Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq100 123 2e-23 seq1476 122 8e-23 seq707 120 3e-22 seq169 120 3e-22 seq41 113 4e-20 seq1027 111 2e-19 seq167 107 2e-18 seq229 98.7 1e-15 seq596 86.0 6e-12 seq3739 84.2 2e-11 >seq100 Length=1654266 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||| || ||||| || ||||| ||| | | ||| | | | |||||||| Sbjct 554757 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCA-TCCTCGAG 554699 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | ||||||| ||||||||| || || ||||| |||||||| ||| Sbjct 554698 CTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGAT 554639 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||||| | ||| || || | ||||| ||| ||||| Sbjct 554638 CTTGGCCTTGACATTGTCTATTGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTCTTGCC 554579 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || |||||||| Sbjct 554578 AGTGAGGGTCTTCACAAAGATCTGCAT 554552 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||| || ||||| || ||||| ||| | | ||| | | | |||||||| Sbjct 547460 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCA-TCCTCGAG 547402 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | ||||||| ||||||||| || || ||||| |||||||| ||| Sbjct 547401 CTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGAT 547342 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || |||| | ||| || || | ||||| ||| || || Sbjct 547341 CTTGGCCTTGACATTGTCTATTGTATCGGAGCTCTCAACTTCCAAGGTGATGGTCTTCCC 547282 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || || ||||||||| Sbjct 547281 GGTGAGGGTCTTCACAAAGATCTGCATG 547254 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||| || ||||| || ||||| ||| | | ||| | | | |||||||| Sbjct 554529 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCA-TCCTCGAG 554471 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | ||||||| ||||||||| || || ||||| |||||||| ||| Sbjct 554470 CTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGAT 554411 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || |||| | ||| || || | ||||| ||| || || Sbjct 554410 CTTGGCCTTGACATTGTCTATTGTATCGGAGCTCTCAACTTCCAAGGTGATGGTCTTCCC 554351 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || || ||||||||| Sbjct 554350 GGTGAGGGTCTTCACAAAGATCTGCATG 554323 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| ||| || | | | || || |||||||| || Sbjct 548135 GTGGACTCCTTCTGGATGTTGTAATCTGCCAAAGTTCGGCCA-TCTTCCAGCTGCTTCCC 548077 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || || || || |||||||| |||||| ||| Sbjct 548076 TGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTT 548017 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || || | | |||||| || | ||||| ||| || || |||| ||| Sbjct 548016 CACATTGTCAATGGTATCAGAGCTCTCCACCTCCAGGGTGATGGTCTTCCCTGTCAAAGT 547957 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 547956 CTTCACAAAAATCTGCAT 547939 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| ||| || | | | || || |||||||| || Sbjct 555204 GTGGACTCCTTCTGGATGTTGTAATCTGCCAAAGTTCGGCCA-TCTTCCAGCTGCTTCCC 555146 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||| | || || || || |||||||| |||||| ||| Sbjct 555145 TGCAAAGATGAGCCTCTGCTGGACCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTT 555086 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || || | | |||||| || | ||||| ||| || || |||| ||| Sbjct 555085 CACATTGTCAATGGTATCAGAGCTCTCCACCTCCAGGGTGATGGTCTTCCCTGTCAAAGT 555026 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 555025 CTTCACAAAAATCTGCAT 555008 >seq1476 Length=5289327 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || || |||||| ||| || | |||||| || || || || Sbjct 643007 GGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGTACGCCCGTCCTCTAGTTGTTTTCC 643066 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | || |||| ||||||||| || |||||||| |||||||| ||| |||||| | Sbjct 643067 GGCGAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCT-TGAATTTTTGCCT 643125 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| || ||| || |||| ||||| ||| || || |||| | Sbjct 643126 TCACGTTGTCAATAGTGTCGCTGCTCTCAACCTCGAGGGTGATGGTCTTCCCAGTCAAGG 643185 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 643186 TCTTAACGAAAATCTGCAT 643204 Score = 116 bits (128), Expect = 4e-21 Identities = 149/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| |||||||||||| ||| || | | | || |||||||| || | Sbjct 643463 GGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTACGGCCA-TCTTCGAGCTGTTTCC 643521 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||||||||||| || ||||| ||||| ||||| ||| ||| || Sbjct 643522 CGGCAAAGATAAGACGCTGCTGGTCTGGCGGGATACCTTCTTTGTCTTGGAT-TTTGGCT 