Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq100 140 3e-28 seq169 138 1e-27 seq167 134 1e-26 seq596 125 6e-24 seq229 114 1e-20 seq1476 109 5e-19 seq1027 105 6e-18 seq3739 84.2 2e-11 >seq100 Length=1654266 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || |||||| | || || ||||| |||||| || Sbjct 546799 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 546858 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||| ||||| ||||| || || || ||||| Sbjct 546859 GACACTATTGACAACGTAAAAGCCAAAATTCAGGACAAGGAAGGGATTCCCCCTGATCAG 546918 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || |||||||| |||||||| | ||| || | || || ||| Sbjct 546919 CAGAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGTACCCTTGCGGACTATAAC 546978 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | || |||||| | ||| | | ||||| || Sbjct 546979 ATTCAAAAGGAGTCAACCCTCCACTTGGTTCTCCGTCTTAGAGGTGGAAT 547028 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || |||||| | || || ||||| |||||| || Sbjct 553868 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 553927 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||| ||||| ||||| || || || ||||| Sbjct 553928 GACACTATTGACAACGTAAAAGCCAAAATTCAGGACAAGGAAGGGATTCCCCCTGATCAG 553987 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || |||||||| |||||||| | ||| || | || || ||| Sbjct 553988 CAGAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGTACCCTTGCGGACTATAAC 554047 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | || |||||| | ||| | | ||||| || Sbjct 554048 ATTCAAAAGGAGTCAACCCTCCACTTGGTTCTCCGTCTTAGAGGTGGAAT 554097 >seq169 Length=810068 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| ||||||||| |||| ||| | || |||||| || Sbjct 364158 CATGCAGATTTTTGTGAAGACTCTCACCGGCAAGACTATAACTTTGGAGGTGGAAAGCTC 364217 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | |||||| |||||||||||||| ||||| || ||||| || || Sbjct 364218 AGATACAATTGATAATGTCAAAGCCAAAATTCAAGACAAGGAAGGTATTCCACCTGACCA 364277 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | |||||| || || | || || | ||| || ||||||| || Sbjct 364278 GCAGCGGTTGATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGGACTCTTGCCGATTATAA 364337 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||| || || || | ||| ||||| | || | || ||||| || Sbjct 364338 CATCCAAAAAGAATCCACTCTGCATCTGGTTCTCCGGCTCCGCGGTGGAAT 364388 >seq167 Length=3484751 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || ||| |||| ||||| | |||||||||||||| || Sbjct 2202955 CGGCATGCAGATCTTCGTTAAGACTTTGACAGGCAAAACCATTACTCTTGAAGTCGAGAG 2202896 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | || || | ||||| || || |||||||| ||||| || ||||| || Sbjct 2202895 CTCTGATACCATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCGGA 2202836 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||| | || || | ||| || |||||| | |||||| | ||| || ||||||| Sbjct 2202835 CCAGCAGAGATTGATCTTCGCTGGAAAACAACTCGAAGACGGAAGAACCCTTGCCGATTA 2202776 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| || || | ||||||||| | |||||||| || || || Sbjct 2202775 TAATATTCAGAAGGAATCCACACTGCATTTGGTTCTCCGTTTGCGAGGAGGTAT 2202722 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| |||||||||||| |||||||||| || || || ||| Sbjct 2203179 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACTATTACTCTCGAGGTCGAGAGCTCC 2203120 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || || ||||| || ||||| || ||||| |||||| Sbjct 2203119 GATACAATTGATAACGTCAAGGCCAAGATCCAAGATAAGGAAGGAATTCCACCGGATCAA 2203060 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||||||| || | ||||| | || | ||||||||||| Sbjct 2203059 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACATTAGCCGATTACAAC 2203000 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | || | ||| | || || ||||| Sbjct 2202999 ATCCAGAAGGAGTCAACACTCCACCTCGTCCTCCGTCTCCGTGGCGGCAT 2202950 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| || || || ||| |||| || || || |||||| ||| Sbjct 2202495 ATGCAGATATTCGTGAAAACCCTAACTGGAAAGACTATAACGCTGGAGGTGGAAAGCTCC 2202436 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || ||||||||||| ||||| || || || ||||| Sbjct 2202435 GATACAATTGACAACGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 2202376 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| ||||| | ||| || || || ||||| || | ||| || | |||||||| Sbjct 2202375 CAGCGGTTAATCTTCGCTGGAAAGCAGTTGGAGGATGGAAGGACTCTTGCTGATTACAAT 2202316 Query 27168 ATTCAAAAGGAGTCGAC 27184 || |||||||| || || Sbjct 2202315 ATCCAAAAGGAATCTAC 2202299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| || |||||| |||| ||| | ||||| || || Sbjct 1287939 ATGCAGATATTTGTCAAGACTCTCACTGGCAAGACTATCACTTTGGAAGTTGAGAGTTCG 1287998 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| ||||| |||||||| || || || ||||| ||||| Sbjct 1287999 GATACCATCGATAATGTCAAGGCCAAAATACAAGACAAGGAGGGTATTCCACCAGATCAG 1288058 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || ||||| | || || || || || | || || || Sbjct 1288059 CAAAGATTGATTTTTGCTGGGAAACAGCTAGAGGATGGTCGCACACTTGCTGACTATAAT 