Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq55622 84.2 2e-11 >seq55622 Length=839323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 |||||||| ||||| || || || | || ||| |||||||||||||| || || | Sbjct 331529 ACATGAGCGATCATACATGTCAATAAAGCATAAGACGCAATGTTAAATGGAACACCAAGA 331588 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||||||||| || | ||||||| |||||| ||||||| |||| Sbjct 331589 CCCATATCAGCAGACCGCTGATACATTTGACATGAAAGCTCCCCAT 331634 Score = 84.2 bits (92), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 102188 GTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTA 102247 || || || ||||||||||||||||||||||||||||| |||| ||||||||||||| || Sbjct 333303 GTTGAGCCACTGATAAACCACAACAGTTCTTCAACAACTCCTCGCCAAAATACTCTC-TA 333361 Query 102248 GTAGTT 102253 ||| || Sbjct 333362 GTAATT 333367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360785375947553