Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq167 132 5e-26 seq229 123 3e-23 seq100 111 2e-19 seq596 102 9e-17 seq169 100 3e-16 seq4665 98.7 1e-15 seq1476 98.7 1e-15 seq1027 96.9 4e-15 seq707 93.3 5e-14 seq41 89.7 6e-13 >seq167 Length=3484751 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || || |||| ||||||||| | |||| |||||||| |||||||| || || Sbjct 1287938 ACCACCCCTCAATCGCAGCACCAAATGGAGTGTGGATTCCTTTTGGATATTGTAGTCTGC 1287879 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || ||| |||| || || ||||||||||| || || || | ||||||||| | || Sbjct 1287878 AAGTGTACGCCCGTCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGGGG 1287819 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| |||||| ||| ||| ||||| | | | |||||| |||||| Sbjct 1287818 AATTCCCTCTTTGTCCTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 1287759 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || ||||| || || || || |||||||||||||| Sbjct 1287758 CTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTCACAAAGATTTGCAT 1287711 Score = 122 bits (134), Expect = 9e-23 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||||||||| ||| |||||| ||||| ||||| ||||| || || ||| | Sbjct 1288382 ACGAAGCACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGCCC 1288323 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||||||||| || || || | ||||||||| | || | | |||||| Sbjct 1288322 ATCCTCGAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTT 1288263 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || ||| | | | | ||||| |||| || || || | || Sbjct 1288262 GTCTTGGATCTTGGCTTTCACATTGTCAATGGTGTCAGAGCTC---TCAACCTCCAAGGT 1288206 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| ||||| |||| || || |||||||||||||| Sbjct 1288205 GATGGTCTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 1288167 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||||||||| | |||| ||||| || ||||| || ||||| ||||| || Sbjct 2202496 ACCTCCTCTTAAACGGAGGACCAGATGCAGAGTCGATTCCTTCTGGATATTATAATCGGC 2202555 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || || ||||| |||||||| || | ||||||||||| | ||| Sbjct 2202556 GAGTGTTCTTCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAACCGCTGCTGGTCTGGTGG 2202615 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||||| ||| || |||| ||| | | | || || |||| | Sbjct 2202616 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATAGTATCGGAGCTC---T 2202671 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | ||| || || || || || || || || || ||||| ||||| Sbjct 2202672 CCACCTCTAGCGTTATCGTCTTTCCGGTCAGGGTTTTCACGAAGATCTGCAT 2202723 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| |||||||||||||| ||||||| | || || | |||||| |||||||| Sbjct 2202305 TCCTTTTGGATATTGTAATCAGCAAGAGTCCTTCCATCCTCCAACTGCTTTCCAGCGAAG 2202364 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | |||||||| || | || | | ||||||| | ||| | || | |||| ||| Sbjct 2202365 ATTAACCGCTGCTGATCTGGGGGAATACCTTCCTTGT-CTTGAATCTTAGCCTTGA-CGT 2202422 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || ||| |||||| || | ||| || || || || ||||| || || | Sbjct 2202423 TGTCAATTGTATCGGAGCTTTCCACCTCCAGCGTTATAGTCTTTCCAGTTAGGGTTTTCA 2202482 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 2202483 CGAATATCTGCAT 2202495 >seq229 Length=2021663 Score = 123 bits (136), Expect = 3e-23 Identities = 158/214 (74%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| |||||| ||||||||||| ||||| ||||| ||| | || || Sbjct 547653 CACCAAGTGGAGAGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTGCGCCCATCCTC 547712 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||||||||||||||| || || | ||||||||| | ||| | | ||| |||||| | Sbjct 547713 AAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCTTTGTCC-T 547771 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 42174 || |||||| | | | | | | | ||||| ||| |||||| || | ||||| | Sbjct 547772 GAATTTTTGCCTTAACATTGTCAATGGTGTCTGAGCT---TTCCACCTCAAGGGTGATTG 547828 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| || || || || || ||||| ||||| Sbjct 547829 TCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 547862 Score = 100 bits (110), Expect = 3e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| |||||| ||||||||||| ||||| ||||| ||| | || || Sbjct 545754 CACCAAGTGGAGAGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTGCGCCCATCCTC 545813 