Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04]
876,110 sequences; 1,133,657,130 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq41265 192 9e-45
seq764 192 9e-45
seq63331 181 2e-41
seq56117 176 7e-40
seq271315 170 3e-38
seq84444 170 3e-38
seq124909 159 5e-35
seq89566 159 5e-35
seq32790 159 5e-35
seq66985 156 7e-34
seq267681 154 2e-33
seq59746 152 8e-33
seq73028 149 1e-31
seq276225 145 1e-30
seq30726 145 1e-30
seq204267 141 1e-29
seq66037 132 8e-27
seq131859 131 3e-26
seq158432 125 1e-24
seq355254 111 2e-20
seq214367 109 9e-20
seq46316 98.7 2e-16
seq114635 96.9 5e-16
>seq41265
Length=4399
Score = 192 bits (212), Expect = 9e-45
Identities = 202/266 (76%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || |||||||| | ||| || || |||||||| ||||| ||||| || || |||
Sbjct 450 GCAAAACGTCATCGAAAGGTTCTCCGGGACAACATCCAGGGAATTACCAAACCGGCGATC 509
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| |||| | ||||| || || |||||| || || || |||| ||||| | |
Sbjct 510 CGTCGTTTGGCCAGACGTGGCGGCGTTAAGCGTATCAGCGGTCTGATCTACGAAGAAACT 569
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||| | |||||||| || | | || |||| ||||||| | ||| ||||||
Sbjct 570 CGTGGTGTTCTCAAGATCTTTCTAGAAAATGTCATCCGTGATGCTGTTACCTACACCGAG 629
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || |||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct 630 CATGCTCGCCGGAAGACTGTCACCGCCATGGATGTCGTCTATGCTTTGAAACGTCAAGGA 689
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| |||| ||||| || ||||
Sbjct 690 CGTACCCTTTACGGTTTCGGTGGTTA 715
>seq764
Length=12682
Score = 192 bits (212), Expect = 9e-45
Identities = 190/246 (77%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
|||||| ||||||||||| |||||||||||||| || ||||| | |||||||||| ||
Sbjct 9248 TCTTCGTGATAACATCCAGGGAATCACCAAGCCCGCCATCCGAAGATTGGCTCGTCGAGG 9189
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| ||||||||| || ||| ||| |||||||||||| ||||| |||| | ||||||||
Sbjct 9188 AGGTGTCAAGCGTATCAGTGGCTTGATCTATGAAGAGACTCGTGGTGTTCTCAAGATCTT 9129
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|| ||| || ||| ||||| | ||| || || |||||| || ||||||||
Sbjct 9128 TCTTGAGAATGTCATCAGAGATGCCGTAACCTACACTGAACACGCTCGCCGCAAGACTGT 9069
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| | |||||| |||||||||| |||||||| || ||||||| | ||||| |||||
Sbjct 9068 TACTGCAATGGATGTCGTCTATGCTTTGAAACGACAGGGCCGTACCCTATATGGGTTTGG 9009
Query 16693 AAGTTA 16698
||||
Sbjct 9008 TGGTTA 9003
>seq63331
Length=3581
Score = 181 bits (200), Expect = 2e-41
Identities = 189/248 (76%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || ||||||||||| ||||||||||| || ||||| |||||||| | || ||
Sbjct 1824 TCTCCGGGACAACATCCAAGGTATCACCAAGCCGGCGATCCGCCGTCTGGCCAGACGAGG 1765
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| ||||||||| || ||| || |||| || |||| |||| ||||||||||||||
Sbjct 1764 AGGTGTCAAGCGTATCAGTGGCTTAATCTACGAGGAGACCCGTGGAGTTTTGAAGATCTT 1705
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|| ||| ||| |||| ||| || || || ||||| || ||| || || |||||
Sbjct 1704 TCTTGAGAACGTCATCCGTGACGCCGTCACATACACCGAACATGCTCGCCGGAAAACTGT 1645
