Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq33 132 8e-25 >seq33 Length=1871104 Score = 132 bits (146), Expect = 8e-25 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | ||||||||||||||||| || || ||||| || || || |||||||| Sbjct 634635 GCCTCAGAGACTTGGACCTCCTTCATAAAACGACCGGCAAGATTTTCGAGAACGATGCCA 634694 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||| || ||||| ||||| || || ||||| ||| ||| | | || Sbjct 634695 TCAGAGGCGGCAAAGAAGGCAAGGACATGAGATATGAAGTGTTTCTCATCGGAGGTTAGG 634754 Query 796270 GAGACCCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 | |||| ||| | | | || || ||||||||||| || |||||||||||||| Sbjct 634755 GCCTCCCATTGG-CGGAGATCTTGAGATAGATCGACCTCCTCTGCAGTCCAAAAGGAGGC 634813 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 |||||| || |||||||| ||||||||| || |||| |||| ||||||| Sbjct 634814 CTCGGCTTTCTTGTACATTTCCCATATCTGTGGGTATTGGATTGGGAACA 634863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915605599644536