Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04]
876,110 sequences; 1,133,657,130 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq40887 134 2e-26
seq27206 132 7e-26
seq86036 127 3e-24
seq75854 127 3e-24
seq48514 118 2e-21
seq309104 116 6e-21
seq35420 111 2e-19
seq102355 109 8e-19
seq171143 104 3e-17
seq97263 104 3e-17
seq468463 102 1e-16
seq341325 102 1e-16
seq246045 95.1 2e-14
seq57017 87.8 3e-12
seq90319 86.0 9e-12
seq78250 86.0 9e-12
>seq40887
Length=4418
Score = 134 bits (148), Expect = 2e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| |||||| | ||||| | || || || || || || | ||| |||| |||
Sbjct 2985 ATGCAGATATTTGTGAAGACGTTGACTGGAAAGACGATTACATTGGAGGTTGAGAGCTC- 3043
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || ||| |||| | ||| ||| ||||| ||||| ||||| || ||||| |||||
Sbjct 3044 TGACACGATTGATAATGTGAAAGCGAAGATTCAGGATAAGGAAGGAATCCCACCGGATCA 3103
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || | || |||||||| || || || |||||| |||| || | | ||||||||
Sbjct 3104 GCAGCGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGTACGCTTGCTGATTATAA 3163
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|||||| || || || ||||||||||||||| | || | || |||||
Sbjct 3164 TATTCAGAAGGAGTCGACTTTGCATTTGGTTCTCCGGCTTCGTGGTGG 3211
Score = 89.7 bits (98), Expect = 8e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || ||||||| || || || || || || ||| | || | || ||| |
Sbjct 1845 ATGCAGATCTTCGTAAAGACTCTCACCGGAAAGACGATCACTCTCGAAGTCGAGAGCTCA 1904
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| || | || ||||| || || || ||||| || || || || ||
Sbjct 1905 -GATACCATTGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGGATTCCCCCAGACCA 1963
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||||||||| || || ||||| || |||| || | || || || | ||||| ||
Sbjct 1964 ACAAAGGCTTATCTTCGCCGGAAAGCAGCTAGAAGACGGCCGCACCTTGGCCGATTACAA 2023
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||||||||| | || | ||| | || || |||| || ||
Sbjct 2024 CATCCAAAAGGAATCAACTCTTCACCTCGTTCTTCGATTGAGAGGAGGGAT 2074
Score = 86.0 bits (94), Expect = 9e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| || || || ||||| || || | || | |||
Sbjct 2301 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACAATCACCTTGGAAGTGGAAAGCTCC 2360
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| ||||| ||| | ||| ||||| ||||| ||||||||||| || || |||||
Sbjct 2361 GACACAATCGACAATGTCAAAGCTAAAATACAAGACAAAGAAGGTATTCCCCCAGATCAG 2420
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | ||||| || || |||||||| | || ||| | || || |||| || || ||
Sbjct 2421 CAACGACTTATCTTCGCCGGAAAACAGCTTGAAGATGGCCGGACCTTAGCTGACTACAAC 2480
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || || ||||| || | ||| | || | ||| | || || |||||
Sbjct 2481 ATCCAGAAGGAATCCACCCTCCATCTCGTCCTCCGTCTCCGTGGAGGTAT 2530
>seq27206
Length=5223
Score = 132 bits (146), Expect = 7e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | |||||| | ||||| || || || ||| ||||| |||| |||
Sbjct 2829 ATGCAGATTTTTGTCAAGACATTGACAGGGAAGACGATCACTCTAGAGGTTGAGAGCTCG 2770
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| |||| | || || ||||| || || || ||||| || ||||||||
Sbjct 2769 -GATACGATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGTATTCCGCCTGATCA 2711
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| |||||||| ||||| || || || | || ||| | || || || | ||||| ||
