Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Juglans_20regia_20[refseq_20GCF_5F001411555.1_202015-10-22] 105,803 sequences; 699,672,627 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq47040 145 2e-30 >seq47040 Length=8764 Score = 145 bits (160), Expect = 2e-30 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || || | |||||| | |||| ||| | ||| Sbjct 5687 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTACTGTTTTCTTGATCTATCCAATTGGT 5628 Query 29077 CAAGGTT-CTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCT 29135 ||||| ||||| | ||| | |||| | || ||||| || || ||||||| |||| | Sbjct 5627 CAAGGAAGCTTTTCTC-ACGGTAAGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGAT 5569 Query 29136 GGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGG 29195 || ||||| || || || ||||| || |||||||| || || ||| | || || ||||| Sbjct 5568 TGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGTGTAGCTGG 5509 Query 29196 AGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 || ||||| |||| ||||||||||| ||||| ||||| Sbjct 5508 TGTATTCGGCGGCTTCCTATTTAGTGCTATGCATGGTTC 5470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146481327781838