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|||| |||||||| |||| ||||| ||||| || |||||||||| | || || |||||
Sbjct 1644 CACCGCCATGGATGTCGTATATGCTTTGAAGCGCCAAGGCCGTACTCTCTACGGATTTGG 1585
Query 16693 AAGTTAAT 16700
||||||
Sbjct 1584 TGGTTAAT 1577
>seq56117
Length=3812
Score = 176 bits (194), Expect = 7e-40
Identities = 195/260 (75%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| |||||| |||||||| || |||||||||||||| ||||||
Sbjct 1119 GCAAAGCGTCATCGCAAGGTTCTTCGCGATAACATTCAGGGAATCACCAAGCCTGCTATC 1060
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | || |||||| | || || || |||||| || ||| ||| |||||||||| | |
Sbjct 1059 AGAAGGCTCGCTCGTAGGGGAGGTGTGAAGCGTATCAGTGGTTTGATCTATGAAGAAACT 1000
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||| | |||||||| || ||| || ||| || ||| | || ||||||
Sbjct 999 CGTGGTGTTCTCAAGATCTTTCTAGAGAATGTCATCAGAGACGCTGTGACATACACCGAG 940
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| || || ||||| ||| |||||||| | || ||||| ||||| | ||||||
Sbjct 939 CACGCTCGCCGGAAAACTGTTACCGCCATGGATGTGGTTTATGCTTTGAAGAGACAAGGC 880
Query 16673 CGTAAGATTTATGGTTTTGG 16692
|||| |||| || || ||
Sbjct 879 CGTACCCTTTACGGGTTCGG 860
>seq271315
Length=1225
Score = 170 bits (188), Expect = 3e-38
Identities = 186/247 (75%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || ||||||||||| ||||||||||| || ||||| ||||| || | || ||
Sbjct 1222 TCTCCGGGACAACATCCAAGGTATCACCAAGCCGGCGATCCGCCGTCTAGCCAGACGAGG 1163
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| ||||||||| || ||| || | || || |||| |||| |||||||||||||||
Sbjct 1162 AGGTGTCAAGCGTATCAGTGGGTTAATATACGAGGAGACCCGTGGTGTTTTGAAGATCTT 1103
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|| ||| ||| |||| ||| || || || ||||| |||||| || || |||||
Sbjct 1102 TCTTGAGAACGTCATCCGTGACGCCGTCACATACACCGAACACGCTCGCCGGAAAACTGT 1043
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|||| |||||||| | || || || ||||| || |||||||||| | || || |||||
Sbjct 1042 CACCGCCATGGATGTTGTTTACGCTTTGAAGCGCCAAGGCCGTACTCTCTACGGATTTGG 983
Query 16693 AAGTTAA 16699
|||||
Sbjct 982 TGGTTAA 976
>seq84444
Length=3052
Score = 170 bits (188), Expect = 3e-38
Identities = 198/267 (74%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | | ||| ||||| ||||||||||| ||||| ||||| || ||
Sbjct 2239 GCAAAGCGTCACCGGAAAGTTCTCCGAGACAACATCCAAGGTATCACGAAGCCGGCGATT 2298
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| || |||| | | |||||||| |||||| || ||| | |||||||||| |
Sbjct 2299 CGACGATTGGCGAGGAGAGGTGGAGTTAAGCGTATCAGTGGGCTTATCTATGAAGAAACA 2358
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | |||||||| || ||| || |||| ||| || | || ||||||
Sbjct 2359 CGTGGTGTGCTTAAGATCTTTCTAGAGAATGTCATCCGTGACGCCGTGACTTACACCGAG 2418
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| || || ||||||||| |||||||| | || ||||| |||||||| || ||
Sbjct 2419 CACGCTCGCCGGAAAACTGTCACCGCCATGGATGTGGTTTATGCTTTGAAACGGCAGGGA 2478
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| ||||||| |||||| |||||
Sbjct 2479 CGTACTCTTTATGGATTTGGAGGTTAA 2505
>seq124909
Length=2370