Sbjct 2710 ACAGAGGCTTATATTTGCTGGTAAGCAGCTTGAAGATGGGCGGACTTTGGCTGATTACAA 2651
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATT 124769
||||||||| || || ||| ||||| | ||| | ||| | |||||||| ||
Sbjct 2650 TATTCAAAAGGAGTCCACTCTGCATCTTGTTCTGCGTCTTAGAGGTGGTGTT 2599
>seq86036
Length=3019
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| |||| || ||||||||||| | ||| | ||| |
Sbjct 437 ATGCAGATCTTCGTGAAGACTTTAACGGGTAAAACTATAACGCTGGAGGTGGAAAGCTCT 378
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || ||||| || ||||| || || || ||||||||||||
Sbjct 377 GATACTATCGATAACGTGAAGGCTAAAATCCAGGATAAGGAGGGGATCCCACCTGATCAA 318
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | || |||||||| || ||||| || ||| |||| || |||| ||||||||
Sbjct 317 CAGAGGTTGATCTTTGCAGGGAAGCAATTGGAAGATGGTCGTACGTTAGCTGATTATAAC 258
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|| || || || || |||||||| | ||| | ||| | || ||||||
Sbjct 257 ATCCAGAAGGAGTCCACTTTGCACCTTGTTCTTCGTCTTCGTGGTGGT 210
Score = 105 bits (116), Expect = 1e-17
Identities = 117/155 (75%), Gaps = 1/155 (1%)
Strand=Plus/Minus
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
||||||| |||||||||||||| || || || ||||| |||||||| | | || ||
Sbjct 589 TTAAAACC-AAAATTCAAGATAAGGAGGGGATTCCACCGGATCAACAGCGATTGATCTTC 531
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| ||||||||| | |||||| | |||||| | | ||| ||||| || || || || ||
Sbjct 530 GCCGGAAAACAACTGGAGGATGGGCGAACACTTGCAGACTATAACATCCAGAAGGAGTCG 471
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| | || ||||| | ||| | || ||||||||
Sbjct 470 ACTCTCCACCTGGTTCTTCGTCTGCGCGGTGGTAT 436
>seq75854
Length=3247
Score = 127 bits (140), Expect = 3e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | |||||| | ||||| || || || ||| ||||| |||| |||
Sbjct 2339 ATGCAGATTTTTGTCAAGACATTGACAGGGAAGACGATCACTCTAGAGGTTGAGAGCTCG 2280
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| |||| | || || ||||| ||||| || ||||| |||||||||||
Sbjct 2279 -GACACCATTGATAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATTCCACCTGATCA 2221
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| |||||||| ||||| || || || | || ||| | | || || | ||||| ||
Sbjct 2220 GCAGAGGCTTATATTTGCTGGGAAGCAGCTTGAAGATGGGAGGACTTTGGCTGATTACAA 2161
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATT 124769
||||||||| || || |||||||| | || || ||| | |||||||| ||
Sbjct 2160 TATTCAAAAGGAGTCCACTTTGCACCTTGTCTTGCGTCTTAGAGGTGGTGTT 2109
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||| |||||||||||||| || |||||||| || || || || || || |||||
Sbjct 2711 AAGATTCAGGATAAAGAAGGTATTCCTCCTGATCAGCAGAGACTCATATTCGCCGGAAAG 2652
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| ||||| ||| | |||| |||| || || ||||| || || ||||| || | |||
Sbjct 2651 CAGTTAGAAGATGGCAGAACCTTAGCGGACTACAATATCCAGAAGGAATCCACCCTTCAT 2592
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
| || | || | || ||||| ||
Sbjct 2591 CTCGTCCTCCGCCTCCGTGGTGGAAT 2566
>seq48514
Length=4088
Score = 118 bits (130), Expect = 2e-21
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | |||||| | ||||| || || | ||| ||||| | || |||
Sbjct 2940 ATGCAGATTTTTGTGAAGACATTGACAGGGAAGACGACCACTTTAGAGGTAGAGAGCTCG 2881
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| |||| | || || ||||| ||||| || || || || ||||||||
