Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq54992 163 6e-35 seq50617 152 1e-31 seq52220 104 5e-17 seq925 104 5e-17 seq55593 100 6e-16 seq2030 100 6e-16 seq1274 100 6e-16 seq978 100 6e-16 seq55754 98.7 2e-15 seq55646 98.7 2e-15 seq54950 98.7 2e-15 seq53059 98.7 2e-15 seq47135 98.7 2e-15 seq25457 98.7 2e-15 seq1800 98.7 2e-15 seq1576 98.7 2e-15 seq1465 98.7 2e-15 seq1371 98.7 2e-15 seq983 98.7 2e-15 >seq54992 Length=480207 Score = 163 bits (180), Expect = 6e-35 Identities = 341/501 (68%), Gaps = 8/501 (2%) Strand=Plus/Minus Query 230127 TAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCTGGTAAATCGTTTGCCGAGCGTCT 230186 ||| |||||| ||||||| | | ||| | || | | || || || ||||| | Sbjct 460291 TAAGAAGGCACAGTGGGCCCTGCGCTGGATCGACGGGGCCGAGTCCTTCGCTGAGCGCAT 460232 Query 230187 CGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTG 230246 |||||| | | |||||| |||||||| | || ||||| || |||||||||||||| || Sbjct 460231 CGTCGCTTTCGCGTGTGTAGAAGGTATCTTCTTCTCCGGAAGCTTCTGCGCCATCTTCTG 460172 Query 230247 GCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGA 230306 | || ||| || ||||||| || || | || |||||| | ||| || || Sbjct 460171 GTTGAAGAAGCGCGGCTTGATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCGCGAGA 460112 Query 230307 CGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTAC 230365 |||||| ||||| | |||| || || | | || || | | || ||||| Sbjct 460111 CGAGGGGCTCCACTGCGACTTCG-CGTGCCTGCTTTACTCTCTCTTGAAAAAAAAGCTG- 460054 Query 230366 CATTCGAGACGG--TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCAT 230423 | | | | | |||| |||||| || || || || | ||| | |||||| | Sbjct 460053 -AGTGAACAGCGCATCAAGGGAATCATCCGCGACGCGGTGGACATCGAGAGAGAGTTCGT 459995 Query 230424 TTGTGACGCTATTCCATGTCGCCTTATTGGCA-TGAACGCTGAACTTATGGGACAGTACA 230482 || ||||| | |||||| || || ||| | |||||| || || ||| | ||||||| Sbjct 459994 GTGCGACGCGCTGCCATGT-GCGTTGGTGGGAATGAACGGCGAGCTGATGAGCCAGTACA 459936 Query 230483 TCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTA 230542 |||||||||| |||||| | | || | ||| || || |||| ||| | |||||| Sbjct 459935 TCGAATTCGTGGCCGACAGGCTATTGGGTGCGCTAGGGTACGGGAAGATCTACAACGTCC 459876 Query 230543 AGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAA 230602 |||||||||| | | ||||||||||| ||| | |||||||||||||| ||||| || | Sbjct 459875 AGAACCCCTTCGATTGGATGGAGCTCATCTCGTTGCAAGGGAAGACCAATTTCTTTGAGA 459816 Query 230603 AGCGTGTCAGTGACTATCAGA 230623 || | ||| | || || |||| Sbjct 459815 AGAGAGTCGGGGAGTACCAGA 459795 >seq50617 Length=115889 Score = 152 bits (168), Expect = 1e-31 Identities = 323/468 (69%), Gaps = 17/468 (4%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || ||||| ||||||||| |||||| | ||| || ||||| || | || ||||| || Sbjct 92267 TCCTTTGCGGAGCGTCTCATCGCCTTCGCGTGCGTCGAAGGGATCTTCTTCTCCGGAAGC 92326 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 ||||||||||| || ||| || || || |||||||||| ||| | || ||| Sbjct 92327 TTCTGCGCCATATTCTGGTTGAAAAAGCGCGGGTTGATGCCTGGTCTCACCTTCTCCAAC 92386 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| | ||| || |||||||| || ||| | |||| || || | ||| || Sbjct 92387 GAGCTGATCTCCCGTGACGAGGGGCTGCATTGCGACTTCG-CGTGCCTGC-TATACACC- 92443 Query 230350 CTCCA---GAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTT 230403 |||| ||| ||||| | | ||| | ||||| ||| | || || || Sbjct 92444 CTCCTAAGGAAGAAGCTG--AGT-GAGCAGCGCGTCAAGGGGATCGTCCGCGACGCGGTG 92500 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGC 230462 || | ||| | ||||||| | || ||||| | ||||| ||| || ||| ||||||| Sbjct 92501 GAGATCGAGAGGGAGTTCGTGTGCGACGCGCTACCATG-CGCGTTGGTGGGGATGAACGG 92559 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 || || ||| | ||||||||||| ||||| ||||| | | || | || | || | Sbjct 92560 AGATCTGATGAGCCAGTACATCGAGTTCGTGGCCGATAGGCTCTTGGGCGCGTTCGGATG 92619 Query 230523 CGAGAAAG-TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAG 230581 || ||||| | ||||| | ||||||| |||| | |||||||| || ||| | |||| Sbjct 92620 CG-GAAAGATCTACAATGTTCAGAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAAG 92678 Query 230582 GGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG-AGGCCT 230628 |||||||||| |||||||||||| | ||| | || || ||| |||||| Sbjct 92679 GGAAGACCAATTTCTTCGAAAAGAGGGTCGGAGAGTACCAGAAGGCCT 92726 >seq52220 Length=53913 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 25589 