Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3554 87.8 1e-12 >seq3554 Length=9431 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 ||||| || ||||| ||||| || | | ||| ||| |||||||| || || || ||| Sbjct 3407 ACATGTGCAATCATGCAAGTCAACAACGCATATGAAGCTATGTTAAACGGAACACCAAGT 3348 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239 ||||| ||||||||||| ||||| | ||||| || | || ||| ||| ||||||||| Sbjct 3347 CCCATGTCAGCTGATCTCTGATACATTTGACAAGATAACTCTCCTTCATTTACATAAAAC 3288 Query 97240 T 97240 | Sbjct 3287 T 3287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343081182412700