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||||||||||||||| || || | ||||||||| | ||| | | ||| |||||| Sbjct 545814 AAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCTTTGTCC 545871 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||| || || ||||| ||||| || || || | || || Sbjct 544843 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 544902 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||||||||| || || || | ||||||||| | || | | ||| |||||| || Sbjct 544903 AGTTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATCCCCTCTTTGTCC-TG 544961 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||||| |||| | | | ||||| ||| ||| || || | ||||| || Sbjct 544962 AATTTTTGCCTTGACATTATCAATGGTGTCTGAGCT---TTCGACTTCCAATGTGATAGT 545018 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || ||||||||||| Sbjct 545019 CTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 545051 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||| || || ||||| ||||| || || || | || || Sbjct 545299 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 545358 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||||||||| || || || | ||||||||| | ||| | | ||| |||||| || Sbjct 545359 AGTTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCC-TG 545417 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | | |||| |||| | | | ||||| ||| ||| || || | ||||| || Sbjct 545418 AATCTTTGCCTTGACATTATCAATGGTGTCTGAGCT---TTCAACTTCCAATGTGATAGT 545474 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || ||||||||||| Sbjct 545475 CTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 545507 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||| || || ||||| ||||| || || || | || || Sbjct 547198 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 547257 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||||||||| || || || | ||||||||| | ||| | | ||| |||||| || Sbjct 547258 AGTTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCC-TG 547316 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | | |||| |||| | | | ||||| ||| ||| || || | ||||| || Sbjct 547317 AATCTTTGCCTTGACATTATCAATGGTGTCTGAGCT---TTCAACTTCCAATGTGATAGT 547373 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || ||||||||||| Sbjct 547374 CTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 547406 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||| ||| ||||| || || ||||| || || || || ||| | || || Sbjct 545527 ACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGCCCATCTTCC 545586 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| || | | ||||||||| | ||| | | || |||||| | Sbjct 545587 AGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCTTCTTTGTCCTGG 545646 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || |||| | | | ||||| |||| || || || | |||||||| Sbjct 545647 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCAACCTCAAGGGTGATGGTC 545703 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || || |||||||||||||| Sbjct 545704 TTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 545735 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||| ||| ||||| || || ||||| || || || || ||| | || || Sbjct 547426 ACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGCCCATCTTCC 547485 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| || | | ||||||||| | ||| | | || |||||| | Sbjct 547486 AGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCTTCTTTGTCCTGG 547545 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || |||| | | | ||||| |||| || || || | |||||||| Sbjct 547546 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCAACCTCAAGGGTGATGGTC 547602 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || || |||||||||||||| Sbjct 547603 TTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 547634 >seq100 Length=1654266 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| ||| | |||||| || | ||| |||||| || || ||||| || || Sbjct 547253 CCACCTCTTAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 547194 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || ||||| || || || | |||||| || | || Sbjct 547193 AGGGTACGGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGCTGATCTGGGGGA 547134 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || |||||||||| ||| || ||| | | | | ||||| |||| ||| Sbjct 547133 ATGCCCTCCTTGTCCTGGATCTTAGCTTTTACGTTATCAATGGTGTCTGAGCTC---TCC 547077 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||||| || ||||| || || ||||||||||||||||||||| Sbjct 