Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq54143 91.5 1e-13 >seq54143 Length=39111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 ||||||||||| || || |||||||| || |||||| | || ||| | || | || ||| Sbjct 4919 CAGTTTTACGTGGCCAATGGTGAATTGTCATGCCAAATGTATCAGCGCTCTGCTGACATG 4860 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 |||||||| || || ||||||||||| ||||| ||||| || | ||| | || ||| Sbjct 4859 GGCCTTGGTGTGCCTTTCAACATTGCATCTTATGCTCTTCTGACATGCATGATTGCTCAT 4800 Query 19122 GTT 19124 ||| Sbjct 4799 GTT 4797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398988849954135