1288118 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || | || ||||| | || | || ||||| || Sbjct 1288119 ATTCAGAAAGAGTCTACGCTTCACTTGGTGCTCCGACTCCGTGGTGGTAT 1288168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| | || |||||| | || || | || || || || Sbjct 1288167 ATGCAAATCTTTGTGAAAACCTTAACTGGCAAGACCATCACCTTGGAGGTTGAGAGCTCT 1288226 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| || || || || || || || Sbjct 1288227 GACACCATTGACAATGTGAAAGCCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAG 1288286 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || || | ||| || | || |||||| Sbjct 1288287 CAGAGGCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGGCGCACCCTTGCTGACTACAAC 1288346 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||||| |||||||| | ||| | || |||||||| Sbjct 1288347 ATTCAGAAGGAGTCCACCTTGCATTTGGTGCTTCGTCTCCGTGGTGGCAT 1288396 >seq596 Length=4721113 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||| || || || || | ||| Sbjct 1300675 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATTACCCTCGAGGTTGAGTCTTCC 1300616 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| || || |||||||| ||||| || ||||| || || Sbjct 1300615 GATACCATCGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGAATTCCACCGGACCAG 1300556 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| |||| | ||| || ||||| |||||||| | |||| | | || |||||| Sbjct 1300555 CAGCGTCTAATCTTCGCTGGAAAACAGCTGGAAGACGGCAGGACCCTCGCAGACTACAAC 1300496 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||||||||| | || |||| | || ||| | ||||| Sbjct 1300495 ATTCAGAAGGAGTCGACTCTTCACCTGGTGCTTCGCTTGAGAGGTGG 1300449 >seq229 Length=2021663 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || |||||||| || ||| | || || || ||||| ||| || Sbjct 545280 CATGCAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACCCTGGAAGTTGAAAGTTC 545221 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || ||||| || ||||| ||||| || || Sbjct 545220 TGACACAATAGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGACCA 545161 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || ||||||| | ||| || | || ||||| Sbjct 545160 GCAGAGGTTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAA 545101 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || ||||| | ||| | || |||||||| Sbjct 545100 CATCCAGAAGGAATCCACCCTGCACTTGGTCCTTCGTCTTCGTGGTGGCAT 545050 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| |||||||| || || ||| | || || ||||| || || || Sbjct 545736 CATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGAGCTC 545677 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || || || ||||||||||| || ||||| || || Sbjct 545676 TGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCAGACCA 545617 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||| || || || ||||||| | ||| || | || ||||| Sbjct 545616 GCAGAGGTTGATCTTCGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAA 545557 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || ||||| | ||| | || |||||||| Sbjct 545556 CATCCAGAAGGAATCCACCCTGCACTTGGTCCTTCGTCTTCGTGGTGGCAT 545506 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || |||||||| || ||| | || || || ||||| ||| || Sbjct 547179 CATGCAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACCCTGGAAGTTGAAAGTTC 547120 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || ||||| || ||||| ||||| || || Sbjct 547119 TGACACAATAGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGACCA 547060 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || ||||||| | ||| || | || ||||| Sbjct 547059 GCAGAGGTTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAA 547000 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || ||||| | ||| | || |||||||| Sbjct 546999 CATCCAGAAGGAATCCACCCTGCACTTGGTCCTTCGTCTTCGTGGTGGCAT 546949 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| |||||||| || || ||| | || || ||||| || || || Sbjct 547635 CATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGAGCTC 547576 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || || || ||||||||||| || ||||| || || Sbjct 547575 TGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCAGACCA 547516 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||| || || || ||||||| | ||| || | || ||||| Sbjct 547515 GCAGAGGTTGATCTTCGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTTGCAGACTACAA 547456 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || ||||| | ||| | || |||||||| Sbjct 547455 CATCCAGAAGGAATCCACCCTGCACTTGGTCCTTCGTCTTCGTGGTGGCAT 547405 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || |||||||| || ||| | || || | ||||| ||| || Sbjct 544824 CATGCAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACGTTGGAAGTTGAAAGCTC 544765 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || || || || || ||||| || ||||| ||||| ||||| Sbjct 544764 TGATACTATTGACAATGTGAAGGCCAAGATACAGGACAAGGAGGGCATCCCACCAGATCA 544705 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || || || | ||||| | ||| || | || ||||| Sbjct 544704 