Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq253245 87.8 2e-12 >seq253245 Length=1313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 7010 TTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCGAAATT-GCAACTAAACAGTTCTTT 7068 || || || ||||| ||||| |||||||| || || | | ||| | ||| | || ||| Sbjct 977 TTAGCTTGAGAACCAGAATGAGGTTGAACATTAGCATAGTCAGCATC-AAATAATTTTTT 1035 Query 7069 AGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCTTTTACACAACCGCCGTAATACCG 7128 ||||| | |||||| | | || || ||| | | | ||||||||||||| || || Sbjct 1036 CGCACGATTAATTGCTAATTCTTCTATTATATCCACATGTTCACAACCGCCGTAGTAGCG 1095 Query 7129 TTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAAC 7188 || || ||||| || || |||||||| || || || ||||| || || |||||||| Sbjct 1096 CTTTCCAGGATAACCTTCTGCATACTTATTAGTTAATTGTGAACCCTGTGCATTCATAAC 1155 Query 7189 AT 7190 || Sbjct 1156 AT 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547293617218800