Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq49365 150 2e-31 seq1014 116 3e-21 seq54980 113 4e-20 seq49028 113 4e-20 seq24692 113 4e-20 seq50979 105 6e-18 seq1025 105 6e-18 seq1868 96.9 3e-15 seq55116 93.3 4e-14 seq54652 89.7 4e-13 seq3052 87.8 2e-12 seq54996 84.2 2e-11 >seq49365 Length=33059 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | |||||||||||||| || ||||| || || Sbjct 27671 CCACCGCGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATATTATAATCGGCG 27612 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||||||||| ||||| || ||||||| |||||||||||| ||| Sbjct 27611 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCCGGGGGG 27552 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || || | |||| Sbjct 27551 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCCACC 27492 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| || ||||| || || || || ||||| || ||||||||| Sbjct 27491 TCCAGGGTGATCGTCTTCCCTGTCAAGGTCTTGACGAAGATTTGCATT 27444 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| ||||| || ||||| || ||||| || ||||||||||||| ||||| Sbjct 27413 GTCGACTCCTTCTGAATATTGTAGTCGGCAAGGGTACGGCCGTCCTCCAGCTGCTTGCCG 27354 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||||||| || | || |||||||| |||||| || Sbjct 27353 GCAAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 27294 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || ||| | ||| |||| ||| || ||||| || || | ||| Sbjct 27293 ACATTATCGATGGTGTCAGAGCTCTCAACCTCCAAGGTGATCGTCTTTCCCGTGAGGGTT 27234 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 27233 TTGACGAAAATCTGCAT 27217 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||||||||| || |||||||| ||||| | | |||||||| || ||||| Sbjct 27869 GTAGACTCCTTTTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCCAGTTGCTTGCCG 27810 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || ||||||||||| || | || |||||||| |||||| ||| Sbjct 27809 GCAAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTC 27750 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| || | ||| ||||||||||| || | || Sbjct 27749 ACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 27690 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 27689 TTCACGAAGATCTGCAT 27673 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||| | || || ||||| || || || ||||| || Sbjct 27215 CCACCACGGAGACGGAGCACGAGATGGAGGGTTGATTCCTTCTGGATATTGTAGTCGGCG 27156 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| || ||||| || || || | || || |||||||||||| || Sbjct 27155 AGGGTCCTGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGG 27096 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| || || | | ||| || || | |||| Sbjct 27095 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACC 27036 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | ||||| || || |||||||| Sbjct 27035 TCGAGGGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 26989 >seq1014 Length=2264649 Score = 116 bits (128), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||||| ||||||| ||||| ||||||||||| |||||||||||||| | Sbjct 109279 TTCCACCACGCAGCCGAAGCACCAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCAG 109220 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || | || || || || || || ||| |||| | ||||||||||| | Sbjct 109219 CAAGAGTCCTTCCATCTTCTAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTG 109160 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TC 21124 | | || |||||||| |||||| ||||| | | | | ||||| ||| || || Sbjct 109159 GGATTCCCTCCTTGTCCTGAATCTTTGCCTTCACATTGTCTATAGTAT--CCGAGCTTTC 109102 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||| || || || || || | ||| || ||||| ||||||||| Sbjct 109101 AACTTCCAAGGTTATAGTTTTTCCTGTCAGCGTCTTCACAAAAATTTGCATT 109050 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||| ||||||||||| ||||| || |||||||| || | || || |||||| Sbjct 109937 TGCAAAGTAGACTCCTTTTGGATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGT 109878 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || ||||| | ||||| |||||||| ||| || | ||||||||||| |||||| Sbjct 109877 TTCCCCGCGAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGAATCTTT 109818 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 |||||| | | | || ||| ||| |||| |||||||||||| || || Sbjct 109817 GCTTTCACATTATCAATCGTGTCAGAACTCTCTACCTCCAAGGTAATGGTCTTCCCAGTC 109758 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || || || |||||||| ||||| Sbjct 