643580 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | |||||| || ||| || |||| |||| || |||||||| || Sbjct 643581 TTGACGTTGTCGATGGTGTCGCTGCTCTCTACCTCGAGAGTGATAGTCTTGCCGGTGAGG 643640 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 643641 GTCTTAACGAAGATCTGCAT 643660 Score = 114 bits (126), Expect = 1e-20 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| |||||||||||| ||| || | | | || || || ||||| || Sbjct 642780 GTGGATTCCTTCTGAATATTGTAATCGGCCAAAGTTCGGCCA-TCTTCCAGTTGCTTACC 642838 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | || |||| ||||||||| || |||||||| |||||||| ||| |||||| | Sbjct 642839 GGCGAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCT-TGAATTTTTGCCT 642897 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| || ||| || || | ||||| ||| || || |||| | Sbjct 642898 TCACGTTATCAATAGTGTCACTGCTCTCAACCTCCAGGGTGATGGTCTTTCCAGTCAAGG 642957 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 642958 TCTTGACGAAAATCTGCAT 642976 >seq707 Length=3952773 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| |||||||| ||| | | ||| | | | ||||| |||||||| || Sbjct 1981749 GTGGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCA-TCCTCTAGCTGCTTTCC 1981807 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| |||||||||||||||||||| |||||| ||| Sbjct 1981808 GGCGAAGATCAGTCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTT 1981867 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | ||| || || | ||| | || || ||||| || || Sbjct 1981868 GACATTATCGATAGTATCAGAAGACTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGGGT 1981927 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 1981928 TTTCACGAAGATCTGCAT 1981945 >seq169 Length=810068 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| ||| |||| | | | || ||||||||||| || Sbjct 363899 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAACGTGCGTCCA-TCTTCGAGCTGCTTTCC 363841 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | | ||| |||||||| || || ||||||||||| |||||| ||| Sbjct 363840 AGCAAAGATCAATCTCTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTT 363781 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| | ||| || |||| || | ||| |||||||| ||||| Sbjct 363780 GACATTATCGATAGTATCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTGAGAGT 363721 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 363720 TTTCACGAAGATCTGCAT 363703 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || || ||||||||||||||| | | || | | | ||||| |||||||| || Sbjct 364127 GTGGATTCCTTTTGTATATTGTAATCGGCGAGGGTACGGCCA-TCCTCAAGCTGCTTACC 364069 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| |||| |||||||| ||||| || |||||||| || ||||| ||| Sbjct 364068 GGCGAAAATCAGCCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTT 364009 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| || | ||||||||||| || || Sbjct 364008 AACGTTGTCGATTGTGTCGGAGCTCTCGACCTCGAGAGTTATAGTTTTGCCGGTGAGGGT 363949 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || || ||||| Sbjct 363948 TTTAACAAAGATTTGCAT 363931 Score = 104 bits (114), Expect = 2e-17 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||| || || || |||||| | | || | | | ||||| |||||||| || Sbjct 364355 GTGGATTCTTTTTGGATGTTATAATCGGCAAGAGTCCGGCCA-TCCTCTAGCTGCTTTCC 364297 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| |||| | |||||||||||| || || || ||||||||||| ||| ||| || | Sbjct 364296 GGCGAAAATCAACCGCTGCTGGTCAGGTGGAATACCTTCCTTGTC-TTGAATTTTGGCTT 364238 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | | ||||| || | || | || |||||||| |||| Sbjct 364237 TGACATTATCAATTGTATCTGAGCTTTCCACCTCCAAAGTTATAGTCTTGCCGGTGAGAG 364178 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || |||||||||||| || Sbjct 364177 TCTTCACAAAAATCTGCATGCCT 364155 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| ||||| ||||| | | ||| ||| ||||| | ||||| | Sbjct 364583 GTTGATTCTTTCTGAATATTATAATCTGCAA--GTGTACGGCCATCCTCCAATTGCTTCC 364526 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-C 133580 | || |||| |||| |||||| || || || || ||||||||||| ||| ||| | | Sbjct 364525 CAGCAAAAATAAGCCTCTGCTGATCAGGTGGAATTCCTTCCTTGTC-CTGAATTTTAGCC 364467 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | |||| || || | |||||| || | |||| ||| || ||||||| Sbjct 364466 TTTACATTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGATGGTCTTTCCGGTCAAT 364407 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || ||||||||||| Sbjct 364406 GTCTTAACAAAAATCTGCAT 364387 >seq41 Length=2736928 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| || ||||| || ||||| ||| | | ||| | | | ||||| |||||||| | Sbjct 677269 GGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCA-TCCTCCAGCTGCTTTC 