Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq33 95.1 1e-14 seq132 84.2 3e-11 >seq33 Length=1871104 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || || ||||| | ||| ||| ||| | ||| ||||| | || | || Sbjct 634311 CCCTCGTCTCGCGAGATCAACTCGTTAGAGAAAGTTAATCCCGGCATCAACCCGCGCTTT 634370 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 ||||||||||| ||||| |||||||||||||| || || || |||||||| || || ||| Sbjct 634371 TTTAGCCAAAATATGGCGCAAAAACTTCCAGAGAAAAATATCCCCTCCACGCATGCAAAA 634430 Query 119634 GCGAATAGACGCTCAGCAAAAG 119655 |||| || | |||||| |||| Sbjct 634431 GCGACAAGTCTCTCAGCGAAAG 634452 >seq132 Length=3907184 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | |||||||| || Sbjct 1134155 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGAGACC 1134100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588931650107200