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACCCTTGCAGACTACAA 544645 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || || || ||| | || |||||| | ||| | || |||||||| Sbjct 544644 CATCCAGAAAGAATCCACCCTTCACTTGGTTCTACGTCTTCGTGGTGGCAT 544594 >seq1476 Length=5289327 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| |||| ||||| || || || | Sbjct 643660 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACTATCACTCTCGAGGTAGAGAGCAGC 643601 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| ||||| |||||||||||||| || || || || || Sbjct 643600 GACACCATCGACAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCGCCAGACCAG 643541 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| ||||| | ||||| | || | |||||||||| Sbjct 643540 CAGCGTCTTATCTTTGCCGGGAAACAGCTCGAAGATGGCCGTACTTTGGCCGATTACAAT 643481 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | || | ||| | || || ||||| Sbjct 643480 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGAGGCAT 643431 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||| || ||| |||||||||| || || ||| Sbjct 643433 CATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACTATTACTCTGGAGGTTGAAAGTAG 643374 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| ||| ||||| || || ||||| || || || ||||| Sbjct 643373 CGACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGATCA 643314 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||| ||||| | || ||| | ||| | |||||||||| Sbjct 643313 GCAGAGGCTGATCTTCGCCGGAAAACAGCTAGAGGACGGGCGTACCTTGGCCGATTACAA 643254 Query 27167 CATTCAAAAGGAGTCGACC 27185 |||||| |||||||| ||| Sbjct 643253 CATTCAGAAGGAGTCCACC 643235 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || || || || || || | Sbjct 643204 ATGCAGATTTTCGTTAAGACCTTGACTGGGAAGACCATCACCCTCGAGGTTGAGAGCAGC 643145 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||||||| || ||||| ||||| || || Sbjct 643144 GACACTATTGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGCATCCCACCAGACCAG 643085 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| |||||| | || ||| | ||| | ||||||| ||| Sbjct 643084 CAGAGGCTGATCTTCGCCGGAAAACAACTAGAGGACGGGCGTACCTTGGCCGATTATAAC 643025 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| |||||||| ||| Sbjct 643024 ATTCAGAAGGAGTCTACC 643007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA--CCGT 27045 |||||||| || || || || |||| || ||| | || || || || || || | || Sbjct 642976 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACCCTGGAGGTTGAGAGCAGT 642917 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||| | ||||| | || || ||||||||||||||| || ||||| ||||| || | Sbjct 642916 --GACACTATTGATAACGTGAAGGCAAAAATTCAAGACAAGGAGGGCATCCCACCAGACC 642859 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTAC 27164 | ||| | | || | |||||| || ||| ||||||| | ||| | || |||||||| Sbjct 642858 AGCAGAGGCTGATCTTCGCCGGTAAGCAACTGGAAGA-TGGCCGAACTTTGGCCGATTAC 642800 Query 27165 AACATTCAAAAGGAGTCGAC 27184 || ||||| ||||| || || Sbjct 642799 AATATTCAGAAGGAATCCAC 642780 >seq1027 Length=3367805 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || || || ||| | |||||| | ||||| || || Sbjct 416381 CATGCAGATTTTTGTGAAGACCCTCACAGGGAAGACCATTACTTTGGAAGTAGAGAGCTC 416322 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| |||||||||||||| || ||||| || || || || Sbjct 416321 TGACACCATTGACAATGTTAAAGCCAAAATTCAAGACAAGGAGGGCATCCCCCCAGACCA 416262 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || ||||| | || ||| || || | | || || || Sbjct 416261 GCAGAGGTTGATTTTTGCAGGGAAACAGCTTGAGGACGGTCGTACTCATGCTGACTATAA 416202 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || ||||| ||| | || ||||| | || | || |||||||| Sbjct 416201 CATTCAGAAAGAGTCCACCCTCCACTTGGTGCTTCGCCTTCGTGGTGGCAT 416151 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||||||||| || || || |||||| | || || || |||||||| || Sbjct 416609 CATGCAGATATTTGTAAAGACCCTCACTGGCAAGACAATCACACTGGAAGTGGAGAGCTC 416550 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || || || |||||||| || ||||| || Sbjct 416549 TGACACCATAGACAATGTCAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCA 416490 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || ||||| | || || | || || | || ||||| Sbjct 416489 GCAGAGGCTGATTTTTGCTGGAAAACAGCTAGAGGATGGCCGCACACTTGCTGACTACAA 416430 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | || ||||| | || | || |||||||| Sbjct 416429 TATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGACTCCGAGGTGGCAT 416379 >seq3739 Length=230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || |||||||| || ||| | || || || ||||| ||| || Sbjct 54 CATGCAGATATTTGTGAAGACTCTGACAGGGAAGACAATCACCCTGGAAGTTGAAAGTTC 113 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || ||||| || ||||| ||||| || || Sbjct 114 TGACACAATAGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGACCA 173 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | || || | || ||||| || ||||||| Sbjct 174 GCAGAGGTTGATTTTTGCTGGCAAGCAGCTGGAAGA 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434885650644480