Score = 159 bits (176), Expect = 5e-35
Identities = 195/266 (73%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | ||| ||||| |||||||| |||||||| ||||| || |||
Sbjct 1123 GCCAAGCGCCACCGTAAAGTTCTCCGAGACAACATCCAGGGAATCACGAAGCCGGCGATC 1064
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| |||| | || ||||| || |||||| || || | | || || ||||
Sbjct 1063 CGTCGTTTGGCCAGGCGAGGTGGTGTTAAGCGTATCAGCGGTCTCATATACGAGGAGACG 1004
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| | |||||||| ||| ||| |||||| | |||||| | ||| ||||||
Sbjct 1003 CGAGGTGTCCTCAAGATCTTTCTCGAGAACGTTATTCGTGATGCAGTAACCTACACCGAG 944
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || ||||| || | ||||| | || ||||| ||||| || |||||
Sbjct 943 CATGCTCGCCGGAAAACTGTGACTGCTATGGACGTGGTTTATGCCTTGAAGCGACAAGGT 884
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| |||||||||||||| ||||
Sbjct 883 CGTACTCTTTATGGTTTTGGAGGTTA 858
>seq89566
Length=2947
Score = 159 bits (176), Expect = 5e-35
Identities = 196/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || |||||||| | ||| || || ||||| || || ||||||||||| || |||
Sbjct 2558 GCCAAACGTCATCGTAAGGTTCTCCGGGACAACATTCAGGGTATCACCAAGCCGGCGATC 2499
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| | || || || ||||||||| || ||| || |||| || ||||
Sbjct 2498 CGCCGTCTGGCCAGACGAGGAGGTGTCAAGCGTATCAGTGGGTTAATCTACGAGGAGACC 2439
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||||||||||| || || | | || |||| ||| ||| || || || ||
Sbjct 2438 CGTGGAGTTTTGAAGATTTTTCTTGAAAATGTCATCCGTGACGCTGTCACATACACAGAA 2379
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || ||||| ||| | |||||| |||| ||||| ||||| || ||||||
Sbjct 2378 CATGCTCGCCGGAAAACTGTTACCGCTATGGATGTCGTTTATGCTTTGAAGCGCCAAGGC 2319
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| |||| || ||||| ||||||
Sbjct 2318 CGTACTCTTTACGGATTTGGTGGTTAAT 2291
>seq32790
Length=4849
Score = 159 bits (176), Expect = 5e-35
Identities = 183/246 (74%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || || || ||||| ||||||||||| || ||||||||||||||| | || ||
Sbjct 2488 TCTCCGGGACAATATTCAAGGCATCACCAAGCCGGCGATCCGTCGTCTGGCTAGACGAGG 2547
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| || |||||| || ||| || |||| || |||| |||| ||||||||||||||
Sbjct 2548 AGGTGTTAAGCGTATCAGTGGTTTAATCTACGAGGAGACGCGTGGAGTTTTGAAGATCTT 2607
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|| ||| ||| |||| ||| || || || ||||| || ||| || || |||||
Sbjct 2608 TCTTGAGAACGTCATCCGTGACGCCGTCACATACACCGAACATGCTCGCCGGAAAACTGT 2667
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
||| |||||||| |||| ||||| ||||| || || || |||| | || || |||||
Sbjct 2668 TACCGCCATGGATGTCGTTTATGCTTTGAAGCGCCAGGGTCGTACTCTCTACGGGTTTGG 2727
Query 16693 AAGTTA 16698
||||
Sbjct 2728 TGGTTA 2733
>seq66985
Length=3476
Score = 156 bits (172), Expect = 7e-34
Identities = 182/246 (74%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || |||||||| || || || ||||| || ||||| |||||||| | |||||
Sbjct 527 TCTCCGTGACAACATCCAGGGGATTACAAAGCCGGCGATCCGCCGTCTGGCGAGGCGTGG 586
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
