGTCTGCA 1288790 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| ||||| | |||||| || || || |||| || ||||| || ||| Sbjct 1288789 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGTTGG---TCCGGG 1288733 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||||||||| || ||||| || || || | || |||| Sbjct 1288732 GGAATACCCTCCTTGTCCTGGATTTTAGCCTTCACATTGTCAATTGTGTCAGAGCTC--- 1288676 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| || || || ||||| ||||| || ||||| || ||||||||| Sbjct 1288675 TCAACCTCGAGGGTAATGGTTTTCCCTGTCAGGGTTTTGACAAAAATCTGCATT 1288622 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || || || || || |||| || ||| ||||||||||| || || || Sbjct 2202268 TCCACCGCGAAGCCTGAGAACAAGGTGAAGAGTAGATTCCTTTTGGATATTGTAATCAGC 2202327 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| || || || || ||||| |||||||| | ||||| || |||||| Sbjct 2202328 AAGAGTCCTTCCATCCTCCAACTGCTTTCCAGCGAAGATTAACCGCTGCTG---ATCTGG 2202384 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || ||||| || || || || || || || ||||| || || | |||| ||| Sbjct 2202385 GGGAATACCTTCCTTGTCTTGAATCTTAGCCTTGACGTTGTCAATTGTATCGGAGCTTTC 2202444 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||| || || || || || |||||||||||||| Sbjct 2202445 CACCTCCAGCGTTATAGTCTTTCCAGTTAGGGTTTTCACGAATATCTGCAT 2202495 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||||| || || | |||| ||| ||||| || ||||||||||| || Sbjct 1288165 CCACCACGGAGTCGGAGCACCAAGTGAAGCGTAGACTCTTTCTGAATATTATAGTCAGCA 1288106 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| ||||| || || || |||| | || ||| ||| Sbjct 1288105 AGTGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAAATCAATCTTTGCTGATCTGGTGGA 1288046 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || || || ||||| || || || || || || | ||| ||| || Sbjct 1288045 ATACCCTCCTTGTCTTGTATTTTGGCCTTGACATTATCGATGGTATCCGAACTC---TCA 1287989 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || || ||||||||||| ||||||||||| Sbjct 1287988 ACTTCCAAAGTGATAGTCTTGCCAGTGAGAGTCTTGACAAATATCTGCAT 1287939 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| ||||| || || || || ||||| || | ||| || || || || Sbjct 1287902 TTCCTTTTGGATATTGTAGTCTGCAAGTGTACGCCCGTCCTCGAGTTGCTTACCAGCAAA 1287843 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | ||| || |||||| ||||| ||||| |||||||| || ||||| || Sbjct 1287842 GATAAGCCTCTGCTG---GTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTTGCTTTGAC 1287786 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | ||| ||| || || || ||||| ||||| || || || || || Sbjct 1287785 ATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTT 1287726 Query 288459 GACGAATATCTGCAT 288473 || || || ||||| Sbjct 1287725 CACAAAGATTTGCAT 1287711 >seq707 Length=3952773 Score = 147 bits (162), Expect = 5e-30 Identities = 172/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||| || |||||||| |||||||| Sbjct 1981719 CCACCACGAAGACGAAGCACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGCA 1981778 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || || |||| || ||||| ||||||||||| ||||| || ||| Sbjct 1981779 AGAGTGCGGCCATCCTCTAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTG---GTCTGGA 1981835 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| || |||||||| || || || || || || |||| ||| || || Sbjct 1981836 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATAGTATCAGAAGACTCA 1981895 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || |||||||||||||| || || || ||||| ||||||||| Sbjct 1981896 ACCTCTAGGGTTATCGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATT 1981946 >seq229 Length=2021663 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| |||||| ||||| || |||| Sbjct 544593 CATG-CCACCACGAAGACGTAGAACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGT 544651 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || |||||||| ||||| | || ||||| || || |||| | ||| ||| Sbjct 544652 CTGCAAGGGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTG 544711 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || || || ||||| || || || ||||| || || |||| ||| ||| Sbjct 544712 GTGGGATGCCCTCCTTGTCCTGTATCTTGGCCTTCACATTGTCAATAGTATCAGAGCT-- 544769 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | |||||| |||||||| ||||||||||| || ||||||||||| Sbjct 544770 -TTCAACTTCCAACGTGATTGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 544823 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | || | ||| ||| || ||||| || |||| Sbjct 545049 CATG-CCACCACGAAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGT 545107 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || || || || || |||| | ||| || | Sbjct 545108 CTGCAAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAG 545167 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| || || || |||||||| || || ||||| || ||||| | || || Sbjct 545168 GTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCTATTGTGTCAGAACTTT 545227 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct 545228 CAACTTCCAGGGTGATTGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 545279 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | || | ||| ||| || ||||| || |||| Sbjct 546948 CATG-CCACCACGAAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGT 547006 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || || || || || |||| | ||| || | Sbjct 547007 CTGCAAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAG 547066 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| || || || |||||||| || || ||||| || ||||| | || || Sbjct 547067 GTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCTATTGTGTCAGAACTTT 547126 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct 547127 CAACTTCCAGGGTGATTGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 547178 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | || | ||| ||| || ||||| || |||| Sbjct 545505 CATG-CCACCACGAAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGT 545563 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || ||||| |||||||||| | ||| || Sbjct 545564 CTGCAAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTG 545623 