677327 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| |||||||| ||||||||||| |||||| || Sbjct 677328 CGGCGAAGATCAGTCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCT 677387 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | ||| || || | ||| | || || || || || | Sbjct 677388 TGACATTATCGATGGTGTCAGAAGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGG 677447 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 677448 TTTTCACGAAGATCTGCAT 677466 >seq1027 Length=3367805 Score = 111 bits (122), Expect = 2e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| || ||||| |||||||| || | | ||| | | | ||||| || Sbjct 416403 AAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCAAGTGTGCGGCCA-TCCTCTAG 416461 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || |||| |||| |||||||||||| || ||||||||||| || ||| Sbjct 416462 CTGTTTTCCAGCAAAAATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGAT 416521 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||| | | |||||| || | |||| || ||||| Sbjct 416522 CTTAGCCTTGACATTGTCTATGGTGTCAGAGCTCTCCACTTCCAGTGTGATTGTCTTGCC 416581 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| || ||||||||| Sbjct 416582 AGTGAGGGTCTTTACAAATATCTGCATG 416609 Score = 100 bits (110), Expect = 3e-16 Identities = 152/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||||||||||||||| || || || || | || | | |||| |||||| | Sbjct 416175 AAGTGGAGGGTGGACTCTTTCTGAATGTTATAGTCAGC-AT-GAGTACGACCGTCCTCAA 416232 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||| || || || |||| | || ||||||||| || |||||||| |||||||| ||| Sbjct 416233 GCTGTTTCCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT-TGA 416291 Query 133573 TCTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| |||| | | | |||| ||||| | | ||| || || | || | ||| || Sbjct 416292 ATTTTGGCTTTAACATTGTCAATGGTGTCAGAGCTCTCTACTTCCAAAGTAATGGTCTTC 416351 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || || |||||||||||| Sbjct 416352 CCTGTGAGGGTCTTCACAAAAATCTGCATG 416381 >seq167 Length=3484751 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | ||| | | | || || ||||||||||| Sbjct 2202983 GTTGACTCCTTCTGGATGTTGTAATCGGCTAATGTGCGGCCA-TCTTCAAGCTGCTTGCC 2203041 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || ||| || || || || || |||||||| || |||||| ||| Sbjct 2203042 GGCGAAGATCAACCTCTGTTGATCCGGTGGAATTCCTTCCTTATCTTGGATCTTGGCCTT 2203101 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || |||| | ||| || |||| || | || ||||||||||| || Sbjct 2203102 GACGTTATCAATTGTATCGGAGCTCTCGACCTCGAGAGTAATAGTCTTGCCGGTCAGGGT 2203161 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 2203162 TTTCACGAAGATCTGCAT 2203179 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| ||||| |||||| | | || ||| ||||| ||||| || Sbjct 2202527 GTCGATTCCTTCTGGATATTATAATCGGCGAGTGTTCTTCCGTCTTCGAGTTGCTTTCCA 2202586 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | |||||||||||| || || || ||||||||||| |||||| |||| Sbjct 2202587 GCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 2202646 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || |||| | |||||| || | || | || || |||||||| ||| Sbjct 2202647 ACGTTGTCGATAGTATCGGAGCTCTCCACCTCTAGCGTTATCGTCTTTCCGGTCAGGGTT 2202706 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 2202707 TTCACGAAGATCTGCAT 2202723 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||||||| ||||| || ||||| || | | ||| | ||||||||| Sbjct 1288372 AAATGCAAGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGCCCATCCTCGAGC 1288313 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| ||||||||| || || || || |||||||| |||| Sbjct 1288312 TGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATC 1288253 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | |||| ||||| | | ||| || || | ||||| ||| ||||| Sbjct 1288252 TTGGCTTTCACATTGTCAATGGTGTCAGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCA 1288193 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || | ||||| || || || ||||| Sbjct 1288192 GTTAAGGTTTTCACAAAGATTTGCAT 1288167 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||| || ||||| ||||| |||||| | | || ||| ||||| Sbjct 2202746 AAATGCAGTGTGGATTCCTTCTGAATATTATAATCGGCAAGGGTTCTTCCGTCTTCGAGT 2202805 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || | | ||||||||| || || || ||||||||||| |||| Sbjct 2202806 TGTTTTCCAGCGAAGATCAATCTCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATC 2202865 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | || || | | ||| || || | || | ||||||||| Sbjct 2202866 TTGGCCTTGACATTATCGATGGTATCAGAGCTCTCGACTTCAAGAGTAATGGTTTTGCCT 2202925 