Sbjct 2880 -GACACCATTGATAATGTGAAGGCAAAGATTCAGGATAAGGAGGGGATTCCGCCTGATCA 2822
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| |||||||| ||||| || || || | || ||| |||| || | ||||| ||
Sbjct 2821 ACAGAGGCTTATATTTGCTGGGAAGCAGCTTGAAGATGAGAGAACTTTGGCTGATTACAA 2762
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATT 124769
|||||||| |||||||||||||| | || | ||| | |||||||||||
Sbjct 2761 CATTCAAAAGGAATCAACTTTGCACCTTGTCCTTCGTCTTAGAGGTGGTATT 2710
>seq309104
Length=1068
Score = 116 bits (128), Expect = 6e-21
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| || ||||| ||||| || || | ||| |||| |||
Sbjct 541 ATGCAGATCTTCGTTAAGACTCTTACAGGGAAAACAATCACGTTGGAGGTTGAGAGCTCC 482
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|||| ||| ||| ||||||| |||||||||||||| || || || ||||||||||
Sbjct 481 A-ATACCATTGATAACGTTAAAACC-AAAATTCAAGATAAGGAGGGGATTCCACCTGATC 424
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
|||| ||| | || |||||| | || ||||| || ||| | |||| || | |||||||
Sbjct 423 AACATAGGTTGATCTTTGCAAGGAAGCAATTGGAAGATGGGTGAACTTTTGCTGATTATA 364
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
| || ||||| || || | ||| || | ||| | | | | || ||||||
Sbjct 363 ACATCCAAAAGGAGTCTAATTTACACCTTGTTCTGCATCTTCGTGGTGGT 314
>seq35420
Length=4697
Score = 111 bits (122), Expect = 2e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || |||||||| || || ||||||||||| ||||| ||| | || || || |||||
Sbjct 1990 AAGATCCAAGATAAGGAGGGAATACCACCTGACCAACAGAGGTTGATCTTCGCCGGAAAG 2049
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| | ||||| | || || | | ||||| || ||||| || ||||||||| | |||
Sbjct 2050 CAACTGGAGGACGGCCGTACTCTTGCTGATTACAACATTCAGAAGGAATCAACTCTCCAT 2109
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||| | ||||| ||||||||||
Sbjct 2110 TTGGTTCTTCGTTTGAGAGGTGGTAT 2135
>seq102355
Length=2708
Score = 109 bits (120), Expect = 8e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| |||| || |||||||||||| | ||| | ||| |
Sbjct 1313 ATGCAGATCTTTGTGAAGACTTTAACGGGTAAAACTATAACTCTGGAGGTGGAAAGCTCT 1372
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || ||||| || ||||| || || || ||||| ||||||
Sbjct 1373 GATACTATCGATAACGTGAAGGCTAAAATCCAGGATAAGGAGGGGATTCCACCGGATCAA 1432
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | || || || || || ||||| || ||| | ||||| || | ||||||||
Sbjct 1433 CAGCGATTGATCTTCGCCGGGAAGCAATTGGAAGATGGGCGAACTTTGGCTGATTATAAC 1492
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|| || || || || |||||||| | ||| | ||| | || ||||||
Sbjct 1493 ATCCAGAAGGAGTCCACTTTGCACCTTGTTCTTCGTCTTCGTGGTGGT 1540
Score = 105 bits (116), Expect = 1e-17
Identities = 117/155 (75%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
||||||| |||||||||||||| || || || ||||| |||||||| | | || ||
Sbjct 1161 TTAAAACC-AAAATTCAAGATAAGGAGGGGATTCCACCGGATCAACAGCGATTGATCTTC 1219
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| ||||||||| | |||||| | |||||| | | ||| ||||| || || || || ||
Sbjct 1220 GCCGGAAAACAACTGGAGGATGGGCGAACACTTGCAGACTATAACATCCAGAAGGAGTCG 1279
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| | || ||||| | ||| | || ||||||||
Sbjct 1280 ACTCTCCACCTGGTTCTTCGTCTGCGCGGTGGTAT 1314
Score = 86.0 bits (94), Expect = 9e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | || || ||||| || || || |||||| | || | ||