109757 AATGTCTTCACAAATATCTGCAT 109735 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | ||||| || ||||| ||||||||||| |||| || | | || Sbjct 108806 AGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTATAGTCAGCCAAAGTGCGACCATCT 108747 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| | || || |||||||||||| || | ||| |||||||| Sbjct 108746 TCGAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCC 108687 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TCCGTTTCCACGGTAATGG 21141 ||| || ||| || | | | | ||| | ||| || ||| || | ||| || | Sbjct 108686 TGGATTTTGGCTTTTACATTGTCAATAGTGT--CCGAGCTTTCCACCTCAAGGGTGATTG 108629 Query 21142 TCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||| || || |||||||| ||||| Sbjct 108628 TCTTTCCGGTTAGAGTCTTAACAAATATCTGCAT 108595 >seq54980 Length=436967 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | || | || |||||||| || ||||||||||| || Sbjct 429129 CCGCCGCGGAGCCTGAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTATAGTCGGCT 429188 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 429189 AAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGCGGG 429248 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || ||| || ||| Sbjct 429249 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACC 429308 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||||| ||||| || || || ||||| Sbjct 429309 TCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 429355 >seq49028 Length=66169 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | || | || |||||||| || ||||||||||| || Sbjct 55028 CCGCCGCGGAGCCTGAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTATAGTCGGCT 54969 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 54968 AAGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCGGGCGGG 54909 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || ||| || ||| Sbjct 54908 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACC 54849 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||||| ||||| || || || ||||| Sbjct 54848 TCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 54802 >seq24692 Length=691 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | || | || |||||||| || ||||||||||| || Sbjct 268 CCGCCGCGGAGCCTGAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTATAGTCGGCT 209 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 208 AAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGCGGG 149 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || ||| || ||| Sbjct 148 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACC 89 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||||| ||||| || || || ||||| Sbjct 88 TCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 42 >seq50979 Length=594689 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 |||||||| || | || | || |||||||| || || || ||||| || ||||| || Sbjct 43778 AGCCTGAGGACAAGGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCTAGGGTCCGG 43837 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||| ||||| ||||| || | || || | |||||||||| || | ||| ||| Sbjct 43838 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 43897 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| || || | | ||| || || || ||| || | || Sbjct 43898 TTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTG 43957 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| ||||||| ||||||||||| || ||||| Sbjct 43958 ATAGTCTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 43995 >seq1025 Length=2429094 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| |||||||||||| || || || || |||||||| || | || || |||||| Sbjct 1182803 TGCAGAGTGGACTCCTTCTGTATATTGTAATCCGCCAGAGTCCTTCCATCTTCAAGCTGT 1182744 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || |||||| | ||||| |||||||| || || | ||||| ||||| |||||| Sbjct 1182743 TTACCCGCAAAGATAAGCCTCTGCTGATCTGGAGGTATTCCTTCTTTGTCCTGAATCTTT 1182684 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 |||||| | | | |||||| ||| |||| |||||||||||| || || Sbjct 1182683 GCTTTCACATTATCAATTGTATCAGAACTCTCGACCTCCAAGGTAATGGTCTTCCCAGTC 1182624 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || ||||| ||||| || ||||| Sbjct 1182623 AATGTTTTCACAAAGATCTGCAT 1182601 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||||| | ||||||| |||||||| || ||||||||||| || || || || Sbjct 1182371 CCTCCTCGCAAACGCAGCACCAAGTGCAAAGTCGATTCCTTTTGAATATTGTAATCGGCT 1182312 