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||| || ||||| ||||||||| Sbjct 2202926 GTCAAAGTCTTAACGAAGATCTGCATG 2202952 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || |||||||| ||||| ||||| | | || || || ||| Sbjct 1288600 AAATGCAGAGTAGATTCTTTCTGAATATTATAATCTGCAAGAGTCCTTCCATCTTCAAGC 1288541 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | || ||||||||| || ||||| || ||||| || |||| Sbjct 1288540 TGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCTTGGATC 1288481 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||||| | | ||| || || | ||||| || || || Sbjct 1288480 TTGGCCTTGACATTATCAATTGTGTCAGAGCTCTCTACCTCCAAGGTGATTGTCTTTCCA 1288421 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || |||||||||||| Sbjct 1288420 GTAAGGGTCTTCACAAAAATCTGCATG 1288394 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| ||||| || || | | || | | | || || || || || || Sbjct 1288819 GTGGACTCTTTCTGGATATTATAGTCTGCAAGGGTTCGTCCA-TCTTCAAGTTGTTTACC 1288761 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | || || ||||| || || || || |||||||| ||| || ||| Sbjct 1288760 AGCAAAAATCAATCGTTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTAGCCTT 1288701 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||| || |||| ||| | |||||| || ||||| || Sbjct 1288700 CACATTGTCAATTGTGTCAGAGCTCTCAACCTCGAGGGTAATGGTTTTCCCTGTCAGGGT 1288641 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || ||||||||||| Sbjct 1288640 TTTGACAAAAATCTGCAT 1288623 >seq229 Length=2021663 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||||||| | | || | ||||| |||||||| || Sbjct 544398 GGTAGACTCCTTCTGGATATTGTAATCGGCAAGGGTCCTCCCATCCTCAAGCTGCTTCCC 544457 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | | |||||| || || ||||||||||||||||| ||| || ||| Sbjct 544458 AGCAAAAATCAATCTCTGCTGATCAGGTGGGATGCCTTCCTTGTCTTGGATTTTAGCCTT 544517 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | ||| || || | ||| | ||| ||||| || || || Sbjct 544518 AACATTATCAATAGTGTCAGAACTCTCAACCTCCAAGGTAATGGTCTTGCCAGTAAGGGT 544577 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 544578 CTTCACAAAGATCTGCATG 544596 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| || ||||| || ||||| || | | ||| | || || ||| Sbjct 545074 AAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGCCCATCTTCCAGC 545133 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| | || ||||||||| || |||||||| |||||||| |||| Sbjct 545134 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATC 545193 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | || || || | ||||| || || || Sbjct 545194 TTGGCCTTCACATTGTCTATTGTGTCAGAACTTTCAACTTCCAGGGTGATTGTCTTCCCT 545253 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||| || || || ||||||||| Sbjct 545254 GTCAGAGTCTTCACAAATATCTGCATG 545280 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| || ||||| || ||||| || | | ||| | || || ||| Sbjct 546973 AAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGCCCATCTTCCAGC 547032 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| | || ||||||||| || |||||||| |||||||| |||| Sbjct 547033 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATC 547092 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | || || || | ||||| || || || Sbjct 547093 TTGGCCTTCACATTGTCTATTGTGTCAGAACTTTCAACTTCCAGGGTGATTGTCTTCCCT 547152 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||| || || || ||||||||| Sbjct 547153 GTCAGAGTCTTCACAAATATCTGCATG 547179 >seq596 Length=4721113 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | | || ||| || ||||| || || Sbjct 1300479 GTCGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTCCTGCCGTCTTCCAGCTGTTTTCCA 1300538 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || || || ||||||||||| |||||| || Sbjct 1300539 GCGAAGATTAGACGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTC 1300598 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || |||| | ||| || |||| ||| | ||| || || || || ||| Sbjct 1300599 ACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTAATGGTCTTACCCGTTAGGGTT 1300658 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1300659 TTCACGAAGATCTGCAT 1300675 >seq3739 Length=230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || |||| | || ||||||||| || |||||||| |||||| Sbjct 209 TCTTCCAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTG 150 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||| | || || || | ||||| Sbjct 149 TCCTGGATCTTGGCCTTCACATTGTCTATTGTGTCAGAACTTTCAACTTCCAGGGTGATT 90 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || |||||||| || || || ||||||||| Sbjct 89 GTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATG 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483384398413760