Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq55622 86.0 4e-12 >seq55622 Length=839323 Score = 86.0 bits (94), Expect = 4e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 ||||| ||||||||||| || |||| || ||| ||||||||||| || || || || Sbjct 331529 ACATGAGCGATCATACATGTCAATAAAGCATAAGACGCAATGTTAAATGGAACACCAAGA 331588 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239 ||||||||||| || | ||||| | ||||| ||||||| |||| ||||| ||| Sbjct 331589 CCCATATCAGCAGACCGCTGATACATTTGACATGAAAGCTCCCCATTGGCTACATAGAAC 331648 Query 97240 TG 97241 || Sbjct 331649 TG 331650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346336831026710