Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq167 145 2e-29 seq1476 131 4e-25 seq169 120 7e-22 seq41 107 5e-18 seq596 102 2e-16 seq229 102 2e-16 seq100 96.9 8e-15 seq707 95.1 3e-14 seq1027 93.3 1e-13 seq222 87.8 4e-12 seq271 86.0 1e-11 >seq167 Length=3484751 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| ||||| || || ||||| || || || |||| |||||||| || || Sbjct 2202492 CAGATATTCGTGAAAACCCTAACTGGAAAGACTATAACGCTGGAGGTGGAAAGCTCCGAT 2202433 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| ||||||||||| || ||||| ||| || || || Sbjct 2202432 ACAATTGACAACGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAGCAG 2202373 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| |||||||||||||| |||||||||||| | || |||||||| || Sbjct 2202372 CGGTTAATCTTCGCTGGAAAGCAGTTGGAGGATGGAAGGACTCTTGCTGATTACAATATC 2202313 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || |||||||||||||||||| | || ||||| Sbjct 2202312 CAAAAGGAATCTACTCTTCACCTTGTTCTCAGGCTTCG 2202275 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || ||| | || || || || || || ||| | || Sbjct 2203164 AAAACCCTGACCGGCAAGACTATTACTCTCGAGGTCGAGAGCTCCGATACAATTGATAAC 2203105 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||||||| ||||| || || | |||||| Sbjct 2203104 GTCAAGGCCAAGATCCAAGATAAGGAAGGAATTCCACCGGATCAACAGAGGTTGATCTTC 2203045 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||| | || || |||||||||||| ||||||| ||||| Sbjct 2203044 GCCGGCAAGCAGCTTGAAGATGGCCGCACATTAGCCGATTACAACATCCAGAAGGAGTCA 2202985 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 2202984 ACACTCCACCTCGT 2202971 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || ||||| || ||||| ||||| || || || |||||| Sbjct 1288398 CAGATTTTTGTGAAGACCCTTACTGGAAAGACAATCACCTTGGAGGTAGAGAGCTCTGAC 1288457 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| ||||| ||||| || || || || || ||| || Sbjct 1288458 ACAATTGATAATGTCAAGGCCAAGATCCAAGATAAGGAGGGGATCCCACCAGACCAGCAG 1288517 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || |||||| | ||||||||||||||| | || ||||| || | Sbjct 1288518 AGGTTGATCTTTGCTGGGAAGCAGCTTGAAGATGGAAGGACTCTTGCAGATTATAATATT 1288577 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 |||||||| |||||||| || Sbjct 1288578 CAGAAAGAATCTACTCTGCA 1288597 Score = 109 bits (120), Expect = 1e-18 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| || | |||||||||||||||||| || || |||| ||| || ||||| | |||| Sbjct 2202275 CGAAGCCTGAGAACAAGGTGAAGAGTAGATTCCTTTTGGATATTGTAATCAGCAAGAGTC 2202334 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| |||| ||||||||| |||||||| | ||| || ||| Sbjct 2202335 CTTCCATCCTCCAACTGCTTTCCAGCGAAGATTAACCGCTGCTGA 2202379 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || ||||| ||||| || || | || || || || |||||| Sbjct 1288626 CAGATTTTTGTCAAAACCCTGACAGGGAAAACCATTACCCTCGAGGTTGAGAGCTCTGAC 1288685 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| || || || || || || || ||| |||||| ||| Sbjct 1288686 ACAATTGACAATGTGAAGGCTAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAACAA 1288745 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || || | ||||||||| | || | || || || || || Sbjct 1288746 CGATTGATTTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTTGCAGACTATAATATC 1288805 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| |||||||||||||| Sbjct 1288806 CAGAAAGAGTCCACTCTTCACCTTGT 1288831 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||| || ||||| || || || |||||||||||||| || ||||| || Sbjct 1287942 CAGATATTTGTCAAGACTCTCACTGGCAAGACTATCACTTTGGAAGTTGAGAGTTCGGAT 1288001 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || ||||| || || || ||| || || ||| Sbjct 1288002 ACCATCGATAATGTCAAGGCCAAAATACAAGACAAGGAGGGTATTCCACCAGATCAGCAA 1288061 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || || ||| | || ||||| | || | || || || || | Sbjct 1288062 AGATTGATTTTTGCTGGGAAACAGCTAGAGGATGGTCGCACACTTGCTGACTATAATATT 