Sbjct 629 ATGCAGATTTTTGTGAAAACCCTAACGGGGAAGACGATAACTCTCGAAGTCGAGAGTTCC 688
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| || ||| ||||||| ||| || || || || ||||| || || || |||||
Sbjct 689 GATACGATCGACAATGTTAAAAC-GAAGATACAGGACAAGGAAGGAATTCCTCCGGATCA 747
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | ||||| || || || ||||| | || || | || || | | ||||| ||
Sbjct 748 ACAACGTCTTATCTTCGCCGGTAAACAGCTCGAAGACGGCCGTACTCTCGCCGATTACAA 807
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| ||||||||||| || | ||| | ||| | ||| | || || || ||
Sbjct 808 TATCCAAAAAGAATCGACGCTCCATCTCGTTCTCCGTCTTCGTGGAGGCAT 858
>seq171143
Length=1869
Score = 104 bits (114), Expect = 3e-17
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| || | ||| || || || || | || ||| | |||
Sbjct 1396 ATGCAGATCTTCGTTAAGACCCTTATAGGGAAGACAATCACCTTGGAAATTAAGAGCTCC 1455
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| ||||||| ||||||||| |||| || || | ||||||||||
Sbjct 1456 -GACACCATTGATAACGTTAAAACC-AAAATTCAAAATAAGGAGGGGGTTCCACCTGATC 1513
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
||||||| | || |||||||| || |||| || ||| | | ||| |||| ||||||||
Sbjct 1514 AACAAAGATTGATCTTTGCAGGGAAGAAATTTGACGATGGGCAAACTTTAGCAGATTATA 1573
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
| || || || || || | |||||| | ||| | ||| | | ||||||
Sbjct 1574 ACATCCAGAAGGAGTCCAATTTGCACCTTGTTCTTCGTCTTTGTGGTGGT 1623
>seq97263
Length=2799
Score = 104 bits (114), Expect = 3e-17
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| || ||| | || || || || | ||| |||| |||
Sbjct 2163 ATGCAGATCTTCGTTAAGACCCTTACATGGAAGACAATCACCTTGGAGGTTGAGAGCTCC 2104
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| ||||||| ||||| |||||||| || || || ||||||||||
Sbjct 2103 -GACACCATTGATAACGTTAAAACCAAAAAT-CAAGATAAGGAGGGGATTCCACCTGATC 2046
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
|||| ||| | || ||| || | || || || || ||| | ||||| || | |||||||
Sbjct 2045 AACAGAGGTTGATCTTTACAAGGAAGCATTTGGAAGATGGGCGAACTTTGGTTGATTATA 1986
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
| || || || || || | |||||| | ||| | ||| | || ||||||
Sbjct 1985 ACATCCAGAAGGAGTCCAATTTGCACCTTGTTCTTCGTCTTCGTGGTGGT 1936
>seq468463
Length=658
Score = 102 bits (112), Expect = 1e-16
Identities = 165/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| | ||||| || || || || | ||| |||| |||
Sbjct 244 ATGCAGATCTTCGTTAAGACCTTTACAGGGAAGACAATCACCTTGGAGGTTGAGAGCTCC 303
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| ||||||| |||||||||||||| || || || ||||||||||
Sbjct 304 -GACACCATTGATAACGTTAAAACC-AAAATTCAAGATAAGGACGGGATTCCACCTGATC 361
Query 124657 -AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|| | ||| | || |||| ||| || ||||| || ||| | |||| || | ||||||
Sbjct 362 AAATACAGGTTGATCTTTGTAGGGAAGCAATTGGAAGATGGGTGAACTTTGGCTGATTAT 421
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|| || || || ||||| | |||| | | ||| | ||| | || ||||||
Sbjct 422 AAGATCCAGAAGGAATCCAATTTGAACCTTGTTATTCGTCTTCGTGGTGGT 472
>seq341325
Length=960
Score = 102 bits (112), Expect = 1e-16
Identities = 149/204 (73%), Gaps = 5/204 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| | ||| | || || || || | ||| |||| |||
Sbjct 566 ATGCAGATCTTCGTTAAGACCTTTACAAGGAAGACAATCACCACGGAGGTTGAGAGCTCC 625
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| ||||||| |||||||||||||| || || || ||||||||||