547076 ACTTCCAAAGTGATTGTCTTGCCAGTGAGTGTCTTTACAAAGATTTGCATT 547026 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| ||| | |||||| || | ||| |||||| || || ||||| || || Sbjct 554322 CCACCTCTTAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 554263 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || ||||| || || || | |||||| || | || Sbjct 554262 AGGGTACGGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGCTGATCTGGGGGA 554203 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || |||||||||| ||| || ||| | | | | ||||| |||| ||| Sbjct 554202 ATGCCCTCCTTGTCCTGGATCTTAGCTTTTACGTTATCAATGGTGTCTGAGCTC---TCC 554146 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||||| || ||||| || || ||||||||||||||||||||| Sbjct 554145 ACTTCCAAAGTGATTGTCTTGCCAGTGAGTGTCTTTACAAAGATTTGCATT 554095 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||| | ||||| || | || |||||||||||| || || || || Sbjct 547025 CCACCTCTAAGACGGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTATAGTCCGCA 546966 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | ||| || ||||| || || | | |||||| || | || Sbjct 546965 AGGGTACGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCAGGGGGA 546906 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTC 42157 | | ||||||||| ||| |||| | || ||| | || ||||| ||| ||| Sbjct 546905 ATCCCTTCCTTGTCC-TGAATTTTGGCTTTTACGTTGTCAATAGTGTCTGAGCT---TTC 546850 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | |||||||| ||||| || || || || |||||||||||||| Sbjct 546849 CACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATTTGCAT 546799 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||| | ||||| || | || |||||||||||| || || || || Sbjct 554094 CCACCTCTAAGACGGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTATAGTCCGCA 554035 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | ||| || ||||| || || | | |||||| || | || Sbjct 554034 AGGGTACGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCAGGGGGA 553975 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTC 42157 | | ||||||||| ||| |||| | || ||| | || ||||| ||| ||| Sbjct 553974 ATCCCTTCCTTGTCC-TGAATTTTGGCTTTTACGTTGTCAATAGTGTCTGAGCT---TTC 553919 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | |||||||| ||||| || || || || |||||||||||||| Sbjct 553918 CACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATTTGCAT 553868 >seq596 Length=4721113 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || || | ||||| || | || |||||| ||||| ||||| || || Sbjct 1300448 ACCACCTCTCAAGCGAAGCACCAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCTGC 1300507 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| |||| || ||||| || |||||||| || || ||||||||||| | ||| Sbjct 1300508 GAGGGTCCTGCCGTCTTCCAGCTGTTTTCCAGCGAAGATTAGACGCTGCTGGTCCGGTGG 1300567 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||||| ||| || ||| | | | | || ||| || || || Sbjct 1300568 AATTCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATGGTATCGGAAGACTCAAC 1300627 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 |||| || ||||| || |||||||| || || || ||||| ||||| || Sbjct 1300628 CTCGAGGGTAATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1300678 >seq169 Length=810068 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | || | ||| | ||| |||||||| ||||||||||| || Sbjct 364157 CCTCCTCTCAGACGAAGAACAAGATGAAGAGTGGATTCCTTTTGTATATTGTAATCGGCG 364098 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||||||||| ||||| || || | |||||||| | || Sbjct 364097 AGGGTACGGCCATCCTCAAGCTGCTTACCGGCGAAAATCAGCCTTTGCTGGTCAGGAGGA 364038 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | | ||||| ||| ||| | || | | | ||| | | | ||||| |||| || Sbjct 364037 ATTCCTTCCTTATCC-TGAATCTTAGCCTTAACGTTGTCGATTGTGTCGGAGCTC---TC 363982 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || || |||||||| || || || || |||||||||||||| Sbjct 363981 GACCTCGAGAGTTATAGTTTTGCCGGTGAGGGTTTTAACAAAGATTTGCAT 363931 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||||| ||| || ||||| || || ||||| || |||||||| | || ||| Sbjct 364367 ACCAGATGCAGAGTGGATTCTTTTTGGATGTTATAATCGGCAAGAGTCCGGCCATCCTCT 364308 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | ||||||||||| | ||| | | ||||||| | || Sbjct 364307 AGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCAGGTGGAATACCTTCCTTGT-CTTG 364249 