1288121 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| |||||| Sbjct 1288122 CAGAAAGAGTCTACGCTTCAC 1288142 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||||||||||| ||||||||| || | || | ||||||||| Sbjct 1288831 ACAAGGTGAAGAGTGGACTCTTTCTGGATATTATAGTCTGCAAGGGTTCGTCCATCTTCA 1288772 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || || || || || || || | |||||||| Sbjct 1288771 AGTTGTTTACCAGCAAAAATCAATCGTTGTTG 1288740 >seq1476 Length=5289327 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || ||||| || || |||||| |||||||||| || ||| ||| |||| Sbjct 642734 CAAGACCCTGACAGGGAAGACTATCACTCTGGAAGTGGAGAGCAGTGATACAATCGATAA 642675 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| || || || || || ||||| ||| || || ||||| || ||||| Sbjct 642674 TGTGAAGGCGAAAATCCAGGATAAGGAAGGGATTCCTCCAGATCAGCAAAGGCTGATCTT 642615 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||| || ||||||||| ||||||| ||||| |||||||||| || Sbjct 642614 TGCTGGGAAGCAGTTGGAGGACGGAAGGACTCTGGCCGACTACAATATCCAGAAAGAATC 642555 Query 206364 TACTCTTCACCTTGT 206378 || ||||||||||| Sbjct 642554 AACCCTTCACCTTGT 642540 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || || ||| |||| || |||||| ||| Sbjct 643429 CAGATCTTCGTCAAGACCTTGACTGGAAAGACTATTACTCTGGAGGTTGAAAGTAGCGAC 643370 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || ||||||||| || || || Sbjct 643369 ACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGATCAGCAG 643310 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || |||||||||||||| ||| | || || || | || ||||||||||||||| | Sbjct 643309 AGGCTGATCTTCGCCGGAAAACAGCTAGAGGACGGGCGTACCTTGGCCGATTACAACATT 643250 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 643249 CAGAAGGAGTCCACCCTTCACCTCGT 643224 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || ||||| |||| || || || |||| Sbjct 642973 CAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACCCTGGAGGTTGAGAGCAGTGAC 642914 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||| |||||||| || || || || || ||| || Sbjct 642913 ACTATTGATAACGTGAAGGCAAAAATTCAAGACAAGGAGGGCATCCCACCAGACCAGCAG 642854 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| ||||| |||||||||| | ||||||||||||||||| | Sbjct 642853 AGGCTGATCTTCGCCGGTAAGCAACTGGAAGATGGCCGAACTTTGGCCGATTACAATATT 642794 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || || ||||| |||||||| | || ||||| Sbjct 642793 CAGAAGGAATCCACTCTCCACCTTGTGCTCAGGCTTCG 642756 Score = 114 bits (126), Expect = 3e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || |||||| | || || || || ||||| |||| Sbjct 643645 AAGACCCTCACCGGCAAGACTATCACTCTCGAGGTAGAGAGCAGCGACACCATCGACAAC 643586 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||| || ||| ||| || | |||||||| Sbjct 643585 GTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCGCCAGACCAGCAGCGTCTTATCTT 643527 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || ||| | |||||||| | ||||||||||||||||| ||||||| ||||| Sbjct 643526 TGCCGGGAAACAGCTCGAAGATGGCCGTACTTTGGCCGATTACAATATCCAGAAGGAGTC 643467 Query 206364 TACTCTTCACCTTGT 206378 || |||||||| || Sbjct 643466 CACCCTTCACCTCGT 643452 Score = 96.9 bits (106), Expect = 8e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || || |||||||||| ||| ||||| |||| ||||||||| || ||| Sbjct 642540 ACAAGGTGAAGGGTTGATTCTTTCTGGATATTGTAGTCGGCCAGAGTCCTTCCGTCCTCC 642599 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||| || || ||||| |||| ||| ||| Sbjct 642600 AACTGCTTCCCAGCAAAGATCAGCCTTTGCTGA 642632 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 206247 AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGC 206306 || |||||| |||||||| || || || || || ||| || || || |||||||| Sbjct 643126 AAGGCAAAA-ATTCAAGACAAGGAGGGCATCCCACCAGACCAGCAGAGGCTGATCTTCGC 643068 Query 206307 CGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366 |||||| || | || || || | || ||||||||||| ||| | ||||| |||||||| Sbjct 