Sbjct 626 -GACACCATTGATAACGTTAAAACC-AAAATTCAAGATAAGGAGGGGATTCCACCTGATC 683
Query 124657 -AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||| ||| | || |||||||| || |||||||| ||| | ||||| || | |||||
Sbjct 684 AAACAGAGGTTGATCTTTGCAGGGAAGCAATTAGAAGATGGGCGAACTTTTGCTAATTAT 743
Query 124716 AATATTCAAAAAGAATCAACTTTG 124739
|| || || || ||||| | ||||
Sbjct 744 AACATCCAGAAGGAATCCAATTTG 767
>seq246045
Length=1351
Score = 95.1 bits (104), Expect = 2e-14
Identities = 115/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC-AACAAAGGCTTATTTT 124672
||||||| ||||||||||||||||| || || ||||| |||| |||| ||| | || ||
Sbjct 290 TTAAAACC-AAAATTCAAGATAAAGAGGGGATTCCACCCGATCAAACATAGGTTGATCTT 348
Query 124673 TGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATC 124732
|||||| || ||||| || ||| | |||| || | ||| |||| || || || |||||
Sbjct 349 TGCAGGGAAGCAATTGGAAGATGGGAGAACTTTGGCTGATAATAACATCCAGAAGGAATC 408
Query 124733 AACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
| |||| | | ||| | ||| | | ||||||
Sbjct 409 CAATTTGAACCTTGTTATTCGTCTTCTTGGTGGT 442
>seq57017
Length=3783
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||| || || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct 1202 AAGATTCACGACAAGGAAGGTATTCCTCCTGATCAGCAAAGGCTTATTTTCGCCGGAAAG 1143
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| || || || | ||| | || || ||||||||||| ||||| ||| | ||
Sbjct 1142 CAGTTGGAAGAAGGCAAAACCCTGTCGGACTACAATATTCAAAAGGAATCCACTGTTCAC 1083
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
| || | ||| | |||||||| ||
Sbjct 1082 CTCGTCCTTCGTCTCCGAGGTGGGAT 1057
>seq90319
Length=2932
Score = 86.0 bits (94), Expect = 9e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | |||||| | ||||| || || || ||| | ||| | || |
Sbjct 941 ATGCAGATTTTCGTGAAGACATTGACAGGGAAGACGATTACTTTGGAGGTGGAGAGTTCT 882
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| |||| | || ||| ||||| || || || || || ||||| || |||
Sbjct 881 GACACGATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAA 822
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | || || || ||||| || | |||||| | || || || | |||||||||
Sbjct 821 CAGCGGTTGATCTTCGCCGGAAAGCAGCTGGAGGATGGGCGGACTTTGGCGGATTATAAT 762
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| || || || || ||| | ||| | || | ||| | || |||||
Sbjct 761 ATCCAGAAGGAGTCGACTCTTCATCTTGTCCTTCGTCTTCGTGGTGG 715
>seq78250
Length=3191
Score = 86.0 bits (94), Expect = 9e-12
Identities = 156/227 (69%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||| | || | || || || || |||||||| || || ||||| | ||
Sbjct 647 ATGCAA-TCTTCGTCAAAACCCTCACCGGCAAAACCATTACCTTAGAGGTCGAGAGTTCG 705
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | ||| || ||||| || ||||||||||| || ||||||||
Sbjct 706 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATTCCTCCTGATCAG 765
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|||||||| ||||| | || || || || |||||| | |||| | | || || |||
Sbjct 766 CAAAGGCTCATTTTCTCCGGCAAGCAGTTGGAGGATGGAAGAACCCTGGCGGACTACAAT 825
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| || || ||||| || | ||| | || | ||| | || |||||
Sbjct 826 ATCCAGAAGGAATCCACCCTTCATCTCGTCCTCCGTCTCCGTGGTGG 872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 747182718048000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |