Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq55622 84.2 2e-11 >seq55622 Length=839323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||| | |||| | || || | | ||| ||||||||||| ||||| Sbjct 331522 ACCACAAACATGAGCGATCATACATGTCAATAAAGCATAAGACGCAATGTTAAATGGAAC 331581 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 || | |||||| || | |||| |||||||| ||||| |||||||| || | ||||| Sbjct 331582 ACCAAGACCCATATCAGCAGACCGCTGATACATTTGACATGAAAGCTCCCCATTGGCTAC 331641 Query 20359 ATAAAATTG 20367 ||| || || Sbjct 331642 ATAGAACTG 331650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440789067920520