||| || |||||| | || | |||||||||||| || | || || ||||||||
Sbjct 587 TGGCGTGAAGCGTATTAGCGGTCTTATCTATGAAGAGACACGAGGCGTGTTAAAGATCTT 646
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|||| ||| |||||| | ||| ||| | || |||||||||||| || || |||||
Sbjct 647 CCTCGAGAACGTTATTCGTGACGCTGTTACTTACACCGAGCACGCTCGTCGGAAAACTGT 706
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| |||||||| | |||||||| ||||| ||||| || || | | |||||||| ||
Sbjct 707 TACTGCCATGGATGTTGTCTATGCCTTGAAGCGTCAGGGACGAACTCTGTATGGTTTCGG 766
Query 16693 AAGTTA 16698
||||
Sbjct 767 TGGTTA 772
>seq267681
Length=1242
Score = 154 bits (170), Expect = 2e-33
Identities = 195/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||| | ||| || || ||||||||||| ||||||||||| || |||
Sbjct 397 GCCAAGCGACATCGTAAGGTTCTCCGGGACAACATCCAAGGCATCACCAAGCCGGCGATC 456
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| | || || || || |||||| || ||| || |||| || || |
Sbjct 457 CGCCGTCTGGCCAGACGGGGAGGTGTTAAGCGTATCAGTGGGTTAATCTACGAGGAAACC 516
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||||||||||||| || | | ||| |||| || || || || |||||
Sbjct 517 CGTGGAGTTTTGAAGATCTTTCTTGAAAACGTCATCCGCGACGCCGTCACGTACACCGAA 576
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || ||||| || |||||||| | || ||||| ||||| || ||||||
Sbjct 577 CATGCTCGCCGGAAAACTGTTACTGCCATGGATGTGGTATATGCTTTGAAGCGCCAAGGC 636
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | || || ||||| ||||||
Sbjct 637 CGTACTCTATACGGATTTGGTGGTTAAT 664
>seq59746
Length=3693
Score = 152 bits (168), Expect = 8e-33
Identities = 194/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || ||||| || | | ||| || || |||||||| || ||||| ||||| || ||
Sbjct 1088 GCAAAACGTCACCGGAAAGTTCTCCGTGACAACATCCAGGGTATCACAAAGCCGGCGATT 1147
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | ||||| || || |||||| | || | |||| || ||||
Sbjct 1148 CGCCGTCTTGCGAGGCGTGGCGGTGTTAAGCGTATAAGCGGTCTTATCTACGAGGAGACA 1207
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| ||||||||||||||| ||| |||||| | ||||||| | || ||||||
Sbjct 1208 CGTGGTGTGTTGAAGATCTTCCTCGAGAACGTTATTCGTGATGCTGTTACTTACACCGAG 1267
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| || || ||||| || | ||||| | |||||||||||||| ||||| ||
Sbjct 1268 CACGCTCGCCGGAAAACTGTTACTGCGATGGACGTTGTCTATGCATTGAAGCGTCAGGGT 1327
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || || || || |||||
Sbjct 1328 CGTACACTGTACGGATTCGGTGGTTAA 1354
>seq73028
Length=3316
Score = 149 bits (164), Expect = 1e-31
Identities = 189/260 (73%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | ||| || || ||||| ||||| ||||||||||| || |||
Sbjct 519 GCCAAGCGTCATCGGAAGGTTCTCCGGGACAACATTCAAGGCATCACCAAGCCGGCGATC 578
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| | || ||||| || |||||| || ||| || |||| || || |
Sbjct 579 CGCCGTCTGGCCAGGCGAGGTGGTGTTAAGCGTATCAGTGGCTTAATCTACGAGGAAACA 638
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||||||||||||| || ||| ||| |||| ||| || || || |||||
Sbjct 639 CGTGGGGTTTTGAAGATCTTTCTTGAGAACGTCATCCGTGACGCCGTCACGTACACCGAA 698
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || ||||| || ||||||| |||| || || ||||| || || |||