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| | ||| ||||| ||| |||| | ||||||||||| || Sbjct 1182311 AAGGTCCGTCCATCCTCTAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG 1182252 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||| ||||| | | | ||||| | ||| Sbjct 1182251 ATACCTTCTTTGTCTTGAATCTTAGCCTTCACATTATCAATGGTATCGGAGCTCTCAACC 1182192 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| |||||||| || || || || || |||||||| || |||||| Sbjct 1182191 TCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 1182144 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || || |||||||| ||||| || ||||| Sbjct 1181915 CCACCGCGGAGGCGGAGCACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAATCCGCA 1181856 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| || ||||| || || ||| | ||||| ||||||||||| || Sbjct 1181855 AGGGTCCGACCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 1181796 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TCCG 21126 | || |||||||| |||||| || || | | | ||| | ||| || || Sbjct 1181795 ATACCCTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATAGTGT--CCGAGCTTTCGA 1181738 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||| || || || | ||||| ||||| |||||||| Sbjct 1181737 CCTCCAAAGTTATGGTTTTTCCAGTAAGGGTTTTAACAAAGATTTGCAT 1181689 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||||||| |||||| ||||||||||| |||||||| || || | Sbjct 1182145 TTCCTCCACGCAGACGAAGCACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGG 1182086 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | | || | || || | || || || ||| | || | |||||||| ||| | Sbjct 1182085 CTAATGTCCTTCCATCTTCTAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGTG 1182026 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TC 21124 | | || |||||||| ||||||| || || | | | |||| ||| || || Sbjct 1182025 GGATACCCTCCTTGTCTTGGATCTTTGCCTTGACATTATCTATGGTAT--CCGAGCTTTC 1181968 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| ||| || || || || || || || || ||||| |||||||| Sbjct 1181967 AACTTCCAAGGTTATAGTTTTTCCCGTCAAGGTCTTCACAAAGATTTGCAT 1181917 >seq1868 Length=298818 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| |||||||| |||||||| || ||||| || || || ||||| | | || Sbjct 224367 GAGCACCAGGTGCAAAGTCGACTCCTTCTGTATGTTGTAATCGGCGAGGGTACGCCCATC 224308 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||| || || || || | || || |||||||| || || | |||||||||||| Sbjct 224307 CTCCAATTGCTTCCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 224248 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| || || | | ||| ||||| ||| || | ||| ||||| Sbjct 224247 TTGGATCTTGGCCTTTACGTTGTCGATGGTATCGGAACTCTCGACCTCGAGGGTGATGGT 224188 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| ||||| | |||||||| || || ||||| Sbjct 224187 CTTCCCGGTGAGGGTTTTGACGAAGATCTGCAT 224155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||||||||||||||| || || || ||||| | | ||||||| || || || Sbjct 224579 GTTGACTCCTTTTGAATGTTGTAATCAGCTAGGGTACGCCCATCCTCCAATTGCTTCCCG 224520 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || || ||||||||| || | |||||||||||| ||||| ||| Sbjct 224519 GCAAAGATGAGCCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTC 224460 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| |||| || ||||| || || || || || Sbjct 224459 ACGTTGTCGATGGTGTCCGAGCTCTCCACCTCCAGAGTGATGGTTTTTCCTGTCAAGGTC 224400 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 224399 TTAACAAAGATCTGCAT 224383 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| |||||||||||||| || ||||| | | ||||||| || ||||| Sbjct 224123 GTGGACTCCTTCTGAATGTTATAGTCGGCAAGGGTGCGACCATCCTCCAATTGCTTGCCG 224064 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || || | ||||||||||| |||||| || Sbjct 224063 GCGAAGATCAGACGCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTG 224004 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || ||| || | ||| |||||||| ||||| | ||| Sbjct 224003 ACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTT 223944 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 223943 TTGACGAAGATCTGCAT 223927 >seq55116 Length=591887 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||| |||| ||||||||||| || || || || || ||||| | Sbjct 229969 TTCCACCACGGAGGCGGAGGACCAAGTGCAAAGTGGATTCTTTCTGGATATTGTAGTCAG 230028 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| ||| | | ||||| ||||| || || ||| | || | ||||||||| || | Sbjct 230029 