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25648 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25649 CCCACGGTGGGC 25660 >seq925 Length=58640 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 19078 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19137 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19138 CCCACGGTGGGC 19149 >seq55593 Length=34576 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||| ||||||||||| || || |||| || ||||||||||||||||| Sbjct 31591 TGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 31650 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 31651 CCCCACGGTGGGC 31663 >seq2030 Length=39061 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||| ||||||||||| || || |||| || ||||||||||||||||| Sbjct 1066 TGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1125 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1126 CCCCACGGTGGGC 1138 >seq1274 Length=115426 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||| ||||||||||| || || |||| || ||||||||||||||||| Sbjct 6951 TGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 6892 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 6891 CCCCACGGTGGGC 6879 >seq978 Length=1549298 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||| ||||||||||| || || |||| || ||||||||||||||||| Sbjct 1544421 TGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1544362 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1544361 CCCCACGGTGGGC 1544349 >seq55754 Length=545368 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 480178 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 480237 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 480238 CCCACGGTGGGC 480249 >seq55646 Length=1502996 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 475647 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 475706 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 475707 CCCACGGTGGGC 475718 >seq54950 Length=699951 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 340155 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 340214 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 340215 CCCACGGTGGGC 340226 >seq53059 Length=74765 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 32963 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 32904 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 32903 CCCACGGTGGGC 32892 >seq47135 Length=4229 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 2468 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2409 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2408 CCCACGGTGGGC 2397 >seq25457 Length=576 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 559 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 500 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 499 CCCACGGTGGGC 488 >seq1800 Length=99409 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 37076 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 37135 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 37136 CCCACGGTGGGC 37147 >seq1576 Length=905477 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 172799 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 172858 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 172859 CCCACGGTGGGC 172870 >seq1465 Length=88486 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 38186 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 38245 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 38246 CCCACGGTGGGC 38257 >seq1371 Length=342934 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 147439 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 147380 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 147379 CCCACGGTGGGC 147368 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 148477 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 148418 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 148417 CCCACGGTGGGC 148406 >seq983 Length=2705936 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| ||||||||||| || || |||| || |||||||||||||||||| Sbjct 407545 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 407604 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 407605 CCCACGGTGGGC 407616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056390012793890