Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq253245 100 3e-16 >seq253245 Length=1313 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 6985 ATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGG 7044 |||||| || || | |||||| ||||| | || ||||| ||||| |||||||| Sbjct 940 ATCACCAGGTTTTAATAGTGCTGTATAAACAGAAAAATTAGCTTGAGAACCAGAATGAGG 999 Query 7045 TTGAACGTTTGCGAAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCT 7103 |||||| || || | | ||| | ||| | || ||| ||||| | |||||| | | | Sbjct 1000 TTGAACATTAGCATAGTCAGCATC-AAATAATTTTTTCGCACGATTAATTGCTAATTCTT 1058 Query 7104 CGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCAT 7163 | ||| ||| | | | | || ||||| || || || || || ||||| || || |||| Sbjct 1059 CTATTATATCCACATGTTCACAACCGCCGTAGTAGCGCTTTCCAGGATAACCTTCTGCAT 1118 Query 7164 ACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATAACAT 7202 |||| || || || ||||||||||| |||||||||| Sbjct 1119 ACTTATTAGTTAATTGTGAACCCTGTGCATTCATAACAT 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549281209335600