Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq131 82.4 6e-11 >seq131 Length=2543905 Score = 82.4 bits (90), Expect = 6e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 || || || ||||||||||||||||| || |||| ||| |||| ||| ||||| | |||| Sbjct 572480 TTGAATGGCACACCCAGACCCATGTCAGCAGATCGCTGATACATTTGACAAGACAACTCC 572421 Query 118645 CCGTTTGCAACATAAAACTG 118664 ||||| || ||||| ||||| Sbjct 572420 CCGTTGGCTACATAGAACTG 572401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414446370149536