643067 CGGAAAACAACTAGAGGACGGGCGTACCTTGGCCGATTATAACATTCAGAAGGAGTCTAC 643008 Query 206367 TCTTCACCTTGT 206378 ||||||||||| Sbjct 643007 CCTTCACCTTGT 642996 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| || | |||||||| ||||| || || ||||| | ||| || || |||||||| Sbjct 642756 CGAAGCCTGAGCACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCGGCCAAAGTT 642815 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 | ||||||||||| ||||| ||||||||||| |||| Sbjct 642816 CGGCCATCTTCCAGTTGCTTACCGGCGAAGATCAGCC 642852 >seq169 Length=810068 Score = 120 bits (132), Expect = 7e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || || |||||||| |||||||| || || Sbjct 364162 CAGATTTTTGTGAAGACTCTCACCGGCAAGACTATAACTTTGGAGGTGGAAAGCTCAGAT 364221 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| |||||||| || ||||| ||| || ||| || Sbjct 364222 ACAATTGATAATGTCAAAGCCAAA-ATTCAAGACAAGGAAGGTATTCCACCTGACCAGCA 364280 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || ||||||||||||||| | || ||||| ||||| | |||||||| ||| | Sbjct 364281 GCGGTTGATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGGACTCTTGCCGATTATAACAT 364340 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||| ||||| || ||||| || || ||| Sbjct 364341 CCAAAAAGAATCCACTCTGCATCTGGTT 364368 Score = 118 bits (130), Expect = 3e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || ||| | || || || || || |||||| |||| Sbjct 363946 AAAACCCTCACCGGCAAAACTATAACTCTCGAGGTCGAGAGCTCCGACACAATCGACAAC 364005 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||||||| || ||| ||||| || || ||| Sbjct 364006 GTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAAAGGCTGATTTTC 364065 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || ||||| | || | ||||||||||| | || || || || Sbjct 364066 GCCGGTAAGCAGCTTGAGGATGGCCGTACCCTCGCCGATTACAATATACAAAAGGAATCC 364125 Query 206365 ACTCTTCACCTTGTT 206379 |||||||| |||||| Sbjct 364126 ACTCTTCATCTTGTT 364140 >seq41 Length=2736928 Score = 107 bits (118), Expect = 5e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 || |||||| ||||| || ||||| || || || || ||||| || | || || Sbjct 677472 GCAAAAATG---CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTT 677416 Query 206221 GAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 || ||||||||| |||| || ||| ||||| || || || |||||||| Sbjct 677415 GAGTCTTCTGACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCT 677356 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || ||| || |||| |||||||||||||||||| |||| ||||| | ||| | ||| Sbjct 677355 CCAGACCAGCAGCGACTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTGCC 677296 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 || |||||| ||||||| || || || || ||||| || Sbjct 677295 GACTACAACATCCAGAAGGAATCCACCCTCCACCTGGT 677258 >seq596 Length=4721113 Score = 102 bits (112), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || || | || || || ||| || || |||| Sbjct 1300660 AAAACCCTAACGGGTAAGACCATTACCCTCGAGGTTGAGTCTTCCGATACCATCGACAAT 1300601 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| ||||| || ||||||||| |||||| || | || ||||| Sbjct 1300600 GTGAAAGCCAA-GATCCAAGACAAGGAAGGAATTCCACCGGACCAGCAGCGTCTAATCTT 1300542 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||| ||| ||||||| || ||||| | || || |||||| | ||||| ||||| Sbjct 1300541 CGCTGGAAAACAGCTGGAAGACGGCAGGACCCTCGCAGACTACAACATTCAGAAGGAGTC 1300482 Query 206364 TACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 1300481 GACTCTTCACCTGGT 1300467 >seq229 Length=2021663 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| ||||| || ||||| | || || || || |||||||| | || Sbjct 545720 AAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGAGCTCTGACACCATTGACAAT 545661 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || ||||||||||| || ||| || || | |||||| Sbjct 545660 GTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCAGACCAGCAGAGGTTGATCTTC 