Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq54992 82.4 8e-11 >seq54992 Length=480207 Score = 82.4 bits (90), Expect = 8e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || || || ||||||| ||| || |||||||| || || Sbjct 460082 AGGCACGCGAAGTCGCAGTGGAGCCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTC 460141 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | || ||||| || || ||||| |||||||| || || ||| || || || || Sbjct 460142 AGACCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATGGC-GCAGAAGCTTCCGGAGAA 460200 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| ||||| || ||| | || ||||||| Sbjct 460201 GAAGATACCTTCTACACACGCGAAAGCGA 460229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510738035277960