CCAATGTTCGTCCATCCTCAAGCTGCTTTCCTGCAAATATCAATCTCTGCTGATCTGGAG 230088 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| |||||| |||||| | ||| || || || Sbjct 230089 GAATACCTTCCTTGTCTTGTATCTTTGCTTTCACATTATCGATTGTGTCTGAACTTTCAA 230148 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| ||| || ||||| || || | ||||| ||||| || ||||| Sbjct 230149 CTTCCAAGGTGATTGTCTTTCCTGTAAGAGTTTTAACAAAAATCTGCAT 230197 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || || || |||||||| || || || ||| || | ||||| || || || || Sbjct 230457 GTGGATTCTTTCTGGATGTTATAATCAGCTAGAGTTCGGCCATCCTCGAGTTGCTTTCCA 230516 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | ||||| ||||||||||| ||| | || |||||||| || ||| ||| Sbjct 230517 GCAAAGATAAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGTATTTTTGCTTTG 230576 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | ||||||| | |||| || | || |||||||| || || | || Sbjct 230577 ACGTTATCAATAGTATCAGAGCTCTCCACCTCGAGAGTTATGGTCTTTCCAGTAAGAGTC 230636 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 230637 TTGACAAAGATCTGCAT 230653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | || || | ||| | |||| ||| || |||||||| || || | Sbjct 229513 TTCCACCTCGTAGGCGAAGGACAAGATGTAGAGTGCTCTCTTTCTGAATGTTGTAATCTG 229572 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||||| || | || || || || || || ||| ||||||| ||||||||||| | Sbjct 229573 CCAGGGTGCGGCCATCTTCAAGTTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCTGGTG 229632 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTG--TTTCACCTGGCCGACAGTATCACCGGGCTC 21124 | | || ||||| || | | ||||| ||| || | | | |||||| | ||| Sbjct 229633 GGATCCCCTCCTTATC--CTGTATTTTGGCTTTGACATTATCAATCGTATCAGAGCTCTC 229690 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| |||||||| || || | || || ||||| || ||||| Sbjct 229691 CACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACAAAAATCTGCAT 229741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| ||| | ||| ||||| || || ||||| || || ||| Sbjct 229743 CCACCGCGAAGCCTGAGGACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 229802 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| || || || || ||| | || | ||||||||||| || Sbjct 229803 AATGTCCTGCCATCCTCAAGTTGCTTTCCAGCAAATATCAACCTCTGCTGGTCGGGAGGA 229862 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || || || ||||| | | | | |||||| | ||| Sbjct 229863 ATGCCTTCCTTATCCTGAATTTTCGCCTTCACATTGTCAATTGTATCAGAGCTCTCAACC 229922 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || || ||||| || || | || |||||||| ||||||||| Sbjct 229923 TCCAGAGTTATAGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCATT 229970 >seq54652 Length=76240 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | |||||||||||| || || || || || || | |||| || | ||| Sbjct 48131 AGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGCTAAGGTTCGGCCATCC 48072 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || || | || || | |||||||||| || | || |||||||| Sbjct 48071 TCGAGCTGTTTCCCAGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATACCCTCCTTGTCT 48012 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || || ||| || | ||| |||||| Sbjct 48011 TGGATCTTGGCCTTAACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTTATGGTC 47952 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || |||| ||||| || || || ||||| Sbjct 47951 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 47920 >seq3052 Length=4241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||||||||| || |||||||| ||||| | | |||||||| || ||||| Sbjct 4090 GTAGACTCCTTTTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCCAGTTGCTTGCCG 4149 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||| |||| || ||||||||||| || | || |||||||| |||||| Sbjct 4150 GCAAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTTGTCCTGGATCTT 4202 >seq54996 Length=250521 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 ||||||| | ||||| | || | || | || ||||||||||| |||||||| || | Sbjct 56699 TTCCCCCCCTAAGCCTCAAAACTAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCAG 56640 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || ||| | | || ||||| || || || ||| |||||||||| |||||||| | Sbjct 56639 CAAGAGTTCGACCATCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGGTCTGGAG 56580 Query 21067 GCACGCCTTCCTTGTC 21082 | | ||||||||||| Sbjct 56579 GGATACCTTCCTTGTC 56564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421714707713948