545601 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||||||||| | || | || || |||||| ||||||| || || Sbjct 545600 GCTGGAAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAACATCCAGAAGGAATCC 545541 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 545540 ACCCTGCAC 545532 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| ||||| || ||||| | || || || || |||||||| | || Sbjct 547619 AAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGAGCTCTGACACCATTGACAAT 547560 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || ||||||||||| || ||| || || | |||||| Sbjct 547559 GTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCAGACCAGCAGAGGTTGATCTTC 547500 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||||||||| | || | || || |||||| ||||||| || || Sbjct 547499 GCTGGAAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAACATCCAGAAGGAATCC 547440 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 547439 ACCCTGCAC 547431 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || || || ||||| || || ||||||||| Sbjct 544592 CAGATCTTTGTGAAGACCCTTACTGGCAAGACCATTACCTTGGAGGTTGAGAGTTCTGAC 544533 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || ||||| || ||||| || || || || Sbjct 544532 ACTATTGATAATGTTAAGGCTAAAATCCAAGACAAGGAAGGCATCCCACCTGATCAGCAG 544473 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || |||||| | || ||||| ||||| | ||||||||||| || Sbjct 544472 AGATTGATTTTTGCTGGGAAGCAGCTTGAGGATGGGAGGACCCTTGCCGATTACAATATC 544413 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| |||||||| | |||||||| || | ||||| Sbjct 544412 CAGAAGGAGTCTACCTTGCACCTTGTCCTGCGCCTTCG 544375 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || ||||| || || ||||| ||||||| |||||||||||| Sbjct 545276 CAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACCCTGGAAGTTGAAAGTTCTGAC 545217 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| ||||| || || || || || || || ||| || Sbjct 545216 ACAATAGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGACCAGCAG 545157 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || |||||| |||||||||| | || | || || |||||| || Sbjct 545156 AGGTTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAACATC 545097 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| || || || || ||| Sbjct 545096 CAGAAGGAATCCACCCTGCAC 545076 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || ||||| || || ||||| ||||||| |||||||||||| Sbjct 547175 CAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACCCTGGAAGTTGAAAGTTCTGAC 547116 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| ||||| || || || || || || || ||| || Sbjct 547115 ACAATAGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGACCAGCAG 547056 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || |||||| |||||||||| | || | || || |||||| || Sbjct 547055 AGGTTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAACATC 546996 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| || || || || ||| Sbjct 546995 CAGAAGGAATCCACCCTGCAC 546975 >seq100 Length=1654266 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || ||||| || || || ||||||||||||||||| || || ||||| | Sbjct 547036 TTTGTAAAGACACTCACTGGCAAGACAATCACTTTGGAAGTGGAGAGCTCAGACACCATT 547095 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 || ||||| ||||| || || || || || ||| || || || || ||| Sbjct 547096 GATAACGTAAAAGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAGAGGCTT 547155 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 ||||| || || || ||| | || ||||| | || | ||||| |||||| ||||||| Sbjct 547156 ATCTTTGCTGGCAAACAGCTTGAGGATGGCCGTACCCTTGCCGACTACAACATCCAGAAG 547215 Query 206359 GAGTCTACTCTTCAC 206373 ||||| || || ||| Sbjct 547216 GAGTCCACCCTCCAC 547230 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || ||||| || || || ||||||||||||||||| || || ||||| | Sbjct 554105 