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||||||||| |||||||| || || || || || || || | || |||| Sbjct 545624 GTGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC- 545682 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || ||||| || || || || ||||| Sbjct 545683 --TCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 545735 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | || | ||| ||| || ||||| || |||| Sbjct 547404 CATG-CCACCACGAAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGT 547462 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || ||||| |||||||||| | ||| || Sbjct 547463 CTGCAAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTG 547522 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||||||||| |||||||| || || || || || || || | || |||| Sbjct 547523 GTGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC- 547581 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || ||||| || || || || ||||| Sbjct 547582 --TCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 547634 >seq169 Length=810068 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || ||||| | ||| |||||||||||| ||||| ||||| Sbjct 364386 TCCACCGCGGAGCCGGAGAACCAGATGCAGAGTGGATTCTTTTTGGATGTTATAATCGGC 364327 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || |||| || ||||| ||||| |||| ||||| || | ||| Sbjct 364326 AAGAGTCCGGCCATCCTCTAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCAGGTGG 364267 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || ||||| || || || ||||| ||||| || || || || | ||| ||| ||| Sbjct 364266 AATACCTTCCTTGTCTTGAATTTTGGCTTTGACATTATCAATTGTATCTGAGCT---TTC 364210 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| ||||| |||||||| || || |||||||| Sbjct 364209 CACCTCCAAAGTTATAGTCTTGCCGGTGAGAGTCTTCACAAAAATCTGCAT 364159 >seq1027 Length=3367805 Score = 131 bits (144), Expect = 4e-25 Identities = 174/238 (73%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||||| ||| || | || | ||| ||| || |||||||| |||| Sbjct 416378 CATG-CCACCTCGGAGTCGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGT 416436 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || |||| |||||||| || || ||||| | ||| || | Sbjct 416437 CAGCAAGTGTGCGGCCATCCTCTAGCTGTTTTCCAGCAAAAATCAGCCTCTGCTGG---T 416493 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| || ||||| ||||||||||| || || || || || ||||| | || || Sbjct 416494 CGGGGGGAATGCCTTCCTTATCCTGGATCTTAGCCTTGACATTGTCTATGGTGTCAGAGC 416553 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||| ||||| || || || ||||| || ||||||||||| Sbjct 416554 TC---TCCACTTCCAGTGTGATTGTCTTGCCAGTGAGGGTCTTTACAAATATCTGCAT 416608 Score = 113 bits (124), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || || || || ||||| || || || | ||| ||||| || || Sbjct 416645 TTCCTTTTGGATGTTGTAATCAGCAAGTGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAA 416704 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || || | |||||||||||| |||||||||| | | |||||||| || Sbjct 416705 GATAAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTATCCTGGA-TCTGGCTTTCACATT 416763 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||| || || || ||||| || ||||| || || ||||| || Sbjct 416764 GTCGATAGTATCTGAACTTTCCACCTCAAGTGTGATGGTTTTCCCAGTAAGTGTCTTCAC 416823 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 416824 AAAGATCTGCAT 416835 >seq41 Length=2736928 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||| || ||||| || |||||||| Sbjct 677240 CCACCACGAAGACGAAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 677299 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || || || | || ||||| ||||||||||| ||||| || ||| Sbjct 677300 AGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTG---GTCTGGA 677356 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| || |||||||| || || || || || || || | || || || Sbjct 677357 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAAGACTCA 677416 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||||||||| || || || || ||||| ||||||||| Sbjct 677417 ACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATT 677467 >seq100 Length=1654266 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | ||| | ||| ||| || ||||| || |||||||| Sbjct 547481 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 547422 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| ||||| ||||| || | ||| || || ||| Sbjct 547421 AGGGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGG---TCCGGG 547365 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| || || || || || ||||| | |||| ||| Sbjct 547364 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCTATTGTATCGGAGCTC--- 547308 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| ||||||||||| || ||||| || || |||||||| Sbjct 547307 TCAACTTCCAAGGTGATGGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 547255 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | ||| | ||| ||| || ||||| || |||||||| Sbjct 554550 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 554491 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| ||||| ||||| || | ||| || || ||| Sbjct 554490 AGGGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGG---TCCGGG 554434 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| || || || || || ||||| | |||| ||| Sbjct 554433 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCTATTGTATCGGAGCTC--- 554377 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| ||||||||||| || ||||| || || |||||||| Sbjct 554376 TCAACTTCCAAGGTGATGGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 554324 >seq3739 Length=230 Score = 105 bits (116), Expect = 2e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 ||||| || || ||||| || ||||| | || || || || || |||| | ||| || Sbjct 230 TAGTCTGCAAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGG 171 Query 288358 GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 | |||||| || || || |||||||| || || ||||| || ||||| | || Sbjct 170 TCAGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCTATTGTGTCAGAA 111 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct 110 CTTTCAACTTCCAGGGTGATTGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179563351324272