Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq480218 84.2 2e-12 >seq480218 Length=637 Score = 84.2 bits (92), Expect = 2e-12 Identities = 124/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACT---TCAGAAGAAGGCAA 14590 ||| || ||||| |||| | |||||| ||||| |||||||| ||||| | | |||| Sbjct 347 AGTTAAGTGGTTCAACGAATCTAAAGGTTTTGGTTTTATCACACCATCAGATGGAAGCAA 288 Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650 |||| | || | ||| || || |||| ||| | || || ||| || | |||||| Sbjct 287 AGATGTTTTTGTTCATTTTTCTTCAATTCAAGGAAACGGGTTTAAAACATTAACTGAAGG 228 Query 14651 TCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAGTCAAT 14705 ||||| ||||||||||| || |||| || ||| |||| | ||||| ||| Sbjct 227 GCAAAATGTTGAATTTGAAATTCAAGATGGACAAAAAGGTCCTGCTGCAGTAAAT 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47963555868060