Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jatropha_20curcas_20[refseq_20GCF_5F000696525.1_202014-06-02] 6,024 sequences; 318,527,106 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq271 86.0 5e-12 >seq271 Length=609135 Score = 86.0 bits (94), Expect = 5e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 111193 GACAAAGAAGGCGTTCCCGTC-GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGA 111251 ||||| ||||| | |||| | ||||||||||| | |||| ||| || ||||||||||| Sbjct 324199 GACAAGGAAGG-GATCCCTCCTGATCAACAAAGATTGATTTTTGCTGGTAAACAATTGGA 324141 Query 111252 AGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111311 |||| || |||| | || ||||| ||||| || || ||||| || || || || || || Sbjct 324140 AGATGGTAGAACTCTTGCAGATTACAATATCCAGAAGGAATCAACTCTTCACTTGGTTTT 324081 Query 111312 G 111312 | Sbjct 324080 G 324080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421780231676224