Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq230409 102 2e-17 seq125066 96.9 7e-16 >seq230409 Length=1439 Score = 102 bits (112), Expect = 2e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 361 TGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACT 420 ||||||||| |||||| |||||| ||||||| ||||||||||| |||||||||| ||| Sbjct 1198 TGGGTCGTGCAGGATTTGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACT 1257 Query 421 GAGCTAACGACCCAATTAGAT 441 ||||||||||||| |||||| Sbjct 1258 GAGCTAACGACCCTTTTAGAT 1278 >seq125066 Length=2368 Score = 96.9 bits (106), Expect = 7e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 361 TGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACT 420 ||||||||| |||||| |||||| ||||||| ||||||||||| |||||||||| ||| Sbjct 2066 TGGGTCGTGCAGGATTTGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACT 2125 Query 421 GAGCTAACGACCC 433 ||||||||||||| Sbjct 2126 GAGCTAACGACCC 2138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99656295095400