Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq304 98.7 5e-16 >seq304 Length=2135540 Score = 98.7 bits (108), Expect = 5e-16 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| ||||| ||||| |||||||| || || | ||||| ||||| || || || Sbjct 1419037 TACCTTTCCTTTTGCCTCCTCCTTGATCAACATAACGGGCAGTATCATTAAACACCCGCA 1419096 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 |||||||||| | ||| | || ||| ||||| | | |||| | | ||||| | | Sbjct 1419097 ACATTGGAACAATACCATTAGATGTTCCATTTGTTCCACGAATATAGCTGCCTGTGGCAC 1419156 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC-- 26241 ||| | |||| || | ||| ||||| ||||| |||| ||| | ||||| || Sbjct 1419157 GAATGTTGTGAACAGAGACACCAATTCCTCCAGCTGATTTGCTAATGACAGCACACTCCT 1419216 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||| ||||| | || |||| || |||||| ||||||| Sbjct 1419217 TTAAA--GTATCATATATGCCTTCAATACTATCATCTTTCAT 1419256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253021422435800