TTTGTAAAGACACTCACTGGCAAGACAATCACTTTGGAAGTGGAGAGCTCAGACACCATT 554164 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 || ||||| ||||| || || || || || ||| || || || || ||| Sbjct 554165 GATAACGTAAAAGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAGAGGCTT 554224 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 ||||| || || || ||| | || ||||| | || | ||||| |||||| ||||||| Sbjct 554225 ATCTTTGCTGGCAAACAGCTTGAGGATGGCCGTACCCTTGCCGACTACAACATCCAGAAG 554284 Query 206359 GAGTCTACTCTTCAC 206373 ||||| || || ||| Sbjct 554285 GAGTCCACCCTCCAC 554299 >seq707 Length=3952773 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 || |||||| ||||| || ||||| || || || || ||||| || | || || Sbjct 1981951 GCAAAAATG---CAGATCTTCGTGAAAACCCTAACCGGGAAGACGATAACCCTAGAGGTT 1981895 Query 206221 GAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 || |||||| || |||| || ||| ||||| || || || ||||| || Sbjct 1981894 GAGTCTTCTGATACTATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCT 1981835 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || ||| || |||| |||||||||||||||||| | || ||||| | ||| | ||| Sbjct 1981834 CCAGACCAGCAGCGACTGATCTTCGCCGGAAAGCAGCTAGAGGATGGCCGCACTCTTGCC 1981775 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| ||||||| || || ||||| ||||| || Sbjct 1981774 GACTACAATATCCAGAAGGAATCCACTCTCCACCTGGT 1981737 >seq1027 Length=3367805 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 206174 AGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA 206233 |||| ||| ||| || || | |||| || || || ||||| || || || || || Sbjct 416148 AGATTTTTGTCAAGACTCTTGCTAGAAAGACCATAACCTTGGAGGTTGATAGCTCAGATG 416089 Query 206234 CAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAA 206293 | | || || ||| ||||| ||||| || || ||| || || ||| |||| Sbjct 416088 CTATTGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGA-TTCCACCAGACCAGCAAA 416030 Query 206294 GACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCC 206353 | || ||||| || || ||||||||||| |||||| | || ||||| ||||||||| ||| Sbjct 416029 GGCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGACGCACCTTGGCTGATTACAACATCC 415970 Query 206354 AGAAAGAGTCTAC 206366 ||||||| || || Sbjct 415969 AGAAAGAATCCAC 415957 Score = 93.3 bits (102), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || ||||| ||||| | || ||||||||||| || Sbjct 416832 CAGATCTTTGTGAAGACACTTACTGGGAAAACCATCACACTTGAGGTGGAAAGTTCAGAT 416773 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| |||| || || || |||||||| || ||| || Sbjct 416772 ACTATCGACAATGTGAAAGC--CAGATCCAGGATAAGGAAGGAATCCCACCTGACCAGCA 416715 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| |||||||| || |||||||| | || ||||| | || | || ||||||||| | Sbjct 416714 AAGGCTTATCTTTGCTGGAAAGCAACTTGAGGATGGCCGCACACTTGCTGATTACAACAT 416655 Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373 ||| || || || || || ||| Sbjct 416654 CCAAAAGGAATCCACCCTCCAC 416633 >seq222 Length=1249109 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/100 (80%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 206271 AGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAG 206330 ||||||| |||||| || || | |||||||||||||||||| | |||||||| | Sbjct 595191 AGGAATTCCACCGGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCG 595132 Query 206331 GACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||||| |||||||| ||||||||| |||| ||||| Sbjct 595131 AACTTTGGCGGATTACAATATCCAGAAAG-GTCTGCTCTT 595093 >seq271 Length=609135 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 |||||| | || || || || || || ||||||||||| || ||| | || |||||||| Sbjct 324172 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTCTTGCAGATTACAAT 324113 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||| || || ||||||||| | |||||||| ||| || Sbjct 324112 ATCCAGAAGGAATCAACTCTTCACTTGGTTTTGAGGCTTAGA 324071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181729584116104