Sbjct 699 CATGCTCGCCGGAAAACTGTTACTGCCATGGACGTCGTTTACGCTTTGAAGCGCCAGGGC 758
Query 16673 CGTAAGATTTATGGTTTTGG 16692
|| | | || || |||||
Sbjct 759 CGCACTCTCTACGGATTTGG 778
>seq276225
Length=1202
Score = 145 bits (160), Expect = 1e-30
Identities = 193/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| || ||||| | ||| || || ||||||||||| ||||||||||| || |||
Sbjct 823 GCTAAACGACATCGTAAGGTTCTCCGGGACAACATCCAAGGCATCACCAAGCCGGCGATC 764
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| | || || || || |||||| || ||| || |||| || || |
Sbjct 763 CGCCGTCTGGCAAGACGAGGAGGTGTTAAGCGTATCAGTGGGTTAATCTACGAGGAAACC 704
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||||||||||||| || | | ||| |||| || || || || |||||
Sbjct 703 CGTGGAGTTTTGAAGATCTTTCTTGAAAACGTCATCCGCGACGCCGTCACATACACCGAA 644
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || ||||| || |||||||| | || ||||| ||||| || |||||
Sbjct 643 CATGCTCGCCGGAAAACTGTTACGGCCATGGATGTGGTATATGCTTTGAAGCGCCAAGGT 584
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | || || ||||| ||| ||
Sbjct 583 CGTACTCTATACGGATTTGGTGGTTGAT 556
>seq30726
Length=4978
Score = 145 bits (160), Expect = 1e-30
Identities = 193/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | ||| | ||||||||||| |||||||| |||||||| |||
Sbjct 1154 GCAAAGCGTCATCGGAAAGTTCTCAGGGATAACATCCAGGGAATCACGAAGCCAGCGATC 1095
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | ||||| | | || ||||| ||| | || || || ||||||||||||
Sbjct 1094 AGGAGACTGGCCAGGAGAGGAGGAGTGAAGAGGATCAGCGGTCTGATCTATGAAGAGACA 1035
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
| | ||||||||||||||| | ||| ||||| | ||||||| || ||| || |||
Sbjct 1034 AGAGGTGTTTTGAAGATCTTTTTGGAGAATGTTATTCGTGATGCTGTCACCTACACTGAG 975
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| | |||||||| || |||||||| | || ||||| ||||| | || ||
Sbjct 974 CACGCTCGTAGGAAGACTGTGACAGCCATGGATGTTGTGTATGCTTTGAAGAGGCAGGGA 915
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | ||||| || ||| ||||||
Sbjct 914 AGAACTTTGTATGGATTCGGAGGTTAAT 887
>seq204267
Length=1607
Score = 141 bits (156), Expect = 1e-29
Identities = 193/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||| | | ||| || || ||||| || || ||||| ||||| || |||
Sbjct 461 GCAAAGCGTCATAGGAAGGTTCTCCGTGACAACATTCAGGGGATCACGAAGCCGGCGATC 520
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| | | || || || |||||| || ||| ||| | || ||||||| |
Sbjct 521 CGTCGTCTGGCGAGGAGAGGGGGTGTGAAGCGTATCAGTGGTTTGATATACGAAGAGACT 580
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|||| || ||||||||||| | ||| || ||| || ||| || || || || ||
Sbjct 581 CGTGGAGTATTGAAGATCTTTTTGGAGAATGTGATCAGAGACGCTGTTACA-TACACAGA 639
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||| || || ||||| || |||||||| |||| ||||| ||||| | |||||
Sbjct 640 ACATGCTCGCCGGAAAACTGTTACAGCCATGGATGTCGTGTATGCGTTGAAGAGGCAAGG 699
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
||||| |||| || ||||| ||||
Sbjct 700 CCGTACTCTTTACGGATTTGGTGGTTA 726
>seq66037
Length=3503
Score = 132 bits (146), Expect = 8e-27