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||| | ||||| | | | || || ||| |||||| || | || || || Sbjct 364248 AATTTTGGCTTTGACATTATCAATTGTATCTGAGCT---TTCCACCTCCAAAGTTATAGT 364192 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| ||||| || ||||| Sbjct 364191 CTTGCCGGTGAGAGTCTTCACAAAAATCTGCAT 364159 >seq4665 Length=296 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||| || || ||||| ||||| || || || | || || Sbjct 296 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 237 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||||||||| || || || | ||||||||| | || | | ||| |||||| || Sbjct 236 AGTTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATCCCCTCTTTGTCC-TG 178 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||||| |||| | | | ||||| ||| ||| || || | ||||| || Sbjct 177 AATTTTTGCCTTGACATTATCAATGGTGTCTGAGCT---TTCGACTTCCAATGTGATAGT 121 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || ||||||||||| Sbjct 120 CTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 88 >seq1476 Length=5289327 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || ||||||||||| |||| ||| || | || || ||||| || || || || Sbjct 643469 CTCCTTCTGGATATTGTAATCGGCCAAAGTACGGCCATCTTCGAGCTGTTTCCCGGCAAA 643528 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | || ||||| |||||| ||||| ||| Sbjct 643529 GATAAGACGCTGCTGGTCTGGCGGGATACCTTCTTTGTCTTGGATTTTGGCTTTGA-CGT 643587 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||||| || || |||| ||||| || ||||| || || ||||| | Sbjct 643588 TGTCGATGGTGTCGCTGCTCTCTACCTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTAA 643647 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 643648 CGAAGATCTGCAT 643660 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| |||||||||||||| |||| ||| || | || || || |||||||| ||||| Sbjct 642786 TCCTTCTGAATATTGTAATCGGCCAAAGTTCGGCCATCTTCCAGTTGCTTACCGGCGAAG 642845 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || | ||||||||| | ||| | || |||||||| | ||| |||||| || | | Sbjct 642846 ATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGT-CTTGAATTTTTGCCTTCACGTT 642904 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || || | |||||||| || || || | ||||| || Sbjct 642905 ATCAATAGTGTCACTGCTCTCAACCTCCAGGGTGATGGTCTTTCCAGTCAAGGTCTTGAC 642964 Query 42197 AAAGATTTGCAT 42208 || || ||||| Sbjct 642965 GAAAATCTGCAT 642976 >seq1027 Length=3367805 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| ||||| || |||||||| ||||| || || || | || || Sbjct 416399 CACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCAAGTGTGCGGCCATCCTC 416458 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||| || ||||| || || || | ||||||||||| || | || ||||| ||| Sbjct 416459 TAGCTGTTTTCCAGCAAAAATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTG 416518 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 ||| || |||| | | | ||||| |||| ||||| || | ||||| || Sbjct 416519 GATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTC---TCCACTTCCAGTGTGATTGT 416575 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||||||||| || ||||| Sbjct 416576 CTTGCCAGTGAGGGTCTTTACAAATATCTGCAT 416608 >seq707 Length=3952773 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||| || || ||||| || | || ||||||||||| || ||||| Sbjct 1981755 TCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCGGCGAAG 1981814 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 1981815 ATCAGTCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 1981874 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || || || || || | || || || || || ||||| || || || Sbjct 1981875 TCGATAGTATCAGAAGACTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGGGTTTTCACG 1981934 Query 42198 AAGATTTGCATTTT 42211 ||||| |||||||| Sbjct 1981935 AAGATCTGCATTTT 1981948 >seq41 Length=2736928 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || ||||| || | || || |||||||| || ||||| Sbjct 677276 TCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAG 677335 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 677336 ATCAGTCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 677395 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || || || || | || || || || |||||||| || || || Sbjct 677396 TCGATGGTGTCAGAAGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACG 677455 Query 42198 AAGATTTGCATTTT 42211 ||||| |||||||| Sbjct 677456 AAGATCTGCATTTT 677469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543171896076160