Identities = 190/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | ||| | ||||||||||| |||||||| ||||| || |||
Sbjct 362 GCAAAGCGTCATCGGAAAGTTCTCAGGGATAACATCCAGGGAATCACAAAGCCGGCGATC 421
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | ||||| | | || ||||| ||| | || ||| ||| |||| |||||||
Sbjct 422 AGGAGACTGGCGAGGAGAGGAGGAGTGAAGAGGATCAGTGGTTTGATCTACGAAGAGACG 481
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | |||| | |||||||| | ||| || || | ||||||| | ||| || ||
Sbjct 482 CGAGGTGTTCTCAAGATCTTTTTGGAGAATGTCATTCGTGATGCTGTTACCTACACTGAA 541
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| | |||||||| || |||||||| | || ||||| ||||| | |||||
Sbjct 542 CACGCTCGTAGGAAGACTGTGACAGCCATGGATGTTGTGTATGCTTTGAAGAGGCAAGGA 601
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | ||||| || ||| ||||||
Sbjct 602 AGAACTTTGTATGGATTCGGAGGTTAAT 629
>seq131859
Length=2279
Score = 131 bits (144), Expect = 3e-26
Identities = 177/247 (72%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
|||||| |||||||| ||||| ||||| ||||| || || | | | ||||| | ||
Sbjct 370 TCTTCGTGATAACATTCAAGGCATCACAAAGCCCGCCATTAGAAGGTTAGCTCGGAGAGG 429
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| ||||| ||| || ||| ||| | |||||||| | ||||| ||| | ||||| ||
Sbjct 430 AGGTGTCAAACGTATCAGTGGTTTGATATATGAAGAAACTCGTGGAGTTCTCAAGATATT 489
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
|| ||| || ||| || || | || |||||||| ||| || || |||||
Sbjct 490 TCTAGAGAATGTCATCAGAGACGCCGTTACTTACACCGAGCATGCTCGCCGGAAAACTGT 549
Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
||| |||||||| | || |||||||||||||| || || |||| | ||||| || ||
Sbjct 550 TACCGCCATGGATGTGGTTTATGCATTGAAACGACAGGGGCGTACTCTCTATGGATTCGG 609
Query 16693 AAGTTAA 16699
| |||||
Sbjct 610 AGGTTAA 616
>seq158432
Length=1987
Score = 125 bits (138), Expect = 1e-24
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | ||| ||||| |||||||| |||||||| || || || |||
Sbjct 1394 GCGAAGCGTCATCGTAAGGTTCTCCGAGACAACATCCAGGGAATCACAAAACCGGCGATC 1335
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| ||||| || | | || || || || ||| || || ||| |||| || || | |
Sbjct 1334 AGACGTCTTGCGAGAAGAGGAGGTGTGAAACGTATCAGCGGGTTGATCTACGAGGAAACT 1275
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | |||||||||||||| || ||| || ||| |||||| | ||| ||||||
Sbjct 1274 CGCGGAGTTTTGAAGATCTTTCTAGAGAATGTCATCAGAGATGCTGTTACCTACACCGAG 1215
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||||||| |||||||| | || || || | || | ||||||
Sbjct 1214 CACGCACGCCGGAAAACTGTCACCGCCATGGATGTGGTGTACGCGCTCAAGAGACAAGGC 1155
Query 16673 CG 16674
||
Sbjct 1154 CG 1153
>seq355254
Length=918
Score = 111 bits (122), Expect = 2e-20
Identities = 184/266 (69%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | ||| ||||| |||||||| |||||||| || || || ||
Sbjct 643 GCGAAGCGTCATCGTAAGGTTCTGCGAGACAACATCCAGGGAATCACAAAACCGGCGATA 702
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| | | || || || || ||| || || ||| |||| || || | |
Sbjct 703 CGACGTCTGGCGAGAAGAGGAGGTGTGAAACGTATCAGCGGTTTGATCTACGAGGAAACT 762
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| | |||||||| || | | || ||| |||||| | ||| || |||
Sbjct 763 CGCGGAGTTCTTAAGATCTTTCTAGAAAATGTCATCAGAGATGCTGTTACCTACACAGAG 822
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || |||||||| |||||||| | || || || | || | ||||||
Sbjct 823 CACGCACGCCGGAAAACTGTCACTGCCATGGATGTAGTGTACGCGCTCAAGAGACAAGGC 882
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698
|| | | ||||| || || ||||
Sbjct 883 CGAACTCTGTATGGATTCGGTGGTTA 908
>seq214367
Length=1538
Score = 109 bits (120), Expect = 9e-20
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| || ||| || |||| || |||| |||| |||||||||||||| || ||
Sbjct 1538 AAGCGTATCAGTGGGTTAATCTACGAGGAGACCCGTGGAGTTTTGAAGATCTTTCTTGAG 1479
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||| |||| ||| || || || ||||| || ||| || || || |||||| ||
Sbjct 1478 AACGTCATCCGTGACGCCGTCACATACACCGAACATGCTCGCCGGAAAACAGTCACCGCC 1419
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| ||||| || |||||||||| | || || ||||| |||||
Sbjct 1418 ATGGATGTTGTTTATGCTTTGAAGCGCCAAGGCCGTACTCTCTACGGATTTGGCGGTTAA 1359
>seq46316
Length=4176
Score = 98.7 bits (108), Expect = 2e-16
Identities = 182/267 (68%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || ||||| || | | || || || ||||| || ||||| || || || || ||
Sbjct 2833 GCAAAACGTCACCGGAAAGTACTCCGTGACAACATTCAGGGAATAACAAAACCGGCGATT 2892
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| | ||||| | | |||||||||||| | || |||||| | |||||||||| |
Sbjct 2893 CGGAGGTTGGCTAGAAGAGGTGGAGTCAAGAGAATCAGCGGATTGATTTATGAAGAGACT 2952
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | |||| | |||||||| | ||| || || | |||||| | || || |||
Sbjct 2953 CGAGGTGTTCTCAAGATCTTTTTGGAGAATGTGATTCGTGATGCGGTGACTTACACGGAG 3012
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| ||| || || || || || |||||||| | || || || | || | ||||||
Sbjct 3013 CATGCTCGCCGGAAAACGGTGACTGCCATGGATGTTGTATACGCTCTCAAGAGACAAGGC 3072
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | ||||| |||||| | |||
Sbjct 3073 CGAACTTTGTATGGATTTGGAGGCTAA 3099
>seq114635
Length=2515
Score = 96.9 bits (106), Expect = 5e-16
Identities = 180/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | ||| || |||||||| || |||||||| ||||||||||||
Sbjct 2013 GCAAAGCGTCATCGGAAAGTTCTCCGTGATAACATTCAGGGAATCACAAAGCCAGCTATC 1954
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | | || | | || || || ||| | || ||| || |||||||||| |
Sbjct 1953 AGGAGGTTAGCGAGGAGAGGAGGTGTAAAGAGGATCAGTGGTCTGATCTATGAAGAAACC 1894
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGC-TTTCCACTATACCGA 16611
| | ||| |||| ||||| | | | || || | |||||| || || || || ||
Sbjct 1893 AGAGGTGTACTGAAAATCTTTTTGGAAAATGTGATTCGTGATGCAGTTACA-TACACTGA 1835
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| ||| | | |||||||| || | |||||| | ||||| || |||| | |||||
Sbjct 1834 GCATGCTCGAAGGAAGACTGTAACTGCAATGGATGTTGTCTACGCTCTGAAGAGGCAAGG 1775
Query 16672 CCGTAAGATTTATGGTTTTGGA 16693
| | |||| || ||||||
Sbjct 1774 AAGGACTCTTTACGGATTTGGA 1753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78274166494230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |